Conservation of cofitness between PFLU_RS03610 and PFLU_RS04440 in Pseudomonas fluorescens SBW25

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS03610 redox-regulated ATPase YchF 1.0 PFLU_RS04440 outer membrane lipid asymmetry maintenance protein MlaD 0.84 4
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS03610 redox-regulated ATPase YchF 1.00 PFLU_RS04440 outer membrane lipid asymmetry maintenance protein MlaD low > 109
Pseudomonas simiae WCS417 0.97 PS417_03560 GTP-binding protein 0.88 PS417_04385 organic solvent ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_16450 GTP-binding protein 0.77 AO356_06995 outer membrane lipid asymmetry maintenance protein MlaD low > 104
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF 0.82 PfGW456L13_5006 Uncharacterized ABC transporter, periplasmic component YrbD low > 87
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_14740 GTP-binding protein 0.84 AO353_05140 outer membrane lipid asymmetry maintenance protein MlaD low > 101
Pseudomonas syringae pv. syringae B728a 0.96 Psyr_0941 Conserved hypothetical protein 92 0.79 Psyr_4139 Mce4/Rv3499c/MTV023.06c protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.96 Psyr_0941 Conserved hypothetical protein 92 0.79 Psyr_4139 Mce4/Rv3499c/MTV023.06c protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF 0.82 Pf1N1B4_1072 Uncharacterized ABC transporter, periplasmic component YrbD
Pseudomonas sp. RS175 0.94 PFR28_03664 Ribosome-binding ATPase YchF 0.81 PFR28_00181 Intermembrane phospholipid transport system binding protein MlaD low > 88
Pseudomonas putida KT2440 0.92 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.82 PP_0960 phospholipid ABC transporter binding protein 0.29 43
Pseudomonas sp. S08-1 0.90 OH686_07965 GTP-binding and nucleic acid-binding protein YchF 0.78 OH686_08500 outer membrane lipid asymmetry maintenance protein MlaD low > 80
Pseudomonas stutzeri RCH2 0.89 Psest_1103 GTP-binding protein YchF 0.66 Psest_3305 ABC-type transport system involved in resistance to organic solvents, periplasmic component low > 67
Marinobacter adhaerens HP15 0.75 HP15_704 translation-associated GTPase 0.51 HP15_2434 mammalian cell entry related domain protein low > 73
Acinetobacter radioresistens SK82 0.75 MPMX26_01861 Ribosome-binding ATPase YchF 0.34 MPMX26_02739 Intermembrane phospholipid transport system binding protein MlaD low > 36
Shewanella amazonensis SB2B 0.71 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.41 Sama_3079 mce-related protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.71 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.38 Shewana3_0680 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.71 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) 0.38 SO3952 mce-related protein (NCBI ptt file) low > 76
Escherichia coli ECRC62 0.70 BNILDI_18805 ychF redox-regulated ATPase YchF 0.44 BNILDI_01750 mlaD outer membrane lipid asymmetry maintenance protein MlaD low > 75
Escherichia coli ECOR38 0.70 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.44 HEPCGN_16860 mlaD outer membrane lipid asymmetry maintenance protein MlaD low > 87
Escherichia coli ECRC100 0.70 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.44 OKFHMN_17985 mlaD outer membrane lipid asymmetry maintenance protein MlaD
Escherichia coli ECRC101 0.70 MCAODC_21850 ychF redox-regulated ATPase YchF 0.44 MCAODC_08505 mlaD outer membrane lipid asymmetry maintenance protein MlaD low > 87
Escherichia coli ECOR27 0.70 NOLOHH_20650 ychF redox-regulated ATPase YchF 0.44 NOLOHH_09785 mlaD outer membrane lipid asymmetry maintenance protein MlaD
Escherichia coli BW25113 0.70 b1203 ychF translation-associated GTPase (NCBI) 0.44 b3193 yrbD predicted ABC-type organic solvent transporter (NCBI)
Escherichia coli ECRC99 0.70 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.44 KEDOAH_10165 mlaD outer membrane lipid asymmetry maintenance protein MlaD
Escherichia fergusonii Becca 0.70 EFB2_02724 Ribosome-binding ATPase YchF 0.44 EFB2_00630 Intermembrane phospholipid transport system binding protein MlaD low > 86
Escherichia coli Nissle 1917 0.70 ECOLIN_RS07280 redox-regulated ATPase YchF 0.44 ECOLIN_RS18380 outer membrane lipid asymmetry maintenance protein MlaD low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_02484 Ribosome-binding ATPase YchF 0.44 OHPLBJKB_00507 putative phospholipid ABC transporter-binding protein MlaD low > 73
Escherichia coli ECRC98 0.70 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.44 JDDGAC_21610 mlaD outer membrane lipid asymmetry maintenance protein MlaD low > 86
Escherichia coli ECRC102 0.70 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.44 NIAGMN_15745 mlaD outer membrane lipid asymmetry maintenance protein MlaD
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.43 GFF2937 Uncharacterized ABC transporter, periplasmic component YrbD low > 78
Erwinia tracheiphila SCR3 0.70 LU632_RS13950 ychF redox-regulated ATPase YchF 0.39 LU632_RS21235 mlaD outer membrane lipid asymmetry maintenance protein MlaD low > 74
Escherichia coli BL21 0.70 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated 0.44 ECD_03058 OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein
Pantoea sp. MT58 0.69 IAI47_11310 redox-regulated ATPase YchF 0.42 IAI47_17135 outer membrane lipid asymmetry maintenance protein MlaD low > 76
Pectobacterium carotovorum WPP14 0.69 HER17_RS10445 redox-regulated ATPase YchF 0.45 HER17_RS20015 outer membrane lipid asymmetry maintenance protein MlaD low > 75
Klebsiella michiganensis M5al 0.68 BWI76_RS17485 GTP-binding protein YchF 0.42 BWI76_RS25220 outer membrane lipid asymmetry maintenance protein MlaD
Enterobacter sp. TBS_079 0.68 MPMX20_02645 Ribosome-binding ATPase YchF 0.45 MPMX20_04099 Intermembrane phospholipid transport system binding protein MlaD low > 85
Alteromonas macleodii MIT1002 0.68 MIT1002_01504 Ribosome-binding ATPase YchF 0.39 MIT1002_00836 putative phospholipid ABC transporter-binding protein MlaD low > 70
Rahnella sp. WP5 0.68 EX31_RS07380 redox-regulated ATPase YchF 0.41 EX31_RS12445 outer membrane lipid asymmetry maintenance protein MlaD low > 89
Shewanella loihica PV-4 0.68 Shew_2919 translation-associated GTPase (RefSeq) 0.39 Shew_3302 hypothetical protein (RefSeq) low > 60
Enterobacter asburiae PDN3 0.67 EX28DRAFT_0821 GTP-binding protein YchF 0.44 EX28DRAFT_3247 mce related protein
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_10875 redox-regulated ATPase YchF 0.35 CSW01_12765 outer membrane lipid asymmetry maintenance protein MlaD low > 62
Serratia liquefaciens MT49 0.67 IAI46_10240 redox-regulated ATPase YchF 0.46 IAI46_22420 outer membrane lipid asymmetry maintenance protein MlaD
Castellaniella sp019104865 MT123 0.66 ABCV34_RS09215 redox-regulated ATPase YchF 0.48 ABCV34_RS11190 outer membrane lipid asymmetry maintenance protein MlaD
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05705 hypothetical protein 0.44 H281DRAFT_05643 phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF630 GTP-binding and nucleic acid-binding protein YchF 0.38 GFF1323 Uncharacterized ABC transporter, periplasmic component YrbD low > 90
Ralstonia solanacearum GMI1000 0.65 RS_RS14520 redox-regulated ATPase YchF 0.45 RS_RS14835 outer membrane lipid asymmetry maintenance protein MlaD low > 80
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS02220 redox-regulated ATPase YchF 0.45 ABZR87_RS02545 outer membrane lipid asymmetry maintenance protein MlaD 0.68 15
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS18365 GTP-binding protein 0.47 RR42_RS18960 ABC transporter substrate-binding protein low > 128
Acidovorax sp. GW101-3H11 0.64 Ac3H11_4001 GTP-binding and nucleic acid-binding protein YchF 0.38 Ac3H11_4714 Uncharacterized ABC transporter, periplasmic component YrbD
Ralstonia solanacearum PSI07 0.64 RPSI07_RS10660 redox-regulated ATPase YchF 0.45 RPSI07_RS10345 outer membrane lipid asymmetry maintenance protein MlaD low > 81
Variovorax sp. SCN45 0.64 GFF2141 GTP-binding and nucleic acid-binding protein YchF 0.34 GFF5336 Phospholipid ABC transporter substrate-binding protein MlaD low > 127
Ralstonia solanacearum UW163 0.63 UW163_RS07055 redox-regulated ATPase YchF 0.45 UW163_RS06725 outer membrane lipid asymmetry maintenance protein MlaD
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS06570 redox-regulated ATPase YchF 0.45 RALBFv3_RS06890 outer membrane lipid asymmetry maintenance protein MlaD low > 76
Variovorax sp. OAS795 0.63 ABID97_RS24750 redox-regulated ATPase YchF 0.41 ABID97_RS23205 outer membrane lipid asymmetry maintenance protein MlaD low > 91
Dechlorosoma suillum PS 0.62 Dsui_1039 GTP-binding protein YchF 0.46 Dsui_1400 ABC-type transport system involved in resistance to organic solvents, periplasmic component
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS20405 GTP-binding protein YchF 0.43 HSERO_RS20390 ABC transporter substrate-binding protein
Dinoroseobacter shibae DFL-12 0.57 Dshi_0954 GTP-binding protein YchF (RefSeq) 0.24 Dshi_1391 Mammalian cell entry related domain protein (RefSeq)
Phaeobacter inhibens DSM 17395 0.56 PGA1_c04950 GTP-dependent nucleic acid-binding protein EngD 0.24 PGA1_c12570 ABC-type transport system involved in resistance to organic solvents, periplasmic component low > 62
Caulobacter crescentus NA1000 Δfur 0.55 CCNA_00512 GTP-binding protein, probable translation factor 0.21 CCNA_03808 organic solvent resistance transport system Ttg2C protein low > 67
Caulobacter crescentus NA1000 0.55 CCNA_00512 GTP-binding protein, probable translation factor 0.21 CCNA_03808 organic solvent resistance transport system Ttg2C protein low > 66
Desulfovibrio vulgaris Hildenborough JW710 0.52 DVU1429 GTP-binding protein (TIGR) 0.28 DVU1244 conserved hypothetical protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_0234 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.28 DvMF_0854 Mammalian cell entry related domain protein (RefSeq) low > 51

Not shown: 40 genomes with orthologs for PFLU_RS03610 only; 1 genomes with orthologs for PFLU_RS04440 only