| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3761 | | Transcription elongation factor | 1.0 | Psest_0692 | | rRNA methylase, putative, group 3 | 0.21 | 15 |
| Pseudomonas sp. S08-1 | 0.75 | OH686_13825 | | Regulator of nucleoside diphosphate kinase | 0.84 | OH686_15915 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase | low | > 80 |
| Pseudomonas putida KT2440 | 0.68 | PP_5223 | | regulator of nucleotide diphosphokinase | 0.83 | PP_4879 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_0178 | | regulator of nucleoside diphosphate kinase | 0.89 | Psyr_0580 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_0178 | | regulator of nucleoside diphosphate kinase | 0.89 | Psyr_0580 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.65 | AO356_12755 | | nucleoside diphosphate kinase regulator | 0.89 | AO356_08605 | | 23S rRNA methyltransferase | low | > 104 |
| Pseudomonas sp. RS175 | 0.65 | PFR28_04372 | | Regulator of nucleoside diphosphate kinase | 0.89 | PFR28_05131 | | '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.63 | AO353_09025 | | nucleoside diphosphate kinase regulator | 0.89 | AO353_13205 | | 23S rRNA methyltransferase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.63 | PS417_27565 | | nucleoside diphosphate kinase regulator | 0.88 | PS417_02560 | | 23S rRNA methyltransferase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_849 | | Regulator of nucleoside diphosphate kinase | 0.89 | PfGW456L13_143 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_2178 | | Regulator of nucleoside diphosphate kinase | 0.87 | Pf1N1B4_1402 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_4424 | | Regulator of nucleoside diphosphate kinase | 0.88 | Pf6N2E2_3606 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS29245 | | nucleoside diphosphate kinase regulator | 0.88 | PFLU_RS02630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS29245 | | nucleoside diphosphate kinase regulator | 0.88 | PFLU_RS02630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 109 |
| Shewanella oneidensis MR-1 | 0.49 | SO1935 | rnk | regulator of nucleoside diphosphate kinase (NCBI ptt file) | 0.57 | SO3934 | | RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) | low | > 76 |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS07025 | | nucleoside diphosphate kinase regulator | 0.46 | ABIE51_RS07480 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.49 | LRK54_RS17435 | | nucleoside diphosphate kinase regulator | 0.45 | LRK54_RS00490 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.49 | LRK55_RS17655 | | nucleoside diphosphate kinase regulator | 0.45 | LRK55_RS00230 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 63 |
| Shewanella sp. ANA-3 | 0.48 | Shewana3_1714 | | GreA/GreB family elongation factor (RefSeq) | 0.57 | Shewana3_0698 | | 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.47 | Sama_1433 | | GreA/GreB family elongation factor (RefSeq) | 0.58 | Sama_3066 | | 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.46 | Xcc-8004.4225.1 | | Regulator of nucleoside diphosphate kinase | 0.47 | Xcc-8004.3368.1 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_07510 | rnk | nucleoside diphosphate kinase regulator | 0.44 | OKGIIK_06760 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 52 |
| Acinetobacter radioresistens SK82 | 0.42 | MPMX26_02046 | | Regulator of nucleoside diphosphate kinase | 0.44 | MPMX26_00241 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 36 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_3182 | | Regulator of nucleoside diphosphate kinase | 0.47 | Ac3H11_4141 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | — | — |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_01276 | | Regulator of nucleoside diphosphate kinase | 0.57 | MPMX20_00461 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.40 | GFF4522 | | Regulator of nucleoside diphosphate kinase | 0.56 | GFF833 | | '23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)' transl_table=11 | low | > 78 |
| Enterobacter asburiae PDN3 | 0.40 | EX28DRAFT_2346 | | Transcription elongation factor | 0.57 | EX28DRAFT_3377 | | rRNA methylase, putative, group 3 | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_17255 | | nucleoside diphosphate kinase regulator | 0.56 | CSW01_13150 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 62 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_03095 | | Regulator of nucleoside diphosphate kinase | 0.57 | OHPLBJKB_03862 | | '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 | low | > 73 |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS03335 | | nucleoside diphosphate kinase regulator | 0.57 | ECOLIN_RS24270 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia fergusonii Becca | 0.39 | EFB2_03482 | | Regulator of nucleoside diphosphate kinase | 0.57 | EFB2_04355 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 86 |
| Escherichia coli ECRC101 | 0.39 | MCAODC_26700 | rnk | nucleoside diphosphate kinase regulator | 0.57 | MCAODC_02730 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS07955 | | nucleoside diphosphate kinase regulator | 0.56 | BWI76_RS02580 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase | low | > 92 |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_23860 | rnk | nucleoside diphosphate kinase regulator | 0.57 | NOLOHH_04480 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli BW25113 | 0.39 | b0610 | rnk | nucleoside diphosphate kinase regulator (NCBI) | 0.57 | b4180 | rlmB | 23S rRNA (Gm2251)-methyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_00790 | rnk | nucleoside diphosphate kinase regulator | 0.57 | HEPCGN_10445 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli ECRC101 | 0.39 | OKFHMN_07485 | rnk | nucleoside diphosphate kinase regulator | 0.57 | OKFHMN_12215 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli ECRC102 | 0.39 | NIAGMN_05540 | rnk | nucleoside diphosphate kinase regulator | 0.57 | NIAGMN_10065 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli ECRC99 | 0.39 | KEDOAH_20485 | rnk | nucleoside diphosphate kinase regulator | 0.57 | KEDOAH_15940 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli BL21 | 0.39 | ECD_00578 | | regulator of nucleoside diphosphate kinase | 0.57 | ECD_04047 | | 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent | — | — |
| Escherichia coli ECRC62 | 0.39 | BNILDI_21870 | rnk | nucleoside diphosphate kinase regulator | 0.57 | BNILDI_07010 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli ECRC98 | 0.39 | JDDGAC_11130 | rnk | nucleoside diphosphate kinase regulator | 0.57 | JDDGAC_15855 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Dickeya dianthicola ME23 | 0.38 | DZA65_RS01485 | | nucleoside diphosphate kinase regulator | 0.56 | DZA65_RS18400 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 75 |
| Dickeya dianthicola 67-19 | 0.38 | HGI48_RS01420 | | nucleoside diphosphate kinase regulator | 0.57 | HGI48_RS17310 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Dickeya dadantii 3937 | 0.37 | DDA3937_RS01505 | | nucleoside diphosphate kinase regulator | 0.57 | DDA3937_RS17255 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.36 | HER17_RS20085 | | nucleoside diphosphate kinase regulator | 0.58 | HER17_RS03840 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 75 |
| Serratia liquefaciens MT49 | 0.36 | IAI46_22555 | | nucleoside diphosphate kinase regulator | 0.57 | IAI46_01665 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 86 |
| Rahnella sp. WP5 | 0.35 | EX31_RS12330 | | nucleoside diphosphate kinase regulator | 0.56 | EX31_RS08780 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 89 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.34 | CA264_08435 | | transcription elongation factor GreAB | 0.25 | CA264_20095 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 74 |
| Ralstonia sp. UNC404CL21Col | 0.34 | ABZR87_RS00985 | | nucleoside diphosphate kinase regulator | 0.54 | ABZR87_RS10990 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS19895 | | elongation factor GreAB | 0.51 | RR42_RS13060 | | 23S rRNA methyltransferase | low | > 128 |
| Rhodopseudomonas palustris CGA009 | 0.33 | TX73_004465 | | nucleoside diphosphate kinase regulator | 0.27 | TX73_017390 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.33 | Dshi_0557 | | GreA/GreB family elongation factor (RefSeq) | 0.25 | Dshi_2571 | | RNA methyltransferase, TrmH family, group 3 (RefSeq) | low | > 64 |
| Ralstonia solanacearum PSI07 | 0.32 | RPSI07_RS11955 | | nucleoside diphosphate kinase regulator | 0.54 | RPSI07_RS18025 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.32 | H281DRAFT_00397 | | GreA/GreB family elongation factor | 0.50 | H281DRAFT_00713 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.32 | BPHYT_RS13215 | | elongation factor GreAB | 0.51 | BPHYT_RS08460 | | 23S rRNA (guanosine-2'-O-)-methyltransferase | — | — |
| Variovorax sp. OAS795 | 0.31 | ABID97_RS29100 | | GreA/GreB family elongation factor | 0.47 | ABID97_RS14320 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.30 | GFF3632 | | Regulator of nucleoside diphosphate kinase | 0.47 | GFF4838 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 90 |
| Ralstonia solanacearum GMI1000 | 0.30 | RS_RS13210 | | nucleoside diphosphate kinase regulator | 0.55 | RS_RS06160 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.29 | RALBFv3_RS05345 | | elongation factor GreAB | 0.55 | RALBFv3_RS15350 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Ralstonia solanacearum UW163 | 0.29 | UW163_RS08280 | | elongation factor GreAB | 0.55 | UW163_RS12815 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Variovorax sp. SCN45 | 0.28 | GFF1183 | | Regulator of nucleoside diphosphate kinase | 0.47 | GFF1018 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.25 | Ga0059261_3606 | | Transcription elongation factor | 0.25 | Ga0059261_1814 | | rRNA methylase, putative, group 3 | low | > 68 |
| Azospirillum brasilense Sp245 | 0.23 | AZOBR_RS06945 | | GreA/GreB family elongation factor | 0.32 | AZOBR_RS11565 | | ribosomal large subunit pseudouridine synthase | low | > 97 |
| Alteromonas macleodii MIT1002 | 0.23 | MIT1002_03243 | | Regulator of nucleoside diphosphate kinase | 0.61 | MIT1002_03605 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 70 |
| Dechlorosoma suillum PS | 0.22 | Dsui_0102 | | transcription elongation factor | 0.45 | Dsui_1899 | | rRNA methylase, putative, group 3 | low | > 51 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.22 | Echvi_4262 | | Transcription elongation factor | 0.28 | Echvi_2186 | | rRNA methylase, putative, group 3 | — | — |
Not shown: 3 genomes with orthologs for Psest_3761 only; 20 genomes with orthologs for Psest_0692 only