Conservation of cofitness between HER17_RS02810 and HER17_RS12010 in Pectobacterium carotovorum WPP14

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02810 peroxide stress protein YaaA 1.0 HER17_RS12010 aminopeptidase N 0.88 2
Dickeya dadantii 3937 0.84 DDA3937_RS18400 peroxide stress protein YaaA 0.85 DDA3937_RS12885 aminopeptidase N low > 74
Escherichia coli ECOR38 0.82 HEPCGN_09095 yaaA peroxide stress protein YaaA 0.78 HEPCGN_23160 pepN aminopeptidase N low > 87
Dickeya dianthicola ME23 0.82 DZA65_RS19470 peroxide stress protein YaaA 0.84 DZA65_RS13420 aminopeptidase N low > 75
Escherichia coli Nissle 1917 0.82 ECOLIN_RS00035 peroxide stress protein YaaA 0.78 ECOLIN_RS04935 aminopeptidase N low > 55
Enterobacter sp. TBS_079 0.82 MPMX20_00714 Peroxide stress resistance protein YaaA 0.77 MPMX20_01590 Aminopeptidase N low > 85
Escherichia fergusonii Becca 0.82 EFB2_04037 Peroxide stress resistance protein YaaA 0.78 EFB2_03132 Aminopeptidase N low > 86
Escherichia coli ECRC100 0.82 OKFHMN_11090 yaaA peroxide stress protein YaaA 0.78 OKFHMN_05365 pepN aminopeptidase N low > 80
Escherichia coli ECRC102 0.82 NIAGMN_08940 yaaA peroxide stress protein YaaA 0.78 NIAGMN_03085 pepN aminopeptidase N — —
Escherichia coli ECRC99 0.82 KEDOAH_17065 yaaA peroxide stress protein YaaA 0.78 KEDOAH_22370 pepN aminopeptidase N — —
Escherichia coli BL21 0.82 ECD_00006 peroxide resistance protein, lowers intracellular iron 0.78 ECD_00936 aminopeptidase N low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_03654 hypothetical protein 0.78 OHPLBJKB_02734 Aminopeptidase N low > 73
Escherichia coli ECRC101 0.82 MCAODC_01605 yaaA peroxide stress protein YaaA 0.78 MCAODC_24755 pepN aminopeptidase N low > 87
Dickeya dianthicola 67-19 0.82 HGI48_RS18330 peroxide stress protein YaaA 0.84 HGI48_RS12955 aminopeptidase N low > 71
Escherichia coli ECRC98 0.82 JDDGAC_14685 yaaA peroxide stress protein YaaA 0.78 JDDGAC_08975 pepN aminopeptidase N low > 86
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria 0.78 EX28DRAFT_2004 aminopeptidase N, Escherichia coli type low > 76
Escherichia coli ECRC62 0.81 BNILDI_08185 yaaA peroxide stress protein YaaA 0.78 BNILDI_20175 pepN aminopeptidase N low > 75
Escherichia coli ECOR27 0.81 NOLOHH_03420 yaaA peroxide stress protein YaaA 0.78 NOLOHH_21920 pepN aminopeptidase N low > 75
Escherichia coli BW25113 0.81 b0006 yaaA hypothetical protein (NCBI) 0.78 b0932 pepN aminopeptidase N (NCBI) low > 76
Serratia liquefaciens MT49 0.80 IAI46_03045 peroxide stress protein YaaA 0.80 IAI46_08775 aminopeptidase N low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS04260 peroxide stress protein YaaA 0.76 BWI76_RS09890 aminopeptidase N low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1081 UPF0246 protein YaaA 0.77 GFF3235 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 78
Pantoea sp. MT58 0.79 IAI47_16200 peroxide stress protein YaaA 0.77 IAI47_12745 aminopeptidase N low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS02625 yaaA peroxide stress protein YaaA 0.75 LU632_RS09930 pepN aminopeptidase N low > 74
Rahnella sp. WP5 0.76 EX31_RS03930 peroxide stress protein YaaA 0.80 EX31_RS18125 aminopeptidase N low > 89
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11930 peroxide stress protein YaaA 0.65 CSW01_07505 aminopeptidase N low > 62
Marinobacter adhaerens HP15 0.69 HP15_1223 protein YaaA 0.46 HP15_1065 aminopeptidase N low > 73
Acinetobacter radioresistens SK82 0.68 MPMX26_02017 Peroxide stress resistance protein YaaA 0.36 MPMX26_01760 Aminopeptidase N low > 36
Pseudomonas putida KT2440 0.67 PP_1289 conserved protein of unknown function, DUF328 family 0.49 PP_2017 aminopeptidase N low > 96
Pseudomonas sp. RS175 0.67 PFR28_03554 Peroxide stress resistance protein YaaA 0.48 PFR28_01574 Aminopeptidase N low > 88
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_04675 hypothetical protein 0.48 AO353_23630 aminopeptidase low > 101
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17320 hypothetical protein 0.49 AO356_24560 aminopeptidase low > 104
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_1686 UPF0246 protein YaaA 0.48 PfGW456L13_3325 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 87
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_5389 UPF0246 protein YaaA 0.48 Pf6N2E2_604 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 103
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_981 UPF0246 protein YaaA 0.47 Pf1N1B4_4614 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 87
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1064 Protein of unknown function DUF328 0.48 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1064 Protein of unknown function DUF328 0.48 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase low > 86
Pseudomonas simiae WCS417 0.65 PS417_04850 hypothetical protein 0.48 PS417_12395 aminopeptidase N low > 88
Pseudomonas stutzeri RCH2 0.64 Psest_3173 Uncharacterized protein conserved in bacteria 0.48 Psest_1922 aminopeptidase N, Escherichia coli type low > 67
Shewanella loihica PV-4 0.64 Shew_1093 hypothetical protein (RefSeq) 0.56 Shew_1803 aminopeptidase N (RefSeq) low > 60
Pseudomonas sp. S08-1 0.64 OH686_07085 UPF0246 protein YaaA 0.48 OH686_04270 aminopeptidase N low > 80
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.49 PFLU_RS13095 aminopeptidase N low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.49 PFLU_RS13095 aminopeptidase N low > 109
Shewanella amazonensis SB2B 0.63 Sama_0917 hypothetical protein (RefSeq) 0.52 Sama_1586 pepN aminopeptidase N (RefSeq) low > 62
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS14635 peroxide stress protein YaaA 0.45 ABZR87_RS15120 aminopeptidase N low > 80
Alteromonas macleodii MIT1002 0.60 MIT1002_03077 hypothetical protein 0.45 MIT1002_02028 Aminopeptidase N low > 70
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14595 peroxide stress protein YaaA 0.46 RPSI07_RS14040 aminopeptidase N low > 81
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02720 peroxide stress protein YaaA 0.46 RALBFv3_RS03270 aminopeptidase N low > 76
Ralstonia solanacearum UW163 0.59 UW163_RS11005 peroxide stress protein YaaA 0.46 UW163_RS10455 aminopeptidase N — —
Ralstonia solanacearum GMI1000 0.59 RS_RS10095 peroxide stress protein YaaA 0.46 RS_RS10660 aminopeptidase N low > 80
Paraburkholderia graminis OAS925 0.58 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) 0.44 ABIE53_003216 aminopeptidase N low > 113
Dechlorosoma suillum PS 0.58 Dsui_2322 hypothetical protein 0.44 Dsui_2287 aminopeptidase N low > 51
Shewanella sp. ANA-3 0.58 Shewana3_3143 hypothetical protein (RefSeq) 0.55 Shewana3_1779 pepN aminopeptidase N (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04599 hypothetical protein 0.45 H281DRAFT_03988 alanyl aminopeptidase. Metallo peptidase. MEROPS family M01 low > 103
Shewanella oneidensis MR-1 0.57 SO3540 conserved hypothetical protein (NCBI ptt file) 0.55 SO2600 pepN aminopeptidase N (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS06780 hypothetical protein 0.45 BPHYT_RS15210 aminopeptidase N low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS24000 peroxide stress protein YaaA 0.44 QEN71_RS03785 aminopeptidase N low > 153
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS05780 hypothetical protein 0.46 RR42_RS05200 aminopeptidase N low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF720 UPF0246 protein YaaA 0.40 GFF275 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 90
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1593 UPF0246 protein YaaA 0.42 Ac3H11_2633 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 79
Caulobacter crescentus NA1000 0.48 CCNA_03496 hypothetical protein 0.39 CCNA_02566 membrane alanine aminopeptidase low > 66
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_03496 hypothetical protein 0.39 CCNA_02566 membrane alanine aminopeptidase low > 67
Variovorax sp. SCN45 0.48 GFF6020 UPF0246 protein YaaA 0.42 GFF3118 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 127
Variovorax sp. OAS795 0.47 ABID97_RS07905 peroxide stress protein YaaA 0.42 ABID97_RS21770 aminopeptidase N low > 91
Castellaniella sp019104865 MT123 0.47 ABCV34_RS01170 peroxide stress protein YaaA 0.39 ABCV34_RS02570 aminopeptidase N low > 48
Dinoroseobacter shibae DFL-12 0.43 Dshi_3333 protein of unknown function DUF328 (RefSeq) 0.39 Dshi_1223 aminopeptidase N (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.43 PGA1_c31890 Uncharacterized protein conserved in bacteria 0.38 PGA1_c09880 aminopeptidase N low > 62

Not shown: 8 genomes with orthologs for HER17_RS02810 only; 12 genomes with orthologs for HER17_RS12010 only