Conservation of cofitness between HER17_RS02810 and HER17_RS02635 in Pectobacterium carotovorum WPP14

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02810 peroxide stress protein YaaA 1.0 HER17_RS02635 glutathione synthase 0.84 20
Dickeya dadantii 3937 0.84 DDA3937_RS18400 peroxide stress protein YaaA 0.91 DDA3937_RS18560 glutathione synthase low > 74
Escherichia coli Nissle 1917 0.82 ECOLIN_RS00035 peroxide stress protein YaaA 0.81 ECOLIN_RS16395 glutathione synthase — —
Enterobacter sp. TBS_079 0.82 MPMX20_00714 Peroxide stress resistance protein YaaA 0.80 MPMX20_03805 Glutathione synthetase low > 85
Dickeya dianthicola ME23 0.82 DZA65_RS19470 peroxide stress protein YaaA 0.91 DZA65_RS19630 glutathione synthase low > 75
Escherichia coli ECOR38 0.82 HEPCGN_09095 yaaA peroxide stress protein YaaA 0.81 HEPCGN_18580 gshB glutathione synthase low > 87
Escherichia fergusonii Becca 0.82 EFB2_04037 Peroxide stress resistance protein YaaA 0.81 EFB2_00955 Glutathione synthetase low > 86
Escherichia coli ECRC100 0.82 OKFHMN_11090 yaaA peroxide stress protein YaaA 0.81 OKFHMN_19275 gshB glutathione synthase low > 80
Escherichia coli ECRC98 0.82 JDDGAC_14685 yaaA peroxide stress protein YaaA 0.81 JDDGAC_22905 gshB glutathione synthase low > 86
Escherichia coli BL21 0.82 ECD_00006 peroxide resistance protein, lowers intracellular iron 0.81 ECD_02777 glutathione synthetase low > 61
Escherichia coli ECRC102 0.82 NIAGMN_08940 yaaA peroxide stress protein YaaA 0.81 NIAGMN_17040 gshB glutathione synthase — —
Escherichia coli ECRC101 0.82 MCAODC_01605 yaaA peroxide stress protein YaaA 0.81 MCAODC_09795 gshB glutathione synthase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_03654 hypothetical protein 0.81 OHPLBJKB_00771 Glutathione synthetase low > 73
Escherichia coli ECRC99 0.82 KEDOAH_17065 yaaA peroxide stress protein YaaA 0.81 KEDOAH_08865 gshB glutathione synthase — —
Dickeya dianthicola 67-19 0.82 HGI48_RS18330 peroxide stress protein YaaA 0.91 HGI48_RS18495 glutathione synthase low > 71
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria 0.81 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) low > 76
Escherichia coli ECRC62 0.81 BNILDI_08185 yaaA peroxide stress protein YaaA 0.81 BNILDI_09725 gshB glutathione synthase low > 75
Escherichia coli ECOR27 0.81 NOLOHH_03420 yaaA peroxide stress protein YaaA 0.81 NOLOHH_11145 gshB glutathione synthase low > 75
Escherichia coli BW25113 0.81 b0006 yaaA hypothetical protein (NCBI) 0.81 b2947 gshB glutathione synthetase (NCBI) low > 76
Serratia liquefaciens MT49 0.80 IAI46_03045 peroxide stress protein YaaA 0.85 IAI46_21390 glutathione synthase low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS04260 peroxide stress protein YaaA 0.83 BWI76_RS24075 glutathione synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1081 UPF0246 protein YaaA 0.81 GFF3049 Glutathione synthetase (EC 6.3.2.3) low > 78
Pantoea sp. MT58 0.79 IAI47_16200 peroxide stress protein YaaA 0.78 IAI47_03615 glutathione synthase low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS02625 yaaA peroxide stress protein YaaA 0.82 LU632_RS05480 gshB glutathione synthase — —
Rahnella sp. WP5 0.76 EX31_RS03930 peroxide stress protein YaaA 0.86 EX31_RS02665 glutathione synthase low > 89
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11930 peroxide stress protein YaaA 0.77 CSW01_02490 glutathione synthetase low > 62
Marinobacter adhaerens HP15 0.69 HP15_1223 protein YaaA 0.63 HP15_3512 glutathione synthetase low > 73
Acinetobacter radioresistens SK82 0.68 MPMX26_02017 Peroxide stress resistance protein YaaA 0.54 MPMX26_02936 Glutathione synthetase low > 36
Pseudomonas putida KT2440 0.67 PP_1289 conserved protein of unknown function, DUF328 family 0.65 PP_4993 Glutathione synthetase low > 96
Pseudomonas sp. RS175 0.67 PFR28_03554 Peroxide stress resistance protein YaaA 0.64 PFR28_04232 Glutathione synthetase low > 88
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_04675 hypothetical protein 0.64 AO353_08110 glutathione synthetase low > 101
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17320 hypothetical protein 0.64 AO356_13475 glutathione synthetase low > 104
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_1686 UPF0246 protein YaaA 0.64 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) low > 87
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_5389 UPF0246 protein YaaA 0.64 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3) low > 103
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_981 UPF0246 protein YaaA 0.64 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3) low > 87
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1064 Protein of unknown function DUF328 0.68 Psyr_0487 glutathione synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1064 Protein of unknown function DUF328 0.68 Psyr_0487 glutathione synthase low > 86
Pseudomonas simiae WCS417 0.65 PS417_04850 hypothetical protein 0.64 PS417_26675 glutathione synthetase — —
Pseudomonas stutzeri RCH2 0.64 Psest_3173 Uncharacterized protein conserved in bacteria 0.61 Psest_0296 glutathione synthetase, prokaryotic low > 67
Shewanella loihica PV-4 0.64 Shew_1093 hypothetical protein (RefSeq) 0.70 Shew_3225 glutathione synthetase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.64 OH686_07085 UPF0246 protein YaaA 0.67 OH686_10915 glutathione synthase low > 80
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.64 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.64 PFLU_RS28320 glutathione synthase low > 109
Shewanella amazonensis SB2B 0.63 Sama_0917 hypothetical protein (RefSeq) 0.70 Sama_0574 glutathione synthetase (RefSeq) 0.31 10
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS14635 peroxide stress protein YaaA 0.46 ABZR87_RS06710 glutathione synthase low > 80
Alteromonas macleodii MIT1002 0.60 MIT1002_03077 hypothetical protein 0.60 MIT1002_03055 Glutathione synthetase low > 70
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14595 peroxide stress protein YaaA 0.47 RPSI07_RS22450 glutathione synthase low > 81
Ralstonia solanacearum UW163 0.59 UW163_RS11005 peroxide stress protein YaaA 0.48 UW163_RS02720 glutathione synthase — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02720 peroxide stress protein YaaA 0.48 RALBFv3_RS10860 glutathione synthase low > 76
Ralstonia solanacearum GMI1000 0.59 RS_RS10095 peroxide stress protein YaaA 0.48 RS_RS01700 glutathione synthetase low > 80
Paraburkholderia graminis OAS925 0.58 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) 0.47 ABIE53_000657 glutathione synthase low > 113
Shewanella sp. ANA-3 0.58 Shewana3_3143 hypothetical protein (RefSeq) 0.71 Shewana3_3445 glutathione synthetase (RefSeq) low > 73
Dechlorosoma suillum PS 0.58 Dsui_2322 hypothetical protein 0.46 Dsui_0746 glutathione synthetase low > 51
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04599 hypothetical protein 0.46 H281DRAFT_02010 glutathione synthase low > 103
Shewanella oneidensis MR-1 0.57 SO3540 conserved hypothetical protein (NCBI ptt file) 0.70 SO0831 gshB glutathione synthetase (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS06780 hypothetical protein 0.46 BPHYT_RS02560 glutathione synthetase low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS24000 peroxide stress protein YaaA 0.45 QEN71_RS01415 glutathione synthase low > 153
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS05780 hypothetical protein 0.46 RR42_RS01780 glutathione synthetase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF720 UPF0246 protein YaaA 0.47 GFF2650 Glutathione synthetase (EC 6.3.2.3) low > 90
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1593 UPF0246 protein YaaA 0.46 Ac3H11_711 Glutathione synthetase (EC 6.3.2.3) low > 79
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_03496 hypothetical protein 0.36 CCNA_00140 glutathione synthetase — —
Caulobacter crescentus NA1000 0.48 CCNA_03496 hypothetical protein 0.36 CCNA_00140 glutathione synthetase — —
Variovorax sp. SCN45 0.48 GFF6020 UPF0246 protein YaaA 0.46 GFF6322 Glutathione synthetase (EC 6.3.2.3) low > 127
Variovorax sp. OAS795 0.47 ABID97_RS07905 peroxide stress protein YaaA 0.47 ABID97_RS04630 glutathione synthase low > 91
Castellaniella sp019104865 MT123 0.47 ABCV34_RS01170 peroxide stress protein YaaA 0.44 ABCV34_RS04795 glutathione synthase low > 48
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS06085 peroxide stress protein YaaA 0.37 A4249_RS14140 glutathione synthase — —
Dinoroseobacter shibae DFL-12 0.43 Dshi_3333 protein of unknown function DUF328 (RefSeq) 0.34 Dshi_2829 glutathione synthetase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.43 PGA1_c31890 Uncharacterized protein conserved in bacteria 0.37 PGA1_c26710 glutathione synthetase GshB — —

Not shown: 7 genomes with orthologs for HER17_RS02810 only; 20 genomes with orthologs for HER17_RS02635 only