Conservation of cofitness between HSERO_RS12590 and HSERO_RS16505 in Herbaspirillum seropedicae SmR1

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12590 ethanolamin permease 1.0 HSERO_RS16505 3-isopropylmalate dehydratase small subunit 0.50 2
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS00030 ethanolamine permease 0.82 QEN71_RS17615 3-isopropylmalate dehydratase small subunit low > 153
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_02303 ethanolamine:proton symporter, EAT family 0.82 H281DRAFT_06073 3-isopropylmalate dehydratase, small subunit low > 103
Paraburkholderia graminis OAS925 0.80 ABIE53_000359 ethanolamine permease 0.82 ABIE53_004803 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit low > 113
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS00100 ethanolamine permease 0.82 BPHYT_RS33905 3-isopropylmalate dehydratase small subunit low > 109
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS21315 ethanolamine permease 0.78 RR42_RS14390 3-isopropylmalate dehydratase low > 128
Rahnella sp. WP5 0.74 EX31_RS20130 ethanolamine permease 0.54 EX31_RS03695 3-isopropylmalate dehydratase small subunit low > 89
Azospirillum sp. SherDot2 0.73 MPMX19_05701 Putrescine transporter PotE 0.52 MPMX19_00606 3-isopropylmalate dehydratase small subunit 1 low > 112
Rhodospirillum rubrum S1H 0.72 Rru_A1030 Amino acid permease-associated region (NCBI) 0.53 Rru_A1190 3-isopropylmalate dehydratase small subunit region (NCBI) low > 58
Klebsiella michiganensis M5al 0.71 BWI76_RS06010 ethanolamine permease 0.53 BWI76_RS04665 3-isopropylmalate dehydratase small subunit low > 92
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4978 Ethanolamine permease 0.70 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 103
Pseudomonas sp. RS175 0.69 PFR28_03886 putative amino acid permease YhdG 0.71 PFR28_02823 3-isopropylmalate dehydratase small subunit 1 low > 88
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1341 Ethanolamine permease 0.71 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 87
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2672 Ethanolamine permease 0.70 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_15220 ethanolamine permease 0.70 AO356_21405 3-isopropylmalate dehydratase low > 104
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_06565 ethanolamine permease 0.71 AO353_20625 3-isopropylmalate dehydratase low > 101
Pseudomonas sp. S08-1 0.68 OH686_07700 ethanolamine permease 0.70 OH686_04475 3-isopropylmalate dehydratase small subunit low > 80
Pseudomonas fluorescens SBW25 0.68 PFLU_RS08215 ethanolamine permease 0.69 PFLU_RS20575 3-isopropylmalate dehydratase small subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS08215 ethanolamine permease 0.69 PFLU_RS20575 3-isopropylmalate dehydratase small subunit low > 109
Pseudomonas simiae WCS417 0.68 PS417_08275 ethanolamin permease 0.70 PS417_18595 3-isopropylmalate dehydratase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1835 ethanolamine:proton symporter, EAT family 0.71 Psyr_1984 3-isopropylmalate dehydratase, small subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1835 ethanolamine:proton symporter, EAT family 0.71 Psyr_1984 3-isopropylmalate dehydratase, small subunit low > 86
Variovorax sp. OAS795 0.68 ABID97_RS19505 ethanolamine permease 0.71 ABID97_RS08460 3-isopropylmalate dehydratase small subunit
Pantoea sp. MT58 0.67 IAI47_14900 ethanolamine permease 0.52 IAI47_16015 3-isopropylmalate dehydratase small subunit low > 76
Dickeya dianthicola 67-19 0.67 HGI48_RS19510 ethanolamine permease 0.53 HGI48_RS18070 3-isopropylmalate dehydratase small subunit low > 71
Dickeya dadantii 3937 0.67 DDA3937_RS19380 ethanolamine permease 0.53 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit low > 74
Dickeya dianthicola ME23 0.67 DZA65_RS20600 ethanolamine permease 0.53 DZA65_RS19215 3-isopropylmalate dehydratase small subunit low > 75
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2300.1 Ethanolamine permease 0.68 Xcc-8004.1050.1 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS24870 ethanolamine permease 0.38 CA265_RS15840 3-isopropylmalate dehydratase small subunit low > 88
Acinetobacter radioresistens SK82 0.27 MPMX26_01769 putative amino acid permease YhdG 0.69 MPMX26_00346 3-isopropylmalate dehydratase small subunit 1
Pseudomonas putida KT2440 0.24 PP_0544 Ethanolamine transporter 0.71 PP_1986 3-isopropylmalate dehydratase small subunit low > 96
Agrobacterium fabrum C58 0.24 Atu2143 ABC transporter, membrane spanning protein (amino acid) 0.49 Atu2790 3-isopropylmalate dehydratase, small subunit low > 89
Pseudomonas stutzeri RCH2 0.23 Psest_0670 ethanolamine permease 0.68 Psest_2590 3-isopropylmalate dehydratase, small subunit low > 67
Sinorhizobium meliloti 1021 0.14 SMc02616 permease transmembrane protein 0.49 SMc03795 isopropylmalate isomerase small subunit low > 103
Ralstonia solanacearum UW163 0.12 UW163_RS15035 amino acid permease 0.78 UW163_RS11110 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum IBSBF1503 0.12 RALBFv3_RS01725 amino acid permease 0.78 RALBFv3_RS02615 3-isopropylmalate dehydratase small subunit low > 76
Ralstonia sp. UNC404CL21Col 0.12 ABZR87_RS13545 amino acid permease 0.80 ABZR87_RS14535 3-isopropylmalate dehydratase small subunit low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_09570 amino acid permease 0.40 CA264_09440 3-isopropylmalate dehydratase small subunit low > 74
Ralstonia solanacearum GMI1000 0.12 RS_RS08000 amino acid permease 0.80 RS_RS09995 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum PSI07 0.11 RPSI07_RS15760 amino acid permease 0.80 RPSI07_RS14700 3-isopropylmalate dehydratase small subunit
Rhodanobacter denitrificans FW104-10B01 0.11 LRK54_RS01520 amino acid permease 0.45 LRK54_RS07370 3-isopropylmalate dehydratase small subunit low > 59
Rhodanobacter denitrificans MT42 0.11 LRK55_RS01310 amino acid permease 0.45 LRK55_RS07100 3-isopropylmalate dehydratase small subunit low > 63
Dyella japonica UNC79MFTsu3.2 0.10 ABZR86_RS16130 amino acid permease 0.36 ABZR86_RS15955 3-isopropylmalate dehydratase small subunit low > 74
Lysobacter sp. OAE881 0.10 ABIE51_RS13260 amino acid permease 0.35 ABIE51_RS17580 3-isopropylmalate dehydratase small subunit low > 62
Caulobacter crescentus NA1000 Δfur 0.10 CCNA_00435 amino acid transporter 0.39 CCNA_00195 3-isopropylmalate dehydratase small subunit low > 67
Caulobacter crescentus NA1000 0.10 CCNA_00435 L-proline transporter (from data) 0.39 CCNA_00195 3-isopropylmalate dehydratase small subunit low > 66
Rhodanobacter sp. FW510-T8 0.10 OKGIIK_05010 potE amino acid permease 0.33 OKGIIK_13590 leuD 3-isopropylmalate dehydratase small subunit low > 52
Rhodopseudomonas palustris CGA009 0.10 TX73_003040 amino acid permease 0.49 TX73_001215 3-isopropylmalate dehydratase small subunit
Mycobacterium tuberculosis H37Rv 0.09 Rv2320c Probable cationic amino acid transport integral membrane protein RocE 0.34 Rv2987c Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Sphingomonas koreensis DSMZ 15582 0.09 Ga0059261_1053 amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) 0.37 Ga0059261_4225 3-isopropylmalate dehydratase, small subunit low > 68
Escherichia coli BW25113 0.09 b0260 ykfD putative amino acid/amine transport protein (VIMSS) 0.54 b0071 leuD isopropylmalate isomerase small subunit (NCBI) low > 76
Escherichia coli BL21 0.09 ECD_03221 putative fructoselysine transporter 0.54 ECD_00073 3-isopropylmalate dehydratase small subunit low > 61
Brevundimonas sp. GW460-12-10-14-LB2 0.09 A4249_RS05420 amino acid permease 0.32 A4249_RS10000 3-isopropylmalate dehydratase small subunit low > 48
Escherichia coli HS(pFamp)R (ATCC 700891) 0.09 OHPLBJKB_00332 putative fructoselysine/psicoselysine transporter FrlA 0.54 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit low > 73
Escherichia coli ECRC101 0.09 MCAODC_07700 frlA fructoselysine/psicoselysine transporter 0.54 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit low > 87
Escherichia coli ECRC99 0.09 KEDOAH_10970 frlA fructoselysine/psicoselysine transporter 0.54 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC98 0.09 JDDGAC_20800 frlA fructoselysine/psicoselysine transporter 0.54 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit low > 86
Escherichia coli ECRC62 0.09 BNILDI_18285 puuP putrescine/proton symporter PuuP 0.54 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit low > 75
Escherichia coli ECRC100 0.09 OKFHMN_17170 frlA fructoselysine/psicoselysine transporter 0.54 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit low > 80
Escherichia coli ECRC102 0.09 NIAGMN_14940 frlA fructoselysine/psicoselysine transporter 0.54 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECOR27 0.09 NOLOHH_20135 puuP putrescine/proton symporter PuuP 0.54 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit low > 75
Erwinia tracheiphila SCR3 0.09 LU632_RS03070 aroP aromatic amino acid transporter AroP 0.51 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.08 ABZR88_RS11630 amino acid permease 0.37 ABZR88_RS11600 3-isopropylmalate dehydratase small subunit
Bosea sp. OAE506 0.07 ABIE41_RS20970 APC family permease 0.48 ABIE41_RS11640 3-isopropylmalate dehydratase small subunit
Castellaniella sp019104865 MT123 0.07 ABCV34_RS10320 amino acid permease 0.67 ABCV34_RS04285 3-isopropylmalate dehydratase small subunit low > 48

Not shown: 1 genomes with orthologs for HSERO_RS12590 only; 33 genomes with orthologs for HSERO_RS16505 only