Conservation of cofitness between HSERO_RS21535 and HSERO_RS02145 in Herbaspirillum seropedicae SmR1

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21535 NADH dehydrogenase 1.0 HSERO_RS02145 ferritin 0.45 9
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS26840 NADH dehydrogenase 0.83 BPHYT_RS03480 ferritin 0.36 46
Paraburkholderia graminis OAS925 0.74 ABIE53_005905 alkyl hydroperoxide reductase subunit F 0.82 ABIE53_000838 starvation-inducible DNA-binding protein 0.17 25
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_02889 alkyl hydroperoxide reductase subunit F 0.82 H281DRAFT_04677 starvation-inducible DNA-binding protein
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS13375 alkyl hydroperoxide reductase subunit F 0.80 QEN71_RS26610 Dps family protein low > 153
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS17240 alkyl hydroperoxide reductase subunit F 0.80 ABZR87_RS01245 Dps family protein 0.52 13
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_22810 alkyl hydroperoxide reductase subunit F 0.76 AO356_17990 ferritin low > 104
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_448 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.76 Pf6N2E2_5529 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 103
Pseudomonas sp. RS175 0.71 PFR28_02481 Alkyl hydroperoxide reductase subunit F 0.76 PFR28_03419 DNA protection during starvation protein 2 low > 88
Pseudomonas simiae WCS417 0.71 PS417_14040 alkyl hydroperoxide reductase 0.76 PS417_22480 ferritin low > 88
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS22265 alkyl hydroperoxide reductase subunit F 0.76 RALBFv3_RS05595 DNA starvation/stationary phase protection protein low > 76
Ralstonia solanacearum UW163 0.71 UW163_RS22810 alkyl hydroperoxide reductase subunit F 0.76 UW163_RS08030 DNA starvation/stationary phase protection protein
Pseudomonas stutzeri RCH2 0.71 Psest_1134 alkyl hydroperoxide reductase, F subunit 0.73 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) low > 67
Ralstonia solanacearum GMI1000 0.71 RS_RS18340 alkyl hydroperoxide reductase subunit F 0.76 RS_RS13455 DNA starvation/stationary phase protection protein low > 80
Azospirillum sp. SherDot2 0.71 MPMX19_05836 Alkyl hydroperoxide reductase subunit F 0.67 MPMX19_02373 DNA protection during starvation protein 2 0.39 71
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS00710 alkyl hydroperoxide reductase subunit F 0.58 LRK54_RS12710 DNA starvation/stationary phase protection protein 0.31 23
Rhodanobacter denitrificans MT42 0.71 LRK55_RS00485 alkyl hydroperoxide reductase subunit F 0.57 LRK55_RS12415 Dps family protein low > 63
Ralstonia solanacearum PSI07 0.70 RPSI07_RS00935 alkyl hydroperoxide reductase subunit F 0.76 RPSI07_RS11705 DNA starvation/stationary phase protection protein 0.49 71
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_06550 ahpF alkyl hydroperoxide reductase subunit F 0.58 OKGIIK_02150 dps DNA-binding ferritin-like protein (oxidative damage protectant) low > 52
Pseudomonas putida KT2440 0.70 PP_2440 Alkyl hydroperoxide reductase subunit F 0.74 PP_1210 DNA-binding stress protein low > 96
Castellaniella sp019104865 MT123 0.70 ABCV34_RS09915 alkyl hydroperoxide reductase subunit F 0.61 ABCV34_RS03580 Dps family protein low > 48
Azospirillum brasilense Sp245 0.69 AZOBR_RS20515 alkyl hydroperoxide reductase subunit F 0.69 AZOBR_RS12945 ferritin
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.75 Psyr_1404 Ferritin and Dps low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.75 Psyr_1404 Ferritin and Dps low > 86
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS08495 alkyl hydroperoxide reductase subunit F 0.59 ABZR86_RS19715 Dps family protein low > 74
Pseudomonas fluorescens SBW25 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.77 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.77 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Lysobacter sp. OAE881 0.69 ABIE51_RS05480 alkyl hydroperoxide reductase subunit F 0.65 ABIE51_RS05150 Dps family protein low > 62
Rhodospirillum rubrum S1H 0.68 Rru_A1417 thioredoxin-disulfide reductase (NCBI) 0.74 Rru_A0333 Ferritin and Dps (NCBI) low > 58
Pseudomonas sp. S08-1 0.68 OH686_18675 alkyl hydroperoxide reductase subunit F 0.75 OH686_19105 DNA protection during starvation protein low > 80
Variovorax sp. SCN45 0.67 GFF2825 Alkyl hydroperoxide reductase protein F 0.60 GFF5550 DNA protection during starvation protein low > 127
Dechlorosoma suillum PS 0.67 Dsui_1902 alkyl hydroperoxide reductase, F subunit 0.74 Dsui_0822 DNA-binding ferritin-like protein (oxidative damage protectant) low > 51
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.4222.1 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.64 Xcc-8004.1478.1 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 74
Acidovorax sp. GW101-3H11 0.66 Ac3H11_232 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.68 Ac3H11_786 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3915 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.66 GFF2804 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 90
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.51 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase low > 67
Caulobacter crescentus NA1000 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.51 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase low > 66
Marinobacter adhaerens HP15 0.64 HP15_3619 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.29 HP15_3253 ferritin-like DNA-binding protein low > 73
Shewanella sp. ANA-3 0.62 Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.64 Shewana3_0985 Ferritin, Dps family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO0956 ahpF alkyl hydroperoxide reductase, F subunit (NCBI ptt file) 0.64 SO1158 Dps family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.61 Sama_0618 alkyl hydroperoxide reductase, F subunit (RefSeq) 0.59 Sama_2598 Dps family protein (RefSeq) low > 62
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2349 alkyl hydroperoxide reductase subunit F 0.15 EX28DRAFT_2174 DNA-binding ferritin-like protein (oxidative damage protectant) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03099 Alkyl hydroperoxide reductase subunit F 0.15 OHPLBJKB_02901 DNA protection during starvation protein low > 73
Escherichia coli ECRC62 0.60 BNILDI_21890 Alkyl hydroperoxide reductase subunit F 0.15 BNILDI_20835 dps DNA starvation/stationary phase protection protein Dps low > 75
Escherichia coli ECOR38 0.60 HEPCGN_00775 Alkyl hydroperoxide reductase subunit F 0.15 HEPCGN_01835 dps DNA starvation/stationary phase protection protein Dps low > 87
Escherichia coli ECRC100 0.60 OKFHMN_07505 Alkyl hydroperoxide reductase subunit F 0.15 OKFHMN_06205 dps DNA starvation/stationary phase protection protein Dps low > 80
Escherichia coli ECRC102 0.60 NIAGMN_05560 Alkyl hydroperoxide reductase subunit F 0.15 NIAGMN_04250 dps DNA starvation/stationary phase protection protein Dps
Escherichia coli ECOR27 0.60 NOLOHH_23880 Alkyl hydroperoxide reductase subunit F 0.15 NOLOHH_22555 dps DNA starvation/stationary phase protection protein Dps low > 75
Escherichia coli ECRC98 0.60 JDDGAC_11150 Alkyl hydroperoxide reductase subunit F 0.15 JDDGAC_09840 dps DNA starvation/stationary phase protection protein Dps low > 86
Escherichia fergusonii Becca 0.60 EFB2_03485 Alkyl hydroperoxide reductase subunit F 0.15 EFB2_03293 DNA protection during starvation protein low > 86
Escherichia coli ECRC99 0.60 KEDOAH_20465 Alkyl hydroperoxide reductase subunit F 0.15 KEDOAH_21705 dps DNA starvation/stationary phase protection protein Dps
Escherichia coli ECRC101 0.60 MCAODC_26720 Alkyl hydroperoxide reductase subunit F 0.15 MCAODC_25420 dps DNA starvation/stationary phase protection protein Dps low > 87
Escherichia coli BL21 0.60 ECD_00575 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 0.15 ECD_00779 Fe-binding and storage protein; stress-inducible DNA-binding protein low > 61
Escherichia coli BW25113 0.60 b0606 ahpF alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) 0.15 b0812 dps DNA protection during starvation conditions (NCBI) low > 76
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03325 alkyl hydroperoxide reductase subunit F 0.16 ECOLIN_RS04330 DNA starvation/stationary phase protection protein Dps
Enterobacter sp. TBS_079 0.60 MPMX20_01272 Alkyl hydroperoxide reductase subunit F 0.15 MPMX20_01442 DNA protection during starvation protein 0.33 28
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4514 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.15 GFF707 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 78
Acinetobacter radioresistens SK82 0.59 MPMX26_02042 Alkyl hydroperoxide reductase subunit F 0.66 MPMX26_01495 DNA protection during starvation protein 2 low > 36
Dickeya dianthicola ME23 0.59 DZA65_RS02570 alkyl hydroperoxide reductase subunit F 0.30 DZA65_RS07220 DNA starvation/stationary phase protection protein low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS02465 alkyl hydroperoxide reductase subunit F 0.30 HGI48_RS06880 DNA starvation/stationary phase protection protein low > 71
Dickeya dadantii 3937 0.59 DDA3937_RS02520 alkyl hydroperoxide reductase subunit F 0.31 DDA3937_RS06890 DNA starvation/stationary phase protection protein low > 74
Alteromonas macleodii MIT1002 0.46 MIT1002_01785 NADH dehydrogenase 0.57 MIT1002_00525 DNA protection during starvation protein 2 low > 70
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0279 alkyl hydroperoxide reductase, F subunit 0.61 B158DRAFT_0476 DNA-binding ferritin-like protein (oxidative damage protectant) 0.74 3
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2811 alkyl hydroperoxide reductase subunit F (NCBI ptt file) 0.26 BT4715 non-specific DNA-binding protein Dps (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.42 BACOVA_02067 alkyl hydroperoxide reductase, F subunit 0.26 BACOVA_05566 DNA protection during starvation protein low > 94
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS04200 alkyl hydroperoxide reductase subunit F 0.25 HMPREF1078_RS01145 Dps family protein low > 61
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS02150 alkyl hydroperoxide reductase subunit F 0.26 HMPREF1181_RS02165 DNA starvation/stationary phase protection protein low > 56
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS03990 alkyl hydroperoxide reductase subunit F 0.27 ABI39_RS06080 DNA starvation/stationary phase protection protein low > 72

Not shown: 10 genomes with orthologs for HSERO_RS21535 only; 16 genomes with orthologs for HSERO_RS02145 only