Conservation of cofitness between GFF2649 and GFF768 in Hydrogenophaga sp. GW460-11-11-14-LB1

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF2649 Benzoate transport protein 1.0 GFF768 Peptide chain release factor 3 0.67 5
Variovorax sp. SCN45 0.73 GFF6323 Benzoate transport protein 0.63 GFF2045 Peptide chain release factor 3 low > 127
Acidovorax sp. GW101-3H11 0.72 Ac3H11_710 Benzoate transport protein 0.63 Ac3H11_3041 Peptide chain release factor 3 — —
Lysobacter sp. OAE881 0.55 ABIE51_RS02455 benzoate/H(+) symporter BenE family transporter 0.53 ABIE51_RS16210 peptide chain release factor 3 — —
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.5286.1 Benzoate transport protein 0.51 Xcc-8004.1590.1 Peptide chain release factor 3 — —
Paraburkholderia graminis OAS925 0.49 ABIE53_001417 benzoate membrane transport protein 0.68 ABIE53_004717 peptide chain release factor 3 low > 113
Pseudomonas putida KT2440 0.48 PP_1820 Benzoate transport protein 0.52 PP_0872 Peptide chain release factor 3 low > 96
Castellaniella sp019104865 MT123 0.47 ABCV34_RS02900 benzoate/H(+) symporter BenE family transporter 0.72 ABCV34_RS12505 peptide chain release factor 3 low > 48
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_1839 Benzoate membrane transport protein 0.53 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) — —
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_1839 Benzoate membrane transport protein 0.53 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) — —
Shewanella sp. ANA-3 0.46 Shewana3_0320 benzoate transporter (RefSeq) 0.50 Shewana3_1037 prfC peptide chain release factor 3 (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00287 benzoate membrane transport protein 0.67 H281DRAFT_03538 bacterial peptide chain release factor 3 (bRF-3) low > 103
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS06050 membrane protein 0.68 BPHYT_RS34275 peptide chain release factor 3 low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter 0.54 PFLU_RS04070 peptide chain release factor 3 low > 109
Pseudomonas simiae WCS417 0.46 PS417_20910 membrane protein 0.53 PS417_04030 peptide chain release factor 3 — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter 0.54 PFLU_RS04070 peptide chain release factor 3 low > 109
Pseudomonas sp. RS175 0.46 PFR28_01059 Inner membrane protein YdcO 0.54 PFR28_00118 Peptide chain release factor RF3 — —
Phaeobacter inhibens DSM 17395 0.46 PGA1_c29480 putative inner membrane transport protein 0.47 PGA1_c10620 peptide chain release factor 3 — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_2341 Benzoate transport protein 0.54 Pf6N2E2_3327 Peptide chain release factor 3 — —
Pseudomonas sp. S08-1 0.46 OH686_00595 Benzoate transport protein 0.53 OH686_08765 peptide chain release factor 3 — —
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_00755 hypothetical protein 0.54 AO353_05420 peptide chain release factor 3 low > 101
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4089 Benzoate transport protein 0.53 PfGW456L13_5060 Peptide chain release factor 3 low > 87
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_02585 hypothetical protein 0.54 AO356_07285 peptide chain release factor 3 — —
Escherichia coli ECOR27 0.45 NOLOHH_19285 ydcO BenE family transporter YdcO 0.52 NOLOHH_03600 prfC peptide chain release factor 3 low > 75
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3848 Benzoate transport protein 0.48 Pf1N1B4_1130 Peptide chain release factor 3 — —
Escherichia coli ECRC98 0.45 JDDGAC_04100 ydcO BenE family transporter YdcO 0.52 JDDGAC_14875 prfC peptide chain release factor 3 low > 86
Escherichia coli ECRC100 0.45 OKFHMN_01610 ydcO BenE family transporter YdcO 0.52 OKFHMN_11280 prfC peptide chain release factor 3 low > 80
Escherichia coli ECRC99 0.45 KEDOAH_26830 ydcO BenE family transporter YdcO 0.52 KEDOAH_16865 prfC peptide chain release factor 3 — —
Escherichia coli BW25113 0.45 b1433 b1433 putative membrane transport protein (VIMSS) 0.52 b4375 prfC peptide chain release factor 3 (NCBI) low > 76
Escherichia coli ECRC102 0.45 NIAGMN_25745 ydcO BenE family transporter YdcO 0.52 NIAGMN_09130 prfC peptide chain release factor 3 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02282 Inner membrane protein YdcO 0.52 OHPLBJKB_03687 Peptide chain release factor RF3 low > 73
Escherichia coli BL21 0.45 ECD_01391 BenE family inner membrane putative transporter 0.52 ECD_04250 peptide chain release factor RF-3 low > 61
Escherichia coli Nissle 1917 0.45 ECOLIN_RS08270 BenE family transporter YdcO 0.52 ECOLIN_RS25110 peptide chain release factor 3 — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS21705 benzoate/H(+) symporter BenE family transporter 0.52 HER17_RS19065 peptide chain release factor 3 low > 75
Escherichia fergusonii Becca 0.45 EFB2_02549 Inner membrane protein YdcO 0.52 EFB2_04072 Peptide chain release factor RF3 low > 86
Escherichia coli ECOR38 0.45 HEPCGN_26210 ydcO BenE family transporter YdcO 0.52 HEPCGN_09285 prfC peptide chain release factor 3 low > 87
Escherichia coli ECRC62 0.44 BNILDI_17735 ydcO BenE family transporter YdcO 0.52 BNILDI_08000 prfC peptide chain release factor 3 low > 75
Pseudomonas stutzeri RCH2 0.44 Psest_1717 benzoate transporter 0.53 Psest_3351 peptide chain release factor 3 low > 67
Acinetobacter radioresistens SK82 0.43 MPMX26_01755 Inner membrane protein YdcO 0.50 MPMX26_00476 Peptide chain release factor RF3 low > 36
Serratia liquefaciens MT49 0.42 IAI46_11435 benzoate/H(+) symporter BenE family transporter 0.52 IAI46_02875 peptide chain release factor 3 low > 86
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS24590 benzoate/H(+) symporter BenE family transporter 0.68 QEN71_RS17200 peptide chain release factor 3 low > 153
Rahnella sp. WP5 0.42 EX31_RS05715 benzoate/H(+) symporter BenE family transporter 0.52 EX31_RS04095 peptide chain release factor 3 — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS14695 membrane protein 0.57 RR42_RS37475 peptide chain release factor 3 low > 128
Desulfovibrio vulgaris Miyazaki F 0.41 DvMF_2241 benzoate transporter (RefSeq) 0.52 DvMF_2372 prfC peptide chain release factor 3 (RefSeq) low > 51
Pantoea sp. MT58 0.39 IAI47_10270 benzoate/H(+) symporter BenE family transporter 0.52 IAI47_03375 peptide chain release factor 3 low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF2596 Benzoate transport protein 0.52 GFF1035 Peptide chain release factor 3 low > 78
Enterobacter sp. TBS_079 0.38 MPMX20_02242 Inner membrane protein YdcO 0.52 MPMX20_00673 Peptide chain release factor RF3 low > 85
Azospirillum sp. SherDot2 0.38 MPMX19_03070 Inner membrane protein YdcO 0.48 MPMX19_01192 Peptide chain release factor 3 — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS19910 benzoate transporter 0.51 AZOBR_RS14730 peptide chain release factor 3 — —
Klebsiella michiganensis M5al 0.37 BWI76_RS13360 benzoate transporter 0.52 BWI76_RS04100 peptide chain release factor 3 low > 92
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1224 benzoate transporter 0.52 EX28DRAFT_3583 peptide chain release factor 3 low > 76
Rhodospirillum rubrum S1H 0.37 Rru_A1144 Benzoate membrane transport protein (NCBI) 0.50 Rru_A2497 Peptide chain release factor 3 (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.36 TX73_014490 benzoate/H(+) symporter BenE family transporter 0.45 TX73_011820 peptide chain release factor 3 low > 86
Dechlorosoma suillum PS 0.36 Dsui_2253 benzoate transporter 0.59 Dsui_2418 peptide chain release factor 3 — —
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_09835 benzoate transporter 0.52 CSW01_03470 peptide chain release factor 3 low > 62
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS06580 benzoate transporter 0.61 HSERO_RS14640 peptide chain release factor 3 low > 78
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS14875 benzoate/H(+) symporter BenE family transporter 0.43 A4249_RS15275 peptide chain release factor 3 low > 48
Rhizobium sp. OAE497 0.33 ABIE40_RS13335 benzoate/H(+) symporter BenE family transporter 0.46 ABIE40_RS01450 peptide chain release factor 3 low > 107
Agrobacterium fabrum C58 0.31 Atu2265 benzoate transport protein 0.45 Atu0315 peptide chain release factor 3 — —
Alteromonas macleodii MIT1002 0.31 MIT1002_00747 Inner membrane protein YdcO 0.51 MIT1002_01192 Peptide chain release factor 3 low > 70
Sinorhizobium meliloti 1021 0.30 SMc02691 membrane transporter 0.46 SMc00427 peptide chain release factor RF-3 protein low > 103
Bosea sp. OAE506 0.25 ABIE41_RS09390 benzoate/H(+) symporter BenE family transporter 0.45 ABIE41_RS06180 peptide chain release factor 3 low > 77
Marinobacter adhaerens HP15 0.15 HP15_1094 benzoate membrane transport protein 0.52 HP15_541 peptide chain release factor 3 low > 73

Not shown: 1 genomes with orthologs for GFF2649 only; 32 genomes with orthologs for GFF768 only