Conservation of cofitness between HEPCGN_25650 and HEPCGN_08820 in Escherichia coli ECOR38

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase 1.0 HEPCGN_08820 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.94 8
Escherichia coli ECRC99 1.00 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase 0.99 KEDOAH_17325 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Escherichia coli ECRC100 1.00 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase 0.99 OKFHMN_10830 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.87 14
Escherichia coli ECRC98 1.00 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase 0.99 JDDGAC_14425 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 86
Escherichia coli ECRC102 1.00 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase 0.99 NIAGMN_08680 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Escherichia coli ECRC101 1.00 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase 0.99 MCAODC_01345 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.88 7
Escherichia fergusonii Becca 1.00 EFB2_02644 Orotidine 5'-phosphate decarboxylase 0.99 EFB2_03991 4-hydroxythreonine-4-phosphate dehydrogenase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.99 OHPLBJKB_03604 4-hydroxythreonine-4-phosphate dehydrogenase low > 73
Escherichia coli ECOR27 0.99 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase 1.00 NOLOHH_03175 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.90 5
Escherichia coli ECRC62 0.99 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase 0.99 BNILDI_08430 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.95 8
Escherichia coli BW25113 0.91 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.99 b0052 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) low > 76
Escherichia coli BL21 0.88 ECD_01258 orotidine-5'-phosphate decarboxylase 0.99 ECD_00056 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent 0.60 28
Escherichia coli Nissle 1917 0.84 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase 0.99 ECOLIN_RS00290 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 0.92 GFF189 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) low > 78
Enterobacter sp. TBS_079 0.77 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.85 MPMX20_00748 4-hydroxythreonine-4-phosphate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.85 EX28DRAFT_3646 4-hydroxythreonine-4-phosphate dehydrogenase — —
Klebsiella michiganensis M5al 0.74 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.82 BWI76_RS04525 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 92
Rahnella sp. WP5 0.71 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.74 EX31_RS03775 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 89
Pantoea sp. MT58 0.70 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.76 IAI47_16080 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.67 73
Dickeya dianthicola 67-19 0.69 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.76 HGI48_RS18195 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 71
Pectobacterium carotovorum WPP14 0.68 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.74 HER17_RS02965 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.92 45
Dickeya dadantii 3937 0.68 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.76 DDA3937_RS18260 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.67 66
Dickeya dianthicola ME23 0.68 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.75 DZA65_RS19335 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 75
Erwinia amylovora T8 0.67 OLJFJH_13570 orotidine-5'-phosphate decarboxylase 0.77 OLJFJH_01365 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Serratia liquefaciens MT49 0.66 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.75 IAI46_03250 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 86
Erwinia tracheiphila SCR3 0.63 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.77 LU632_RS02725 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_09560 orotidine-5'-phosphate decarboxylase 0.62 CSW01_02330 4-hydroxythreonine-4-phosphate dehydrogenase — —
Shewanella amazonensis SB2B 0.58 Sama_1740 orotidine 5'-phosphate decarboxylase (RefSeq) 0.65 Sama_2818 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) — —
Shewanella sp. ANA-3 0.57 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.65 Shewana3_3208 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) — —
Shewanella loihica PV-4 0.57 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) 0.67 Shew_0880 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.64 SO3638 pdxA pyridoxal phosphate biosynthetic protein PdxA (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.55 HP15_1370 orotidine 5'-phosphate decarboxylase 0.55 HP15_3279 4-hydroxythreonine-4-phosphate dehydrogenase — —
Alteromonas macleodii MIT1002 0.54 MIT1002_02184 Orotidine 5'-phosphate decarboxylase 0.62 MIT1002_00782 4-hydroxythreonine-4-phosphate dehydrogenase — —
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.57 B158DRAFT_0789 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.59 PFLU_RS27460 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.59 PFLU_RS27460 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.60 PfGW456L13_1201 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_01670 orotidine 5'-phosphate decarboxylase 0.59 AO353_07310 4-hydroxythreonine-4-phosphate dehydrogenase — —
Methylophilus sp. DMC18 0.49 GFF737 Orotidine 5'-phosphate decarboxylase 0.53 GFF261 4-hydroxythreonine-4-phosphate dehydrogenase — —
Acinetobacter radioresistens SK82 0.49 MPMX26_01242 Orotidine 5'-phosphate decarboxylase 0.51 MPMX26_00595 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.49 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 0.59 Psest_3667 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas simiae WCS417 0.48 PS417_09055 orotidine 5'-phosphate decarboxylase 0.59 PS417_25805 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas aeruginosa PA14 0.48 IKLFDK_14615 orotidine-5'-phosphate decarboxylase 0.58 IKLFDK_22445 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas sp. BP01 0.48 JOY50_RS15880 pyrF orotidine-5'-phosphate decarboxylase 0.59 JOY50_RS18145 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas sp. S08-1 0.48 OH686_00580 Orotidine 5'-phosphate decarboxylase 0.56 OH686_15045 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.58 Pf6N2E2_4806 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Pseudomonas sp. RS175 0.47 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.57 PFR28_04063 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_19850 orotidine 5'-phosphate decarboxylase 0.58 AO356_14340 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.59 Pf1N1B4_2529 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Pseudomonas sp. DMC3 0.47 GFF4798 Orotidine 5'-phosphate decarboxylase 0.59 GFF36 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas sp. SVBP6 0.47 COO64_RS06575 pyrF orotidine-5'-phosphate decarboxylase 0.59 COO64_RS22505 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.56 Psyr_4626 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.56 Psyr_4626 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas putida KT2440 0.46 PP_1815 Orotidine 5'-phosphate decarboxylase 0.58 PP_0402 4-hydroxythreonine-4-phosphate dehydrogenase — —
Rhodospirillum rubrum S1H 0.34 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) 0.27 Rru_A0432 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) low > 58
Synechocystis sp000284455 PCC 6803 0.32 SGL_RS08270 orotidine-5'-phosphate decarboxylase 0.28 SGL_RS16360 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_0234 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.27 Ga0059261_0878 4-hydroxythreonine-4-phosphate dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_1137 orotidine 5'-phosphate decarboxylase (RefSeq) 0.27 DvMF_0837 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) low > 51
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_2569 pyrF orotidine 5'-phosphate decarboxylase 0.29 Synpcc7942_0804 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.30 AMB_RS20255 orotidine-5'-phosphate decarboxylase 0.31 AMB_RS18815 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Fusobacterium nucleatum SB010 0.28 HUW76_08730 orotidine-5'-phosphate decarboxylase 0.24 HUW76_01940 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 35
Rhodopseudomonas palustris CGA009 0.28 TX73_001750 orotidine-5'-phosphate decarboxylase 0.30 TX73_015855 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Sinorhizobium meliloti 1021 0.27 SMc00412 orotidine 5'-phosphate decarboxylase 0.32 SMc00580 4-hydroxythreonine-4-phosphate dehydrogenase low > 103
Rhizobium sp. OAE497 0.27 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase 0.32 ABIE40_RS06395 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Agrobacterium fabrum C58 0.26 Atu0298 orotidine 5 0.34 Atu1104 pyridoxal phosphate biosynthesis protein — —
Bosea sp. OAE506 0.25 ABIE41_RS00050 orotidine-5'-phosphate decarboxylase 0.30 ABIE41_RS20430 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 77
Xanthobacter sp. DMC5 0.23 GFF2226 Orotidine 5'-phosphate decarboxylase 0.31 GFF4144 4-hydroxythreonine-4-phosphate dehydrogenase — —
Caulobacter crescentus NA1000 0.23 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.31 CCNA_01758 4-hydroxythreonine-4-phosphate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.31 CCNA_01758 4-hydroxythreonine-4-phosphate dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS14665 orotidine-5'-phosphate decarboxylase 0.29 A4249_RS06755 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.41 Xcc-8004.4270.1 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Phaeobacter inhibens DSM 17395 0.19 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF 0.31 PGA1_c19850 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Dinoroseobacter shibae DFL-12 0.16 Dshi_0615 orotidine 5'-phosphate decarboxylase (RefSeq) 0.36 Dshi_1186 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) — —

Not shown: 1 genomes with orthologs for HEPCGN_25650 only; 34 genomes with orthologs for HEPCGN_08820 only