Conservation of cofitness between PP_0366 and PP_1079 in Pseudomonas putida KT2440

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0366 dethiobiotin synthetase 1.0 PP_1079 Ornithine carbamoyltransferase 0.45 12
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) 0.86 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.76 22
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) 0.86 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.43 66
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_14155 dethiobiotin synthetase 0.86 AO356_18275 ornithine carbamoyltransferase 0.34 63
Pseudomonas fluorescens SBW25 0.77 PFLU_RS27630 dethiobiotin synthase 0.84 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) 0.85 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.57 12
Pseudomonas sp. RS175 0.77 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 0.86 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic — —
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS27630 dethiobiotin synthase 0.84 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_07505 dethiobiotin synthetase 0.86 AO353_04155 ornithine carbamoyltransferase 0.56 50
Pseudomonas simiae WCS417 0.76 PS417_25985 dethiobiotin synthetase 0.86 PS417_05595 ornithine carbamoyltransferase 0.24 27
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_4683 dethiobiotin synthase 0.82 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_4683 dethiobiotin synthase 0.82 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas sp. S08-1 0.72 OH686_10335 dethiobiotin synthase 0.79 OH686_20405 ornithine carbamoyltransferase low > 80
Pseudomonas stutzeri RCH2 0.62 Psest_0415 dethiobiotin synthase 0.82 Psest_1291 ornithine carbamoyltransferase — —
Shewanella loihica PV-4 0.53 Shew_1722 dethiobiotin synthase (RefSeq) 0.31 Shew_0204 ornithine carbamoyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.51 SO2737 bioD dethiobiotin synthase (NCBI ptt file) 0.31 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.49 HP15_2482 dethiobiotin synthetase 0.66 HP15_750 ornithine carbamoyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS12700 dethiobiotin synthase 0.19 ABZR86_RS08730 N-acetylornithine carbamoyltransferase 0.37 20
Dechlorosoma suillum PS 0.43 Dsui_2884 dethiobiotin synthase 0.52 Dsui_3249 ornithine carbamoyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3994 Dethiobiotin synthetase (EC 6.3.3.3) 0.50 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_16455 bioD dethiobiotin synthase 0.19 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase low > 52
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS07180 dethiobiotin synthase 0.20 LRK54_RS02415 N-acetylornithine carbamoyltransferase low > 59
Rhodanobacter denitrificans MT42 0.41 LRK55_RS06915 dethiobiotin synthase 0.20 LRK55_RS02170 N-acetylornithine carbamoyltransferase low > 63
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0869 dethiobiotin synthase 0.20 B158DRAFT_1975 Ornithine carbamoyltransferase — —
Variovorax sp. OAS795 0.37 ABID97_RS16255 dethiobiotin synthase 0.55 ABID97_RS08630 ornithine carbamoyltransferase — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS12255 dethiobiotin synthetase 0.51 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) — —
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS02155 dithiobiotin synthetase 0.51 BPHYT_RS15915 ornithine carbamoyltransferase low > 109
Variovorax sp. SCN45 0.36 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) 0.53 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS00825 dethiobiotin synthase 0.50 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Ralstonia solanacearum UW163 0.35 UW163_RS14160 dethiobiotin synthase 0.50 UW163_RS08440 ornithine carbamoyltransferase — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3829 Dethiobiotin synthetase (EC 6.3.3.3) 0.51 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_02096 dethiobiotin synthetase 0.52 H281DRAFT_04119 ornithine carbamoyltransferase low > 103
Paraburkholderia graminis OAS925 0.34 ABIE53_000578 dethiobiotin synthetase 0.52 ABIE53_003354 ornithine carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS16695 dethiobiotin synthase 0.50 RPSI07_RS12115 ornithine carbamoyltransferase — —
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS12345 dethiobiotin synthase 0.51 ABZR87_RS00840 ornithine carbamoyltransferase — —
Ralstonia solanacearum GMI1000 0.32 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD 0.50 RS_RS12805 ornithine carbamoyltransferase — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS01090 dethiobiotin synthase 0.51 QEN71_RS02785 ornithine carbamoyltransferase — —
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS00935 dethiobiotin synthetase 0.50 RR42_RS17175 ornithine carbamoyltransferase — —
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS15275 dethiobiotin synthase 0.15 HMPREF1078_RS10660 acetylornithine carbamoyltransferase 0.78 51
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_1009 dethiobiotin synthase (RefSeq) 0.45 DvMF_0046 ornithine carbamoyltransferase (RefSeq) low > 51
Rhizobium sp. OAE497 0.15 ABIE40_RS21065 dethiobiotin synthase 0.46 ABIE40_RS02325 ornithine carbamoyltransferase low > 107
Synechococcus elongatus PCC 7942 0.15 Synpcc7942_0030 bioD dethiobiotin synthase 0.44 Synpcc7942_2514 argF ornithine carbamoyltransferase — —
Castellaniella sp019104865 MT123 0.14 ABCV34_RS15285 dethiobiotin synthase 0.51 ABCV34_RS05380 ornithine carbamoyltransferase low > 48
Pedobacter sp. GW460-11-11-14-LB5 0.14 CA265_RS09760 dethiobiotin synthase 0.13 CA265_RS18520 acetylornithine carbamoyltransferase low > 88
Agrobacterium fabrum C58 0.14 Atu3999 dithiobiotin synthetase 0.47 Atu0429 ornithine carbamoyltransferase — —
Methanococcus maripaludis S2 0.13 MMP_RS08095 dethiobiotin synthase 0.33 MMP_RS02925 ornithine carbamoyltransferase — —
Phaeobacter inhibens DSM 17395 0.13 PGA1_c09140 dethiobiotin synthetase BioD 0.44 PGA1_c24220 ornithine carbamoyltransferase ArgF low > 62
Methanococcus maripaludis JJ 0.13 MMJJ_RS06270 dethiobiotin synthase 0.33 MMJJ_RS02150 ornithine carbamoyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_02415 dethiobiotin synthase 0.16 CA264_06240 acetylornithine carbamoyltransferase low > 74

Not shown: 34 genomes with orthologs for PP_0366 only; 18 genomes with orthologs for PP_1079 only