Conservation of cofitness between PS417_00900 and PS417_27480 in Pseudomonas simiae WCS417

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00900 4-aminobutyrate aminotransferase 1.0 PS417_27480 ABC transporter ATP-binding protein 0.19 19
Pseudomonas fluorescens SBW25 1.00 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 1.00 PFLU_RS29160 ATP-binding cassette domain-containing protein 0.60 14
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 1.00 PFLU_RS29160 ATP-binding cassette domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.87 Pf1N1B4_2194 Glutathione-regulated potassium-efflux system ATP-binding protein 0.21 59
Pseudomonas sp. RS175 0.95 PFR28_04756 5-aminovalerate aminotransferase DavT 0.87 PFR28_04357 putative ABC transporter ATP-binding protein YheS low > 88
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.87 PfGW456L13_865 Glutathione-regulated potassium-efflux system ATP-binding protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.87 AO353_08945 ABC transporter ATP-binding protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_10715 4-aminobutyrate aminotransferase 0.88 AO356_12830 ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.87 Pf6N2E2_4439 Glutathione-regulated potassium-efflux system ATP-binding protein low > 103
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.88 Psyr_0052 ABC transporter low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.88 Psyr_0052 ABC transporter low > 86
Pseudomonas putida KT2440 0.87 PP_0214 4-aminobutyrate aminotransferase 0.81 PP_0196 putative of ABC superfamily informational factor: ATP-binding components low > 96
Pseudomonas stutzeri RCH2 0.86 Psest_3653 4-aminobutyrate aminotransferase, prokaryotic type 0.79 Psest_3740 ATPase components of ABC transporters with duplicated ATPase domains low > 67
Pseudomonas sp. S08-1 0.80 OH686_11880 4-aminobutyrate transaminase 0.76 OH686_13945 Bis-ABC ATPase YheS low > 80
Escherichia coli ECRC102 0.76 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.54 NIAGMN_15035 yheS ABC transporter ATP-binding protein — —
Escherichia coli ECRC99 0.76 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.54 KEDOAH_10875 yheS ABC transporter ATP-binding protein — —
Escherichia coli ECRC98 0.76 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.54 JDDGAC_20895 yheS ABC transporter ATP-binding protein — —
Escherichia coli ECRC101 0.76 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.54 OKFHMN_17265 yheS ABC transporter ATP-binding protein — —
Escherichia coli ECRC101 0.76 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.54 MCAODC_07795 yheS ABC transporter ATP-binding protein — —
Escherichia coli BL21 0.76 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 0.54 ECD_03203 ABC-F family protein predicted regulatory ATPase low > 60
Escherichia fergusonii Becca 0.76 EFB2_01268 4-aminobutyrate aminotransferase GabT 0.54 EFB2_00470 putative ABC transporter ATP-binding protein YheS low > 86
Escherichia coli BW25113 0.76 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) 0.54 b3352 yheS fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) low > 76
Escherichia coli ECOR38 0.76 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.54 HEPCGN_16090 yheS ABC transporter ATP-binding protein low > 85
Escherichia coli ECOR27 0.76 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.54 NOLOHH_09065 yheS ABC transporter ATP-binding protein low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 0.54 OHPLBJKB_00350 putative ABC transporter ATP-binding protein YheS 0.57 35
Escherichia coli Nissle 1917 0.76 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase 0.54 ECOLIN_RS19200 ABC transporter ATP-binding protein low > 52
Escherichia coli ECRC62 0.75 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.54 BNILDI_02455 yheS ABC transporter ATP-binding protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.54 GFF3719 Glutathione-regulated potassium-efflux system ATP-binding protein low > 78
Shewanella amazonensis SB2B 0.70 Sama_2636 gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) 0.52 Sama_2996 ABC transporter, ATP-binding protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.68 Shewana3_3091 4-aminobutyrate aminotransferase (RefSeq) 0.52 Shewana3_3393 ABC transporter related (RefSeq) low > 73
Variovorax sp. OAS795 0.68 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.40 ABID97_RS16655 ATP-binding cassette domain-containing protein low > 91
Shewanella oneidensis MR-1 0.67 SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) 0.52 SO0885 ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.66 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.42 Ac3H11_2300 Glutathione-regulated potassium-efflux system ATP-binding protein low > 79
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS26240 4-aminobutyrate aminotransferase 0.50 RR42_RS12010 ABC transporter 0.35 27
Azospirillum sp. SherDot2 0.58 MPMX19_04919 5-aminovalerate aminotransferase DavT 0.38 MPMX19_01459 putative ABC transporter ATP-binding protein YheS low > 112
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS05420 4-aminobutyrate aminotransferase 0.53 HSERO_RS10780 glutathione ABC transporter ATP-binding protein low > 78
Pectobacterium carotovorum WPP14 0.56 HER17_RS09880 4-aminobutyrate--2-oxoglutarate transaminase 0.54 HER17_RS01945 ABC transporter ATP-binding protein low > 75
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS19980 4-aminobutyrate--2-oxoglutarate transaminase 0.50 QEN71_RS06335 ATP-binding cassette domain-containing protein low > 153
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS05190 4-aminobutyrate--2-oxoglutarate transaminase 0.49 ABZR87_RS11690 ATP-binding cassette domain-containing protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_03179 4-aminobutyrate aminotransferase apoenzyme 0.50 H281DRAFT_00593 ATP-binding cassette, subfamily F, member 3 low > 103
Acinetobacter radioresistens SK82 0.55 MPMX26_01998 4-aminobutyrate aminotransferase PuuE 0.53 MPMX26_00007 putative ABC transporter ATP-binding protein YheS low > 36
Enterobacter sp. TBS_079 0.55 MPMX20_04337 4-aminobutyrate aminotransferase PuuE 0.54 MPMX20_04246 putative ABC transporter ATP-binding protein YheS low > 85
Ralstonia solanacearum PSI07 0.55 RPSI07_RS23805 4-aminobutyrate--2-oxoglutarate transaminase 0.48 RPSI07_RS17255 ABC transporter low > 81
Enterobacter asburiae PDN3 0.55 EX28DRAFT_4294 4-aminobutyrate aminotransferase, prokaryotic type 0.54 EX28DRAFT_4177 ATPase components of ABC transporters with duplicated ATPase domains low > 76
Variovorax sp. SCN45 0.55 GFF921 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.38 GFF259 Bis-ABC ATPase YheS low > 127
Serratia liquefaciens MT49 0.55 IAI46_22165 4-aminobutyrate--2-oxoglutarate transaminase 0.53 IAI46_23525 ABC transporter ATP-binding protein low > 86
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS22435 4-aminobutyrate aminotransferase 0.49 BPHYT_RS12220 glutathione ABC transporter ATP-binding protein 0.18 79
Klebsiella michiganensis M5al 0.54 BWI76_RS26375 aspartate aminotransferase family protein 0.54 BWI76_RS25945 ABC transporter ATP-binding protein 0.21 17
Dickeya dianthicola ME23 0.54 DZA65_RS12405 4-aminobutyrate--2-oxoglutarate transaminase 0.49 DZA65_RS20625 ABC transporter ATP-binding protein low > 75
Sinorhizobium meliloti 1021 0.54 SM_b21186 4-aminobutyrate aminotransferase 0.36 SMc00590 ABC transporter ATP-binding protein low > 103
Ralstonia solanacearum GMI1000 0.54 RS_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.49 RS_RS06900 ABC transporter low > 80
Paraburkholderia graminis OAS925 0.54 ABIE53_004117 4-aminobutyrate aminotransferase 0.49 ABIE53_002523 ATP-binding cassette subfamily F protein 3 low > 113
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS09545 4-aminobutyrate--2-oxoglutarate transaminase 0.49 RALBFv3_RS00225 glutathione ABC transporter ATP-binding protein low > 76
Ralstonia solanacearum UW163 0.53 UW163_RS04035 4-aminobutyrate--2-oxoglutarate transaminase 0.49 UW163_RS13555 glutathione ABC transporter ATP-binding protein — —
Dickeya dianthicola 67-19 0.53 HGI48_RS11860 4-aminobutyrate--2-oxoglutarate transaminase 0.49 HGI48_RS19535 ABC transporter ATP-binding protein low > 71
Dickeya dadantii 3937 0.53 DDA3937_RS11830 4-aminobutyrate--2-oxoglutarate transaminase 0.51 DDA3937_RS19415 ABC transporter ATP-binding protein low > 74
Rhizobium sp. OAE497 0.53 ABIE40_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.36 ABIE40_RS06450 ABC-F family ATP-binding cassette domain-containing protein low > 107
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF2029 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.39 GFF4548 Glutathione-regulated potassium-efflux system ATP-binding protein low > 90
Pantoea sp. MT58 0.52 IAI47_19475 4-aminobutyrate--2-oxoglutarate transaminase 0.54 IAI47_02020 ABC transporter ATP-binding protein low > 76
Castellaniella sp019104865 MT123 0.52 ABCV34_RS01765 4-aminobutyrate--2-oxoglutarate transaminase 0.45 ABCV34_RS05180 ATP-binding cassette domain-containing protein low > 48
Shewanella loihica PV-4 0.52 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) 0.51 Shew_0593 ABC transporter-related protein (RefSeq) low > 60
Rhodopseudomonas palustris CGA009 0.52 TX73_012015 4-aminobutyrate--2-oxoglutarate transaminase 0.33 TX73_015815 ABC-F family ATP-binding cassette domain-containing protein low > 86
Rahnella sp. WP5 0.51 EX31_RS00095 4-aminobutyrate--2-oxoglutarate transaminase 0.54 EX31_RS04505 ABC transporter ATP-binding protein low > 89
Marinobacter adhaerens HP15 0.50 HP15_3708 4-aminobutyrate aminotransferase 0.55 HP15_226 ABC transporter ATP-binding protein-like protein low > 73
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS04500 acetyl ornithine aminotransferase family protein 0.41 LRK54_RS00325 ATP-binding cassette domain-containing protein low > 59
Lysobacter sp. OAE881 0.25 ABIE51_RS02780 aspartate aminotransferase family protein 0.40 ABIE51_RS05000 ABC-F family ATP-binding cassette domain-containing protein low > 62

Not shown: 2 genomes with orthologs for PS417_00900 only; 25 genomes with orthologs for PS417_27480 only