| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS01325 | | cation/multidrug efflux protein | 1.0 | HSERO_RS08800 | | NAD(P)H quinone oxidoreductase | 0.36 | 14 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.73 | H281DRAFT_05197 | | Multidrug efflux pump subunit AcrB | 0.69 | H281DRAFT_04563 | | NADPH2:quinone reductase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.72 | ABIE53_002354 | | multidrug efflux pump | 0.69 | ABIE53_001587 | | NADPH2:quinone reductase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS07190 | | efflux RND transporter permease subunit | 0.72 | QEN71_RS24170 | | NAD(P)H-quinone oxidoreductase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.71 | BPHYT_RS11375 | | acriflavin resistance protein | 0.69 | BPHYT_RS06605 | | NAD(P)H quinone oxidoreductase | low | > 109 |
| Dyella japonica UNC79MFTsu3.2 | 0.67 | ABZR86_RS11125 | | efflux RND transporter permease subunit | 0.49 | ABZR86_RS09640 | | NAD(P)H-quinone oxidoreductase | low | > 74 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS06185 | | efflux RND transporter permease subunit | 0.50 | PFLU_RS11790 | | zinc-binding dehydrogenase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS06185 | | efflux RND transporter permease subunit | 0.50 | PFLU_RS11790 | | zinc-binding dehydrogenase | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_1566 | | Cation/multidrug efflux pump | 0.34 | Psest_2950 | | putative NAD(P)H quinone oxidoreductase, PIG3 family | low | > 67 |
| Pseudomonas simiae WCS417 | 0.50 | PS417_06115 | | multidrug transporter AcrB | 0.51 | PS417_11195 | | NAD(P)H-quinone oxidoreductase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_16365 | | multidrug transporter AcrB | 0.33 | AO353_02435 | | NAD(P)H-quinone oxidoreductase | low | > 101 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_06740 | | Multidrug efflux system, inner membrane proton/drug antiporter (RND type) | 0.34 | OH686_19715 | | Quinone oxidoreductase | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_3063 | | RND efflux transporter | 0.35 | Pf1N1B4_3742 | | Oxidoreductase, zinc-binding | low | > 87 |
| Pseudomonas putida KT2440 | 0.49 | PP_1517 | | RND efflux transporter | 0.33 | PP_1720 | | Alcohol dehydrogenase, zinc-containing | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_06130 | | multidrug transporter AcrB | 0.33 | AO356_19340 | | NAD(P)H-quinone oxidoreductase | low | > 104 |
| Acinetobacter radioresistens SK82 | 0.49 | MPMX26_03010 | | Cobalt-zinc-cadmium resistance protein CzcA | 0.50 | MPMX26_02323 | | Phthiocerol synthesis polyketide synthase type I PpsC | low | > 36 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_3091 | | RND efflux transporter | 0.33 | Pf6N2E2_5781 | | Oxidoreductase, zinc-binding | low | > 103 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_00379 | | Cobalt-zinc-cadmium resistance protein CzcA | 0.34 | PFR28_03168 | | Phthiocerol synthesis polyketide synthase type I PpsC | low | > 88 |
| Azospirillum sp. SherDot2 | 0.48 | MPMX19_05260 | | Cobalt-zinc-cadmium resistance protein CzcA | 0.63 | MPMX19_01406 | | Quinone oxidoreductase 1 | low | > 112 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS14695 | | AcrB/AcrD/AcrF family protein | 0.72 | UW163_RS10730 | | NAD(P)H-quinone oxidoreductase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS01385 | | AcrB/AcrD/AcrF family protein | 0.72 | RALBFv3_RS02995 | | NAD(P)H-quinone oxidoreductase | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS13180 | | efflux RND transporter permease subunit | 0.72 | ABZR87_RS14900 | | NAD(P)H-quinone oxidoreductase | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS07915 | | multidrug transporter AcrB | 0.72 | RR42_RS05490 | | NAD(P)H-quinone oxidoreductase | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS16100 | | AcrB/AcrD/AcrF family protein | 0.73 | RPSI07_RS14315 | | NAD(P)H-quinone oxidoreductase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS08335 | | AcrB/AcrD/AcrF family protein | 0.73 | RS_RS10365 | | NAD(P)H quinone oxidoreductase | low | > 80 |
| Rhodopseudomonas palustris CGA009 | 0.44 | TX73_022880 | | efflux RND transporter permease subunit | 0.55 | TX73_004720 | | NAD(P)H-quinone oxidoreductase | low | > 86 |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_933 | | Probable transmembrane drug efflux protein | 0.65 | Ac3H11_1455 | | Quinone oxidoreductase (EC 1.6.5.5) | low | > 79 |
| Variovorax sp. SCN45 | 0.43 | GFF493 | | RND efflux system, inner membrane transporter | 0.69 | GFF4747 | | Quinone oxidoreductase (EC 1.6.5.5) | low | > 127 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS17615 | | efflux RND transporter permease subunit | 0.68 | ABID97_RS20515 | | NAD(P)H-quinone oxidoreductase | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF4033 | | Probable transmembrane drug efflux protein | 0.69 | GFF3678 | | Quinone oxidoreductase (EC 1.6.5.5) | low | > 90 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_0346 | | Acriflavin resistance protein | 0.33 | Psyr_1600 | | Zinc-containing alcohol dehydrogenase superfamily | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_0346 | | Acriflavin resistance protein | 0.33 | Psyr_1600 | | Zinc-containing alcohol dehydrogenase superfamily | low | > 86 |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS17045 | | efflux RND transporter permease subunit | 0.52 | ABIE40_RS04545 | | NAD(P)H-quinone oxidoreductase | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.42 | SM_b20345 | | efflux protein | 0.54 | SMc00034 | | oxidoreductase | low | > 103 |
| Agrobacterium fabrum C58 | 0.40 | Atu5381 | | AcrB/AcrD/AcrF family protein | 0.57 | Atu0825 | | quinone oxidoreductase | — | — |
| Pectobacterium carotovorum WPP14 | 0.38 | HER17_RS07500 | | efflux RND transporter permease subunit | 0.20 | HER17_RS13680 | | NAD(P)-dependent alcohol dehydrogenase | low | > 75 |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS18635 | | efflux RND transporter permease subunit | 0.59 | ABIE41_RS01375 | | NAD(P)H-quinone oxidoreductase | low | > 77 |
| Dickeya dianthicola 67-19 | 0.35 | HGI48_RS07915 | | efflux RND transporter permease subunit | 0.19 | HGI48_RS03970 | | zinc-binding alcohol dehydrogenase family protein | low | > 71 |
| Klebsiella michiganensis M5al | 0.35 | BWI76_RS05720 | | cation/multidrug efflux pump | 0.19 | BWI76_RS27960 | | alcohol dehydrogenase protein | low | > 92 |
| Enterobacter sp. TBS_079 | 0.35 | MPMX20_02160 | | Nickel and cobalt resistance protein CnrA | 0.19 | MPMX20_00006 | | Alcohol dehydrogenase | low | > 85 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.35 | Xcc-8004.557.1 | | cation efflux system protein | 0.43 | Xcc-8004.4333.1 | | quinone reductase | low | > 74 |
| Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_1393 | | Cation/multidrug efflux pump | 0.19 | EX28DRAFT_3984 | | NADPH:quinone reductase and related Zn-dependent oxidoreductases | low | > 76 |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS32765 | | multidrug transporter | 0.62 | AZOBR_RS06200 | | NAD(P)H quinone oxidoreductase | low | > 97 |
| Caulobacter crescentus NA1000 Δfur | 0.34 | CCNA_01866 | | cation/multidrug efflux pump acrB4 | 0.43 | CCNA_03402 | | NAD(P)H quinone oxidoreductase, PIG3 family | low | > 67 |
| Caulobacter crescentus NA1000 | 0.34 | CCNA_01866 | | cation/multidrug efflux pump acrB4 | 0.43 | CCNA_03402 | | NAD(P)H quinone oxidoreductase, PIG3 family | low | > 66 |
| Marinobacter adhaerens HP15 | 0.33 | HP15_1118 | | transporter, AcrB/D/F family | 0.36 | HP15_1149 | | quinone oxidoreductase putative, PIG3 | low | > 73 |
| Shewanella sp. ANA-3 | 0.26 | Shewana3_3849 | | acriflavin resistance protein (RefSeq) | 0.47 | Shewana3_3581 | | response regulator receiver protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.25 | Shew_0466 | | acriflavin resistance protein (RefSeq) | 0.41 | Shew_3274 | | alcohol dehydrogenase (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.25 | MIT1002_01561 | | Swarming motility protein SwrC | 0.33 | MIT1002_01689 | | Beta-ketoacyl-acyl-carrier-protein synthase I | low | > 70 |
| Shewanella amazonensis SB2B | 0.25 | Sama_0675 | | AcrB/AcrD/AcrF family transporter (RefSeq) | 0.44 | Sama_0533 | | alcohol dehydrogenase, zinc-containing (RefSeq) | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_1262 | | acriflavin resistance protein (RefSeq) | 0.57 | Dshi_0248 | | Quinone oxidoreductase putative PIG3 (RefSeq) | low | > 64 |
| Fusobacterium nucleatum SB010 | 0.21 | HUW76_07495 | | efflux RND transporter permease subunit | 0.16 | HUW76_01095 | | zinc-binding dehydrogenase | low | > 35 |
| Phaeobacter inhibens DSM 17395 | 0.21 | PGA1_c24610 | | integral membrane protein, AcrB/AcrD/AcrF family | 0.58 | PGA1_c30350 | | putative quinone oxidoreductase | low | > 62 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.20 | CA264_20140 | | acriflavin resistance protein | 0.39 | CA264_19670 | | NADPH:quinone oxidoreductase | low | > 74 |
| Shewanella oneidensis MR-1 | 0.15 | SO3279 | | AcrB/AcrD/AcrF family protein (NCBI ptt file) | 0.44 | SO0640 | | alcohol dehydrogenase, zinc-containing (NCBI ptt file) | low | > 76 |
Not shown: 14 genomes with orthologs for HSERO_RS01325 only; 14 genomes with orthologs for HSERO_RS08800 only