Conservation of cofitness between PP_2215 and PP_2334 in Pseudomonas putida KT2440

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2215 acetyl-CoA acetyltransferase 1.0 PP_2334 2-methylisocitrate lyase 0.28 12
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_25685 acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) (from data) 0.92 AO353_00900 2-methylisocitrate lyase low > 101
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_2982 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) 0.92 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) 0.47 2
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS14765 acetyl-CoA C-acyltransferase 0.91 PFLU_RS22690 methylisocitrate lyase 0.47 11
Pseudomonas fluorescens SBW25 0.84 PFLU_RS14765 acetyl-CoA C-acyltransferase 0.91 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_4786 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.92 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) — —
Pseudomonas sp. RS175 0.84 PFR28_01882 Acetyl-CoA acetyltransferase 0.92 PFR28_02928 2-methylisocitrate lyase 0.60 13
Pseudomonas simiae WCS417 0.84 PS417_13855 acetyl-CoA acetyltransferase 0.91 PS417_21080 2-methylisocitrate lyase — —
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_1145 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.91 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) — —
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_26350 acetyl-CoA acetyltransferase 0.92 AO356_20865 2-methylisocitrate lyase 0.40 9
Pseudomonas stutzeri RCH2 0.76 Psest_2446 acetyl-CoA acetyltransferases 0.94 Psest_2321 methylisocitrate lyase 0.17 21
Rhodopseudomonas palustris CGA009 0.75 TX73_011915 acetyl-CoA C-acetyltransferase 0.36 TX73_012370 methylisocitrate lyase low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3031 Thiolase 0.88 Psyr_2085 methylisocitrate lyase 0.44 14
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3031 Thiolase 0.88 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas sp. S08-1 0.74 OH686_00870 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase 0.74 OH686_01690 methylisocitrate lyase low > 80
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS01125 acetyl-CoA C-acetyltransferase 0.79 QEN71_RS17555 methylisocitrate lyase low > 153
Paraburkholderia graminis OAS925 0.67 ABIE53_000590 acetyl-CoA C-acetyltransferase 0.32 ABIE53_005902 2-methylisocitrate lyase-like PEP mutase family enzyme low > 113
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_02089 acetyl-CoA C-acetyltransferase 0.31 H281DRAFT_02892 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 103
Azospirillum sp. SherDot2 0.66 MPMX19_03936 Acetyl-CoA acetyltransferase 0.32 MPMX19_04657 2,3-dimethylmalate lyase low > 112
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS02230 acetyl-CoA acetyltransferase 0.32 BPHYT_RS26855 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 109
Ralstonia solanacearum PSI07 0.65 RPSI07_RS22800 acetyl-CoA C-acyltransferase 0.82 RPSI07_RS14645 methylisocitrate lyase low > 81
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS06305 acetyl-CoA C-acetyltransferase 0.82 ABZR87_RS14590 methylisocitrate lyase low > 80
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS25380 acetyl-CoA acetyltransferase 0.82 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 128
Ralstonia solanacearum UW163 0.64 UW163_RS03065 acetyl-CoA C-acyltransferase 0.82 UW163_RS11055 methylisocitrate lyase — —
Ralstonia solanacearum GMI1000 0.64 RS_RS01355 acetyl-CoA C-acyltransferase 0.82 RS_RS10050 methylisocitrate lyase low > 80
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS10515 acetyl-CoA C-acyltransferase 0.82 RALBFv3_RS02670 methylisocitrate lyase low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF1723 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.33 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) — —
Acidovorax sp. GW101-3H11 0.63 Ac3H11_2994 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) 0.32 Ac3H11_2326 Methylisocitrate lyase (EC 4.1.3.30) low > 79
Rhodospirillum rubrum S1H 0.62 Rru_A1946 Acetyl-CoA C-acetyltransferase (NCBI) 0.39 Rru_A2320 Ankyrin (NCBI) low > 58
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_2511 acetyl-CoA acetyltransferases 0.66 B158DRAFT_1343 methylisocitrate lyase low > 40
Variovorax sp. OAS795 0.60 ABID97_RS25195 acetyl-CoA C-acyltransferase 0.33 ABID97_RS19370 isocitrate lyase/PEP mutase family protein low > 91
Variovorax sp. SCN45 0.60 GFF1993 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.33 GFF268 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) low > 127
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS04635 acetyl-CoA acetyltransferase 0.84 HSERO_RS15660 2-methylisocitrate lyase — —
Azospirillum brasilense Sp245 0.59 AZOBR_RS28180 acetyl-CoA acetyltransferase 0.29 AZOBR_RS24315 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 97
Shewanella loihica PV-4 0.59 Shew_1667 acetyl-CoA acetyltransferase (RefSeq) 0.66 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) 0.58 4
Castellaniella sp019104865 MT123 0.59 ABCV34_RS12360 acetyl-CoA C-acyltransferase 0.74 ABCV34_RS01670 methylisocitrate lyase low > 48
Shewanella amazonensis SB2B 0.59 Sama_1375 Acetyl-CoA C-acetyltransferase (RefSeq) 0.62 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) low > 62
Marinobacter adhaerens HP15 0.58 HP15_1009 acyl-CoA thiolase 0.67 HP15_1932 methylisocitrate lyase 2 — —
Acinetobacter radioresistens SK82 0.58 MPMX26_02383 Acetyl-CoA acetyltransferase 0.63 MPMX26_01289 2-methylisocitrate lyase — —
Alteromonas macleodii MIT1002 0.58 MIT1002_01671 Acetyl-CoA acetyltransferase 0.64 MIT1002_03129 Methylisocitrate lyase 0.48 23
Shewanella sp. ANA-3 0.57 Shewana3_2771 acetyl-CoA acetyltransferases (RefSeq) 0.61 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) 0.63 15
Shewanella oneidensis MR-1 0.57 SO1677 atoB 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) (from data) 0.62 SO0345 prpB methylisocitrate lyase (NCBI ptt file) 0.52 13
Dinoroseobacter shibae DFL-12 0.57 Dshi_0074 acetyl-CoA acetyltransferase (RefSeq) 0.30 Dshi_0689 isocitrate lyase family protein (RefSeq) low > 64
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_04025 paaJ acetyl-CoA C-acyltransferase 0.66 OKGIIK_06565 prpB methylisocitrate lyase low > 52
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS15265 acetyl-CoA C-acyltransferase 0.66 LRK54_RS00695 methylisocitrate lyase low > 59
Rhodanobacter denitrificans MT42 0.53 LRK55_RS14980 acetyl-CoA C-acyltransferase 0.66 LRK55_RS00470 methylisocitrate lyase low > 63
Lysobacter sp. OAE881 0.52 ABIE51_RS13145 acetyl-CoA C-acyltransferase 0.64 ABIE51_RS06015 methylisocitrate lyase low > 62
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS20570 acetyl-CoA C-acyltransferase 0.73 ABZR86_RS08480 methylisocitrate lyase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.3647.1 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.71 Xcc-8004.3981.1 Methylisocitrate lyase (EC 4.1.3.30) low > 74

Not shown: 14 genomes with orthologs for PP_2215 only; 18 genomes with orthologs for PP_2334 only