Conservation of cofitness between NOLOHH_06505 and NOLOHH_21290 in Escherichia coli ECOR27

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06505 rarD EamA family transporter RarD 1.0 NOLOHH_21290 yceI YceI family protein 0.59 19
Escherichia coli ECRC62 1.00 BNILDI_05025 rarD EamA family transporter RarD 1.00 BNILDI_19450 yceI YceI family protein low > 75
Escherichia coli ECRC99 1.00 KEDOAH_13775 rarD EamA family transporter RarD 1.00 KEDOAH_23995 yceI YceI family protein — —
Escherichia coli ECRC100 1.00 OKFHMN_14375 rarD EamA family transporter RarD 1.00 OKFHMN_03760 yceI YceI family protein — —
Escherichia coli ECRC102 1.00 NIAGMN_12130 rarD EamA family transporter RarD 1.00 NIAGMN_24070 yceI YceI family protein — —
Escherichia coli ECRC98 1.00 JDDGAC_18000 rarD EamA family transporter RarD 1.00 JDDGAC_07420 yceI YceI family protein low > 86
Escherichia coli BW25113 0.99 b3819 rarD predicted chloramphenical resistance permease (NCBI) 1.00 b1056 yceI hypothetical protein (NCBI) low > 76
Escherichia coli ECRC101 0.99 MCAODC_04880 rarD EamA family transporter RarD 1.00 MCAODC_23120 yceI YceI family protein low > 87
Escherichia coli ECOR38 0.99 HEPCGN_13075 rarD EamA family transporter RarD 0.99 HEPCGN_23730 yceI YceI family protein low > 87
Escherichia fergusonii Becca 0.99 EFB2_04818 Protein RarD 1.00 EFB2_02918 Protein YceI low > 86
Escherichia coli BL21 0.99 ECD_03698 putative chloramphenical resistance permease 1.00 ECD_01052 periplasmic high pH-inducible lipid-binding protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04232 Protein RarD 0.99 OHPLBJKB_02609 Protein YceI low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS21920 EamA family transporter RarD 0.99 ECOLIN_RS06130 YceI family protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF245 Protein rarD 0.93 GFF3335 Protein yceI precursor — —
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4484 rarD protein 0.90 EX28DRAFT_1875 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04461 Protein RarD 0.89 MPMX20_01736 Protein YceI low > 85
Serratia liquefaciens MT49 0.80 IAI46_00755 EamA family transporter RarD 0.75 IAI46_09690 YceI family protein low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS01380 EamA family transporter RarD 0.79 HER17_RS08575 YceI family protein low > 75
Erwinia tracheiphila SCR3 0.74 LU632_RS24110 rarD EamA family transporter RarD 0.76 LU632_RS10305 YceI family protein low > 74
Pantoea sp. MT58 0.73 IAI47_18375 EamA family transporter RarD 0.82 IAI47_12245 YceI family protein low > 76
Rahnella sp. WP5 0.71 EX31_RS15195 EamA family transporter RarD 0.74 EX31_RS24340 YceI family protein low > 89
Dickeya dadantii 3937 0.67 DDA3937_RS19865 EamA family transporter RarD 0.84 DDA3937_RS13190 YceI family protein 0.37 70
Dickeya dianthicola ME23 0.65 DZA65_RS21060 EamA family transporter RarD 0.83 DZA65_RS13730 YceI family protein low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS20020 EamA family transporter RarD 0.82 HGI48_RS13255 YceI family protein low > 71
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_01040 protein RarD 0.51 CSW01_16930 YceI family protein low > 62
Shewanella oneidensis MR-1 0.59 SO4243 rarD rarD protein (NCBI ptt file) 0.51 SO3370 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.58 Shewana3_1179 hypothetical protein (RefSeq) — —
Shewanella loihica PV-4 0.57 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.55 Shew_1121 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.55 Sama_0332 rarD protein (RefSeq) 0.56 Sama_0950 hypothetical protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_00151 putative chloramphenical resistance permease RarD 0.55 MIT1002_03884 hypothetical protein low > 70
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4754 Protein rarD 0.57 Pf6N2E2_4634 Protein yceI precursor low > 103
Pseudomonas sp. RS175 0.48 PFR28_04108 Protein RarD 0.55 PFR28_04205 Protein YceI low > 88
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2480 Protein rarD 0.55 Pf1N1B4_2381 Protein yceI precursor low > 87
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1142 Protein rarD 0.54 PfGW456L13_1047 Protein yceI precursor low > 87
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14110 Putative D-serine transporter (from data) 0.59 AO356_13585 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_07550 chloramphenical resistance permease RarD 0.60 AO353_08035 hypothetical protein low > 101
Pseudomonas simiae WCS417 0.46 PS417_26030 chloramphenical resistance permease RarD 0.58 PS417_26530 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.46 PFLU_RS27675 EamA family transporter RarD 0.57 PFLU_RS28185 YceI family protein low > 109
Pseudomonas putida KT2440 0.46 PP_0358 conserved membrane protein of unknown function 0.56 PP_4981 polyisoprene-binding protein, acidic stress response factor low > 96
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS27675 EamA family transporter RarD 0.57 PFLU_RS28185 YceI family protein low > 109
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS26035 EamA family transporter RarD 0.23 QEN71_RS16655 YceI family protein low > 153
Pseudomonas stutzeri RCH2 0.41 Psest_0356 rarD protein 0.68 Psest_0308 Uncharacterized conserved protein — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4698 RarD protein 0.56 Psyr_0457 YceI low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4698 RarD protein 0.56 Psyr_0457 YceI low > 86
Marinobacter adhaerens HP15 0.39 HP15_2670 RarD protein, DMT superfamily transporter 0.57 HP15_2523 hypothetical protein low > 73
Pseudomonas sp. S08-1 0.38 OH686_10385 Uncharacterized inner membrane protein RarD 0.69 OH686_10840 Protein yceI precursor low > 80
Lysobacter sp. OAE881 0.38 ABIE51_RS03205 EamA family transporter RarD 0.26 ABIE51_RS17655 YceI family protein low > 62
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0490 rarD protein 0.29 B158DRAFT_0439 Uncharacterized conserved protein low > 40
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS08060 EamA family transporter RarD 0.22 ABZR87_RS01300 YceI family protein low > 80
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_3478 rarD protein 0.28 Ga0059261_4033 Uncharacterized conserved protein low > 68
Azospirillum brasilense Sp245 0.36 AZOBR_RS04315 transporter 0.31 AZOBR_RS24000 polyprenyl-pyrophosphate binding protein 0.21 95
Ralstonia solanacearum GMI1000 0.36 RS_RS02855 EamA family transporter RarD 0.26 RS_RS23115 polyisoprenoid-binding protein low > 80
Phaeobacter inhibens DSM 17395 0.35 PGA1_c33100 protein RarD 0.28 PGA1_c18050 Uncharacterized conserved protein low > 62
Ralstonia solanacearum UW163 0.35 UW163_RS01440 EamA family transporter RarD 0.20 UW163_RS07920 polyisoprenoid-binding protein — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS12170 EamA family transporter RarD 0.20 RALBFv3_RS05705 polyisoprenoid-binding protein low > 76
Acidovorax sp. GW101-3H11 0.35 Ac3H11_4000 RarD protein, DMT superfamily transporter 0.21 Ac3H11_3546 Protein yceI precursor low > 79
Ralstonia solanacearum PSI07 0.33 RPSI07_RS21160 EamA family transporter RarD 0.26 RPSI07_RS05700 polyisoprenoid-binding protein low > 81
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS23555 membrane protein 0.21 HSERO_RS03410 polyisoprenoid-binding protein low > 78
Azospirillum sp. SherDot2 0.31 MPMX19_00476 Protein RarD 0.32 MPMX19_03035 Protein YceI low > 112
Caulobacter crescentus NA1000 0.31 CCNA_00254 RarD family membrane permease 0.27 CCNA_02203 YceI-like domain protein low > 66
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00254 RarD family membrane permease 0.27 CCNA_02203 YceI-like domain protein low > 67
Rhodospirillum rubrum S1H 0.31 Rru_A0706 RarD protein (NCBI) 0.32 Rru_A3681 YceI (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS12695 EamA family transporter RarD 0.30 A4249_RS15520 YceI family protein low > 48
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS34860 chemotaxis protein 0.22 BPHYT_RS03435 polyisoprenoid-binding protein low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1172 Chloramphenicol-sensitive protein rarD 0.25 GFF4466 YceI family protein low > 90
Acinetobacter radioresistens SK82 0.18 MPMX26_02140 Protein RarD 0.28 MPMX26_01773 Protein YceI low > 36
Castellaniella sp019104865 MT123 0.17 ABCV34_RS08310 EamA family transporter RarD 0.26 ABCV34_RS08175 YceI family protein low > 48
Pedobacter sp. GW460-11-11-14-LB5 0.11 CA265_RS22830 permease 0.30 CA265_RS21410 hypothetical protein low > 88

Not shown: 12 genomes with orthologs for NOLOHH_06505 only; 8 genomes with orthologs for NOLOHH_21290 only