Conservation of cofitness between HSERO_RS07160 and HSERO_RS15560 in Herbaspirillum seropedicae SmR1

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase 1.0 HSERO_RS15560 phosphoadenosine phosphosulfate reductase 0.89 15
Burkholderia phytofirmans PsJN 0.83 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase 0.58 BPHYT_RS04735 phosphoadenosine phosphosulfate reductase
Paraburkholderia graminis OAS925 0.83 ABIE53_000850 3-deoxy-7-phosphoheptulonate synthase 0.59 ABIE53_001228 phosphoadenosine phosphosulfate reductase 0.57 18
Ralstonia solanacearum GMI1000 0.82 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.55 RS_RS12160 phosphoadenylyl-sulfate reductase low > 80
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG 0.58 QEN71_RS25245 phosphoadenylyl-sulfate reductase low > 153
Ralstonia solanacearum PSI07 0.82 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase 0.55 RPSI07_RS12785 phosphoadenylyl-sulfate reductase
Paraburkholderia bryophila 376MFSha3.1 0.82 H281DRAFT_04687 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.59 H281DRAFT_00116 phosphoadenylylsulfate reductase (thioredoxin) 0.33 81
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG 0.56 ABZR87_RS00200 phosphoadenylyl-sulfate reductase 0.89 5
Ralstonia solanacearum UW163 0.81 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase 0.54 UW163_RS09080 phosphoadenylyl-sulfate reductase
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase 0.54 RALBFv3_RS04590 phosphoadenylyl-sulfate reductase
Cupriavidus basilensis FW507-4G11 0.79 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.57 RR42_RS16260 phosphoadenosine phosphosulfate reductase 0.62 38
Dechlorosoma suillum PS 0.74 Dsui_3444 phospho-2-dehydro-3-deoxyheptonate aldolase 0.53 Dsui_1984 thioredoxin-dependent adenylylsulfate APS reductase
Castellaniella sp019104865 MT123 0.70 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG 0.50 ABCV34_RS14110 phosphoadenylyl-sulfate reductase
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 0.20 Xcc-8004.1256.1 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) low > 74
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase 0.21 ABZR86_RS05895 phosphoadenylyl-sulfate reductase 0.54 73
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase 0.19 OKGIIK_05970 cysH phosphoadenylyl-sulfate reductase 0.61 8
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase 0.19 LRK54_RS00920 phosphoadenylyl-sulfate reductase 0.30 13
Rhodanobacter denitrificans MT42 0.67 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase 0.19 LRK55_RS00695 phosphoadenylyl-sulfate reductase low > 63
Escherichia coli ECRC100 0.67 OKFHMN_06740 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 OKFHMN_20380 cysH phosphoadenosine phosphosulfate reductase low > 80
Escherichia coli ECRC101 0.67 MCAODC_25960 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 MCAODC_10905 cysH phosphoadenosine phosphosulfate reductase low > 87
Escherichia coli BL21 0.67 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 0.17 ECD_02607 phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent low > 61
Escherichia coli ECOR27 0.67 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.17 NOLOHH_12195 cysH phosphoadenosine phosphosulfate reductase low > 75
Escherichia coli ECRC99 0.67 KEDOAH_21225 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 KEDOAH_07745 cysH phosphoadenosine phosphosulfate reductase
Escherichia coli ECRC62 0.67 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.17 BNILDI_10745 cysH phosphoadenosine phosphosulfate reductase low > 75
Escherichia coli BW25113 0.67 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) 0.17 b2762 cysH phosphoadenosine phosphosulfate reductase (NCBI) low > 76
Escherichia coli ECRC98 0.67 JDDGAC_10395 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 JDDGAC_24045 cysH phosphoadenosine phosphosulfate reductase low > 86
Escherichia coli ECRC102 0.67 NIAGMN_04790 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 NIAGMN_18150 cysH phosphoadenosine phosphosulfate reductase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.17 OHPLBJKB_00971 Phosphoadenosine phosphosulfate reductase low > 73
Escherichia coli ECOR38 0.66 HEPCGN_01535 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.17 HEPCGN_19085 cysH phosphoadenosine phosphosulfate reductase low > 87
Serratia liquefaciens MT49 0.66 IAI46_06405 3-deoxy-7-phosphoheptulonate synthase AroG 0.17 IAI46_03695 phosphoadenylyl-sulfate reductase low > 86
Pantoea sp. MT58 0.66 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG 0.17 IAI47_04160 phosphoadenylyl-sulfate reductase low > 76
Rahnella sp. WP5 0.66 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG 0.19 EX31_RS07895 phosphoadenylyl-sulfate reductase low > 89
Escherichia coli Nissle 1917 0.66 ECOLIN_RS04015 3-deoxy-7-phosphoheptulonate synthase AroG 0.17 ECOLIN_RS15400 phosphoadenosine phosphosulfate reductase
Escherichia fergusonii Becca 0.66 EFB2_03352 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.17 EFB2_01155 Phosphoadenosine phosphosulfate reductase low > 86
Dickeya dianthicola ME23 0.66 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 DZA65_RS18080 phosphoadenylyl-sulfate reductase low > 75
Pectobacterium carotovorum WPP14 0.66 HER17_RS14805 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 HER17_RS04245 phosphoadenylyl-sulfate reductase low > 75
Klebsiella michiganensis M5al 0.66 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase 0.19 BWI76_RS22755 phosphoadenosine phosphosulfate reductase low > 92
Dickeya dianthicola 67-19 0.66 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 HGI48_RS17005 phosphoadenylyl-sulfate reductase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF8 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.17 GFF4818 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)
Dickeya dadantii 3937 0.66 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG 0.18 DDA3937_RS16935 phosphoadenylyl-sulfate reductase low > 74
Shewanella loihica PV-4 0.65 Shew_0851 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.17 Shew_0667 phosphoadenosine phosphosulfate reductase (RefSeq) low > 60
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.18 EX28DRAFT_2851 phosphoadenosine phosphosulfate reductase, thioredoxin dependent low > 76
Shewanella oneidensis MR-1 0.65 SO0756 aroG phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) 0.17 SO3736 cysH phosphoadenosine phosphosulfate reductase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase 0.19 CSW01_02020 phosphoadenosine phosphosulfate reductase low > 62
Enterobacter sp. TBS_079 0.64 MPMX20_01381 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.18 MPMX20_03641 Phosphoadenosine phosphosulfate reductase low > 85
Erwinia tracheiphila SCR3 0.64 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.17 LU632_RS06410 phosphoadenylyl-sulfate reductase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.44 GFF4291 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) low > 90
Acinetobacter radioresistens SK82 0.50 MPMX26_01673 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.36 MPMX26_00649 Phosphoadenosine phosphosulfate reductase low > 36
Synechococcus elongatus PCC 7942 0.50 Synpcc7942_2501 aroF phospho-2-dehydro-3-heoxyheptonate aldolase 0.17 Synpcc7942_2506 par phosphoadenosine phosphosulfate reductase
Pseudomonas stutzeri RCH2 0.50 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase 0.36 Psest_2328 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase
Pseudomonas putida KT2440 0.50 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 0.36 PP_2328 Phosphoadenosine phosphosulfate reductase 0.38 14
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.36 Psyr_2078 phosphoadenylylsulfate reductase (thioredoxin)
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.36 Psyr_2078 phosphoadenylylsulfate reductase (thioredoxin)
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_19030 phospho-2-dehydro-3-deoxyheptonate aldolase 0.37 AO353_00935 phosphoadenosine phosphosulfate reductase
Pseudomonas simiae WCS417 0.48 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.36 PS417_21125 phosphoadenosine phosphosulfate reductase 0.38 38
Pseudomonas fluorescens SBW25 0.48 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.36 PFLU_RS22740 phosphoadenylyl-sulfate reductase low > 109
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_2470 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.36 Pf6N2E2_6054 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase 0.36 AO356_20830 phosphoadenosine phosphosulfate reductase low > 104
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.36 PFLU_RS22740 phosphoadenylyl-sulfate reductase low > 109
Pseudomonas sp. RS175 0.48 PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.36 PFR28_02935 Phosphoadenosine phosphosulfate reductase
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_2224 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.37 PfGW456L13_4125 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) low > 87
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_289 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.37 Pf1N1B4_3812 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) low > 87
Alteromonas macleodii MIT1002 0.47 MIT1002_01314 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.18 MIT1002_03378 Phosphoadenosine phosphosulfate reductase
Marinobacter adhaerens HP15 0.47 HP15_1814 phospho-2-dehydro-3-heoxyheptonate aldolase 0.38 HP15_1853 phosphoadenosine phosphosulfate reductase
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1384 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.18 B158DRAFT_2162 phosphoadenosine phosphosulfate reductase, thioredoxin dependent low > 40

Not shown: 10 genomes with orthologs for HSERO_RS07160 only; 12 genomes with orthologs for HSERO_RS15560 only