Conservation of cofitness between PP_0951 and PP_4375 in Pseudomonas putida KT2440

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0951 Ribosome hibernation promoting factor 1.0 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.44 19
Pseudomonas simiae WCS417 0.83 PS417_04340 ribosome hibernation promoting factor HPF 0.75 PS417_19835 flagellar biosynthesis protein FliS low > 88
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_07040 hypothetical protein 0.61 AO356_03865 flagellar export chaperone FliS low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3268 Ribosome hibernation protein YhbH 0.61 Pf6N2E2_2599 Flagellar biosynthesis protein FliS low > 103
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1081 Ribosome hibernation protein YhbH 0.56 Pf1N1B4_3597 Flagellar biosynthesis protein FliS low > 87
Pseudomonas sp. RS175 0.80 PFR28_00172 Ribosome hibernation promoting factor 0.60 PFR28_00826 Flagellar secretion chaperone FliS low > 88
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_05185 hypothetical protein 0.70 AO353_18650 flagellar export chaperone FliS low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.64 Psyr_3463 Flagellar protein FliS low > 86
Pseudomonas sp. S08-1 0.78 OH686_08550 Ribosome hibernation promoting factor Hpf 0.54 OH686_02865 flagellar protein FliS low > 80
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.64 Psyr_3463 Flagellar protein FliS low > 86
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.75 PFLU_RS21805 flagellar export chaperone FliS low > 109
Pseudomonas fluorescens SBW25 0.70 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.75 PFLU_RS21805 flagellar export chaperone FliS low > 109
Pseudomonas stutzeri RCH2 0.66 Psest_3314 ribosomal subunit interface protein 0.47 Psest_2504 flagellar biosynthetic protein FliS low > 67
Shewanella loihica PV-4 0.63 Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) 0.42 Shew_1361 fliS flagellar protein FliS (RefSeq) low > 60
Marinobacter adhaerens HP15 0.62 HP15_2443 sigma 54 modulation protein/ribosomal protein S30EA 0.41 HP15_2368 flagellar protein FliS low > 73
Alteromonas macleodii MIT1002 0.60 MIT1002_00826 Ribosome hibernation promoting factor 0.29 MIT1002_01057 Flagellar protein FliS low > 70
Shewanella amazonensis SB2B 0.60 Sama_3089 ribosomal subunit interface protein (RefSeq) 0.40 Sama_2302 fliS flagellar protein FliS (RefSeq) low > 62
Shewanella sp. ANA-3 0.59 Shewana3_0671 sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) 0.39 Shewana3_1337 fliS flagellar protein FliS (RefSeq) low > 73
Rahnella sp. WP5 0.58 EX31_RS12395 ribosome hibernation promoting factor 0.33 EX31_RS09465 flagellar export chaperone FliS low > 89
Shewanella oneidensis MR-1 0.58 SO3962 yfiA-3 ribosomal subunit interface protein (NCBI ptt file) 0.38 SO3233 fliS flagellar protein FliS (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.56 HER17_RS20065 ribosome hibernation promoting factor 0.32 HER17_RS08300 flagellar export chaperone FliS low > 75
Serratia liquefaciens MT49 0.55 IAI46_22475 ribosome hibernation promoting factor 0.34 IAI46_15800 flagellar export chaperone FliS low > 86
Erwinia tracheiphila SCR3 0.53 LU632_RS21285 hpf ribosome hibernation promoting factor 0.32 LU632_RS13845 fliS flagellar export chaperone FliS — —
Pantoea sp. MT58 0.53 IAI47_17190 ribosome hibernation promoting factor 0.30 IAI47_08135 flagellar export chaperone FliS low > 76
Escherichia coli ECRC98 0.53 JDDGAC_21560 Ribosome hibernation promoting factor 0.28 JDDGAC_00355 fliS flagellar export chaperone FliS — —
Escherichia coli Nissle 1917 0.53 ECOLIN_RS18430 ribosome hibernation promoting factor 0.28 ECOLIN_RS10990 flagellar export chaperone FliS — —
Escherichia coli ECRC101 0.53 OKFHMN_17935 Ribosome hibernation promoting factor 0.28 OKFHMN_25765 fliS flagellar export chaperone FliS — —
Escherichia coli ECRC62 0.53 BNILDI_01800 Ribosome hibernation promoting factor 0.28 BNILDI_15175 fliS flagellar export chaperone FliS — —
Escherichia coli ECOR27 0.53 NOLOHH_09735 Ribosome hibernation promoting factor 0.27 NOLOHH_16385 fliS flagellar export chaperone FliS — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00497 Ribosome hibernation promoting factor 0.28 OHPLBJKB_01804 Flagellar secretion chaperone FliS low > 73
Escherichia coli ECRC102 0.53 NIAGMN_15695 Ribosome hibernation promoting factor 0.28 NIAGMN_02285 fliS flagellar export chaperone FliS — —
Escherichia fergusonii Becca 0.53 EFB2_00620 Ribosome hibernation promoting factor 0.28 EFB2_02020 Flagellar secretion chaperone FliS low > 86
Escherichia coli BW25113 0.53 b3203 yhbH predicted ribosome-associated, sigma 54 modulation protein (NCBI) 0.28 b1925 fliS flagellar protein FliS (NCBI) low > 76
Escherichia coli ECRC101 0.53 MCAODC_08455 Ribosome hibernation promoting factor 0.28 MCAODC_19625 fliS flagellar export chaperone FliS — —
Escherichia coli ECOR38 0.53 HEPCGN_16810 Ribosome hibernation promoting factor 0.28 HEPCGN_04120 fliS flagellar export chaperone FliS low > 85
Escherichia coli ECRC99 0.53 KEDOAH_10215 Ribosome hibernation promoting factor 0.28 KEDOAH_02325 fliS flagellar export chaperone FliS — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_3257 ribosomal subunit interface protein 0.27 EX28DRAFT_0621 flagellar biosynthetic protein FliS low > 76
Dechlorosoma suillum PS 0.52 Dsui_0703 ribosomal subunit interface protein 0.34 Dsui_1780 flagellar biosynthetic protein FliS low > 51
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2947 Ribosome hibernation protein YhbH 0.34 GFF4027 Flagellar biosynthesis protein FliS low > 78
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12820 ribosome hibernation promoting factor 0.42 CSW01_10675 flagellar protein FliS low > 62
Enterobacter sp. TBS_079 0.51 MPMX20_04109 Ribosome hibernation promoting factor 0.31 MPMX20_02856 Flagellar secretion chaperone FliS low > 85
Dickeya dianthicola ME23 0.51 DZA65_RS01505 ribosome hibernation promoting factor 0.29 DZA65_RS13880 flagellar export chaperone FliS low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS01440 ribosome hibernation promoting factor 0.29 HGI48_RS13395 flagellar export chaperone FliS low > 71
Dickeya dadantii 3937 0.51 DDA3937_RS01525 ribosome hibernation promoting factor 0.30 DDA3937_RS13350 flagellar export chaperone FliS low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF2612 Ribosome hibernation protein YhbH 0.28 GFF1447 Flagellar biosynthesis protein FliS low > 90
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS02080 ribosome hibernation promoting factor 0.30 RR42_RS23640 flagellar biosynthesis protein FliS low > 128
Variovorax sp. SCN45 0.45 GFF7293 Ribosome hibernation promoting factor Hpf 0.28 GFF5755 Flagellar biosynthesis protein FliS low > 127
Ralstonia solanacearum PSI07 0.44 RPSI07_RS22135 ribosomal subunit interface protein 0.32 RPSI07_RS01505 flagellar export chaperone FliS low > 81
Ralstonia solanacearum UW163 0.43 UW163_RS02415 ribosomal subunit interface protein 0.33 UW163_RS17570 flagellar export chaperone FliS — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS11165 ribosomal subunit interface protein 0.33 RALBFv3_RS21620 flagellar export chaperone FliS low > 76
Castellaniella sp019104865 MT123 0.43 ABCV34_RS14345 ribosome-associated translation inhibitor RaiA 0.25 ABCV34_RS05620 flagellar export chaperone FliS low > 48
Ralstonia solanacearum GMI1000 0.43 RS_RS02015 ribosomal subunit interface protein 0.31 RS_RS19005 flagellar export chaperone FliS low > 80
Lysobacter sp. OAE881 0.41 ABIE51_RS15960 ribosome-associated translation inhibitor RaiA 0.26 ABIE51_RS16735 flagellar export chaperone FliS low > 62
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS02900 ribosome hibernation promoting factor 0.30 BPHYT_RS18765 flagellar biosynthesis protein FliS low > 109
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS07055 ribosome-associated translation inhibitor RaiA 0.30 ABZR87_RS22165 flagellar export chaperone FliS low > 80
Paraburkholderia graminis OAS925 0.41 ABIE53_000717 putative sigma-54 modulation protein 0.31 ABIE53_000072 flagellar protein FliS 0.48 14
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_01928 sigma 54 modulation protein /SSU ribosomal protein S30P 0.29 H281DRAFT_05788 flagellar protein FliS low > 103
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS01750 ribosome-associated translation inhibitor RaiA 0.32 QEN71_RS28785 flagellar export chaperone FliS low > 153
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_02260 raiA ribosomal subunit interface protein 0.44 OKGIIK_02720 fliS flagellar export chaperone FliS low > 52
Rhodanobacter denitrificans MT42 0.39 LRK55_RS12570 ribosome-associated translation inhibitor RaiA 0.43 LRK55_RS13210 flagellar export chaperone FliS low > 63
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS12870 ribosome-associated translation inhibitor RaiA 0.44 LRK54_RS13470 flagellar export chaperone FliS low > 59
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS19810 ribosome-associated translation inhibitor RaiA 0.39 ABZR86_RS20140 flagellar export chaperone FliS low > 74
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1661.1 Ribosome hibernation protein YhbH 0.34 Xcc-8004.2793.1 Flagellar biosynthesis protein FliS low > 74

Not shown: 12 genomes with orthologs for PP_0951 only; 1 genomes with orthologs for PP_4375 only