Conservation of cofitness between HSERO_RS11215 and HSERO_RS21540 in Herbaspirillum seropedicae SmR1

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11215 methionine sulfoxide reductase B 1.0 HSERO_RS21540 alkyl hydroperoxide reductase subunit C 0.33 8
Castellaniella sp019104865 MT123 0.70 ABCV34_RS08520 peptide-methionine (R)-S-oxide reductase MsrB 0.90 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C low > 48
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS09545 peptide methionine sulfoxide reductase 0.82 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C — —
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS12635 peptide-methionine (R)-S-oxide reductase MsrB 0.73 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C low > 80
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_00913 peptide-methionine (R)-S-oxide reductase 0.83 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) low > 103
Paraburkholderia graminis OAS925 0.68 ABIE53_002148 peptide-methionine (R)-S-oxide reductase 0.83 ABIE53_005904 peroxiredoxin low > 113
Ralstonia solanacearum GMI1000 0.68 RS_RS08825 peptide-methionine (R)-S-oxide reductase 0.75 RS_RS18335 peroxiredoxin low > 80
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS01185 peptide-methionine (R)-S-oxide reductase 0.74 RALBFv3_RS22270 peroxiredoxin 0.40 28
Ralstonia solanacearum UW163 0.67 UW163_RS14495 peptide-methionine (R)-S-oxide reductase 0.74 UW163_RS22815 peroxiredoxin — —
Lysobacter sp. OAE881 0.66 ABIE51_RS05405 peptide-methionine (R)-S-oxide reductase MsrB 0.81 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C low > 62
Ralstonia solanacearum PSI07 0.66 RPSI07_RS16290 peptide-methionine (R)-S-oxide reductase 0.74 RPSI07_RS00930 peroxiredoxin low > 81
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS11165 methionine sulfoxide reductase B 0.27 RR42_RS07870 alkyl hydroperoxide reductase low > 128
Synechococcus elongatus PCC 7942 0.65 Synpcc7942_2190 msrB Methionine sulfoxide reductase B 0.43 Synpcc7942_2309 2-cys prx thioredoxin peroxidase low > 38
Acinetobacter radioresistens SK82 0.60 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB 0.83 MPMX26_02009 Alkyl hydroperoxide reductase C low > 36
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_19155 peptide methionine sulfoxide reductase 0.79 AO353_26965 alkyl hydroperoxide reductase low > 101
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2445 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.82 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_260 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.80 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) — —
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS11250 peptide-methionine (R)-S-oxide reductase MsrB 0.89 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C low > 74
Acidovorax sp. GW101-3H11 0.60 Ac3H11_2535 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.68 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) — —
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_03085 peptide methionine sulfoxide reductase 0.81 AO356_22805 alkyl hydroperoxide reductase low > 104
Pseudomonas putida KT2440 0.59 PP_1873 Peptide methionine sulfoxide reductase MsrB 0.83 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_3614 Protein of unknown function DUF25 0.82 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_3614 Protein of unknown function DUF25 0.82 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Variovorax sp. OAS795 0.59 ABID97_RS15695 peptide-methionine (R)-S-oxide reductase MsrB 0.70 ABID97_RS10800 alkyl hydroperoxide reductase subunit C low > 91
Variovorax sp. SCN45 0.59 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.70 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) low > 127
Pseudomonas stutzeri RCH2 0.58 Psest_1773 methionine-R-sulfoxide reductase 0.74 Psest_1133 peroxiredoxin — —
Pseudomonas sp. RS175 0.58 PFR28_00985 Peptide methionine sulfoxide reductase MsrB 0.81 PFR28_02482 Alkyl hydroperoxide reductase C low > 88
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.79 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 87
Pseudomonas simiae WCS417 0.57 PS417_08565 peptide methionine sulfoxide reductase 0.83 PS417_14045 alkyl hydroperoxide reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.83 PFLU_RS14570 peroxiredoxin low > 109
Pseudomonas fluorescens SBW25 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.83 PFLU_RS14570 peroxiredoxin low > 109
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_2180 methionine-R-sulfoxide reductase 0.74 Ga0059261_0155 peroxiredoxin low > 68
Pseudomonas sp. S08-1 0.56 OH686_22580 Peptide-methionine (R)-S-oxide reductase MsrB 0.73 OH686_18680 peroxiredoxin low > 80
Shewanella sp. ANA-3 0.54 Shewana3_4333 methionine-R-sulfoxide reductase (RefSeq) 0.78 Shewana3_3325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.54 MIT1002_02396 Peptide methionine sulfoxide reductase MsrB 0.72 MIT1002_01784 Alkyl hydroperoxide reductase subunit C low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF4579 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.72 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 90
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1772 methionine-R-sulfoxide reductase 0.73 EX28DRAFT_2350 peroxiredoxin low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB 0.73 OHPLBJKB_03100 Alkyl hydroperoxide reductase C low > 73
Enterobacter sp. TBS_079 0.52 MPMX20_01845 Peptide methionine sulfoxide reductase MsrB 0.73 MPMX20_01271 Alkyl hydroperoxide reductase C low > 85
Escherichia fergusonii Becca 0.52 EFB2_02216 Peptide methionine sulfoxide reductase MsrB 0.73 EFB2_03486 Alkyl hydroperoxide reductase C low > 86
Escherichia coli ECRC100 0.52 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB 0.73 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C low > 80
Escherichia coli ECOR27 0.52 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB 0.73 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C low > 75
Escherichia coli BL21 0.52 ECD_01747 methionine sulfoxide reductase B 0.73 ECD_00574 alkyl hydroperoxide reductase, C22 subunit low > 61
Escherichia coli ECRC99 0.52 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB 0.73 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB 0.73 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C — —
Escherichia coli ECRC101 0.52 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB 0.73 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C low > 87
Escherichia coli ECRC62 0.52 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB 0.73 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C low > 75
Escherichia coli ECRC102 0.52 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB 0.73 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli ECRC98 0.52 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB 0.73 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C low > 86
Escherichia coli ECOR38 0.52 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB 0.73 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C low > 87
Escherichia coli BW25113 0.52 b1778 yeaA methionine sulfoxide reductase B (NCBI) 0.73 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3479 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.72 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 78
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU0576 msrB peptide methionine sulfoxide reductase MsrB (TIGR) 0.34 DVU2247 ahpC alkyl hydroperoxide reductase C (Dmitry Rodionov) low > 55
Marinobacter adhaerens HP15 0.51 HP15_3127 methionine sulfoxide reductase B 0.69 HP15_3622 peroxiredoxin low > 73
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_09970 peptide-methionine (R)-S-oxide reductase 0.35 CSW01_03815 peroxidase 0.81 45
Klebsiella michiganensis M5al 0.49 BWI76_RS11515 peptide-methionine (R)-S-oxide reductase 0.73 BWI76_RS07940 alkyl hydroperoxide reductase subunit C low > 92
Serratia liquefaciens MT49 0.49 IAI46_14350 peptide-methionine (R)-S-oxide reductase MsrB 0.35 IAI46_04825 peroxiredoxin C low > 86
Pantoea sp. MT58 0.48 IAI47_08950 peptide-methionine (R)-S-oxide reductase MsrB 0.75 IAI47_06790 alkyl hydroperoxide reductase subunit C 0.70 5
Pectobacterium carotovorum WPP14 0.48 HER17_RS11125 peptide-methionine (R)-S-oxide reductase MsrB 0.74 HER17_RS02545 alkyl hydroperoxide reductase subunit C low > 75
Azospirillum brasilense Sp245 0.46 AZOBR_RS02680 methionine sulfoxide reductase B 0.81 AZOBR_RS20510 alkyl hydroperoxide reductase subunit C low > 97
Dickeya dianthicola 67-19 0.45 HGI48_RS10280 peptide-methionine (R)-S-oxide reductase MsrB 0.74 HGI48_RS02460 alkyl hydroperoxide reductase subunit C low > 71
Dickeya dianthicola ME23 0.45 DZA65_RS10755 peptide-methionine (R)-S-oxide reductase MsrB 0.74 DZA65_RS02565 alkyl hydroperoxide reductase subunit C low > 75
Dickeya dadantii 3937 0.44 DDA3937_RS10270 peptide-methionine (R)-S-oxide reductase MsrB 0.74 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C low > 74
Azospirillum sp. SherDot2 0.44 MPMX19_06019 Peptide methionine sulfoxide reductase MsrB 0.80 MPMX19_05835 Alkyl hydroperoxide reductase C low > 112
Caulobacter crescentus NA1000 0.41 CCNA_02265 peptide methionine sulfoxide reductase msrB 0.74 CCNA_03012 peroxiredoxin low > 66
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_02265 peptide methionine sulfoxide reductase msrB 0.74 CCNA_03012 peroxiredoxin — —

Not shown: 10 genomes with orthologs for HSERO_RS11215 only; 24 genomes with orthologs for HSERO_RS21540 only