Conservation of cofitness between PS417_00165 and PS417_26730 in Pseudomonas simiae WCS417

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00165 galactonate dehydratase 1.0 PS417_26730 pyrroline-5-carboxylate reductase 0.14 16
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS00160 galactonate dehydratase 0.95 PFLU_RS28375 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens SBW25 0.99 PFLU_RS00160 galactonate dehydratase 0.95 PFLU_RS28375 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens FW300-N1B4 0.99 Pf1N1B4_398 Galactonate dehydratase (EC 4.2.1.6) 0.89 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_20290 galactonate dehydratase 0.86 AO356_13420 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens FW300-N2E2 0.99 Pf6N2E2_5977 Galactonate dehydratase (EC 4.2.1.6) 0.85 Pf6N2E2_4600 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Pseudomonas sp. RS175 0.98 PFR28_02985 D-galactonate dehydratase 0.86 PFR28_04243 Pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2128 Galactonate dehydratase (EC 4.2.1.6) 0.88 PfGW456L13_1010 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.97 Psyr_1989 galactonate dehydratase 0.76 Psyr_0476 pyrroline-5-carboxylate reductase low > 86
Pseudomonas syringae pv. syringae B728a 0.97 Psyr_1989 galactonate dehydratase 0.76 Psyr_0476 pyrroline-5-carboxylate reductase — —
Herbaspirillum seropedicae SmR1 0.86 HSERO_RS05150 galactonate dehydratase 0.38 HSERO_RS18990 pyrroline-5-carboxylate reductase low > 78
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS02295 galactonate dehydratase 0.41 QEN71_RS26600 pyrroline-5-carboxylate reductase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_04215 galactonate dehydratase 0.41 H281DRAFT_04679 pyrroline-5-carboxylate reductase low > 103
Dyella japonica UNC79MFTsu3.2 0.81 ABZR86_RS01215 galactonate dehydratase 0.42 ABZR86_RS10425 pyrroline-5-carboxylate reductase low > 74
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS16405 galactonate dehydratase [EC: 4.2.1.6] (from data) 0.40 BPHYT_RS03490 pyrroline-5-carboxylate reductase — —
Paraburkholderia graminis OAS925 0.81 ABIE53_003454 galactonate dehydratase 0.42 ABIE53_000840 pyrroline-5-carboxylate reductase low > 113
Rhodanobacter sp. FW510-T8 0.81 OKGIIK_12510 dgoD galactonate dehydratase 0.42 OKGIIK_11135 proC pyrroline-5-carboxylate reductase low > 52
Acidovorax sp. GW101-3H11 0.81 Ac3H11_600 Galactonate dehydratase (EC 4.2.1.6) 0.39 Ac3H11_788 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Rhizobium sp. OAE497 0.80 ABIE40_RS17095 galactonate dehydratase 0.36 ABIE40_RS13005 pyrroline-5-carboxylate reductase low > 107
Lysobacter sp. OAE881 0.80 ABIE51_RS10935 galactonate dehydratase 0.48 ABIE51_RS16065 pyrroline-5-carboxylate reductase 0.68 18
Sinorhizobium meliloti 1021 0.79 SM_b20510 galactonate dehydratase 0.32 SMc02677 pyrroline-5-carboxylate reductase low > 103
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS01445 galactonate dehydratase 0.38 ABZR87_RS01230 pyrroline-5-carboxylate reductase — —
Pantoea sp. MT58 0.63 IAI47_00045 galactonate dehydratase 0.26 IAI47_14945 pyrroline-5-carboxylate reductase low > 76
Rahnella sp. WP5 0.63 EX31_RS10320 galactonate dehydratase 0.37 EX31_RS02690 pyrroline-5-carboxylate reductase low > 89
Ralstonia solanacearum PSI07 0.63 RPSI07_RS11425 galactonate dehydratase 0.38 RPSI07_RS11720 pyrroline-5-carboxylate reductase low > 81
Ralstonia solanacearum GMI1000 0.63 RS_RS13765 D-galactonate dehydratase 0.38 RS_RS13440 pyrroline-5-carboxylate reductase — —
Dickeya dianthicola 67-19 0.62 HGI48_RS06940 galactonate dehydratase 0.37 HGI48_RS17350 pyrroline-5-carboxylate reductase — —
Escherichia fergusonii Becca 0.62 EFB2_00011 D-galactonate dehydratase 0.27 EFB2_03670 Pyrroline-5-carboxylate reductase low > 86
Dickeya dianthicola ME23 0.62 DZA65_RS07285 galactonate dehydratase 0.37 DZA65_RS18440 pyrroline-5-carboxylate reductase — —
Escherichia coli ECOR38 0.62 HEPCGN_13775 dgoD galactonate dehydratase 0.27 HEPCGN_07250 proC pyrroline-5-carboxylate reductase low > 85
Escherichia coli Nissle 1917 0.62 ECOLIN_RS21265 galactonate dehydratase 0.27 ECOLIN_RS02345 pyrroline-5-carboxylate reductase low > 52
Escherichia coli BW25113 0.62 b4478 dgoD galactonate dehydratase (NCBI) 0.27 b0386 proC pyrroline-5-carboxylate reductase (NCBI) low > 76
Escherichia coli ECRC62 0.62 BNILDI_04320 dgoD galactonate dehydratase 0.27 BNILDI_22950 proC pyrroline-5-carboxylate reductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_00011 D-galactonate dehydratase 0.27 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase low > 73
Escherichia coli ECOR27 0.62 NOLOHH_07210 dgoD galactonate dehydratase 0.27 NOLOHH_01535 proC pyrroline-5-carboxylate reductase low > 57
Escherichia coli BL21 0.62 ECD_03575 D-galactonate dehydratase 0.27 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1765 Galactonate dehydratase (EC 4.2.1.6) 0.27 GFF4283 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 78
Echinicola vietnamensis KMM 6221, DSM 17526 0.61 Echvi_3769 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 0.27 Echvi_2635 pyrroline-5-carboxylate reductase low > 79
Enterobacter asburiae PDN3 0.61 EX28DRAFT_3979 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 0.27 EX28DRAFT_2585 pyrroline-5-carboxylate reductase low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS27935 galactonate dehydratase 0.27 BWI76_RS06170 pyrroline-5-carboxylate reductase — —
Enterobacter sp. TBS_079 0.61 MPMX20_00011 D-galactonate dehydratase 0.27 MPMX20_00976 Pyrroline-5-carboxylate reductase low > 85
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.3080.1 Galactonate dehydratase (EC 4.2.1.6) 0.42 Xcc-8004.1710.1 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 74
Azospirillum sp. SherDot2 0.27 MPMX19_03902 D-galactonate dehydratase 0.31 MPMX19_01399 Pyrroline-5-carboxylate reductase — —
Pectobacterium carotovorum WPP14 0.26 HER17_RS07505 mandelate racemase/muconate lactonizing enzyme family protein 0.35 HER17_RS03805 pyrroline-5-carboxylate reductase — —
Dickeya dadantii 3937 0.25 DDA3937_RS14965 D-galactonate dehydratase family protein 0.38 DDA3937_RS17305 pyrroline-5-carboxylate reductase low > 74
Alteromonas macleodii MIT1002 0.25 MIT1002_00725 D-galactonate dehydratase 0.36 MIT1002_03062 Pyrroline-5-carboxylate reductase low > 70
Serratia liquefaciens MT49 0.24 IAI46_19025 D-galactonate dehydratase family protein 0.35 IAI46_21415 pyrroline-5-carboxylate reductase low > 86
Caulobacter crescentus NA1000 0.24 CCNA_00566 mannonate dehydratase 0.26 CCNA_00528 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 66
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_00566 mannonate dehydratase 0.26 CCNA_00528 pyrroline-5-carboxylate reductase low > 67
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS34970 bifunctional D-altronate/D-mannonate dehydratase 0.38 RR42_RS17360 pyrroline-5-carboxylate reductase — —
Variovorax sp. SCN45 0.24 GFF178 Mannonate dehydratase (EC 4.2.1.8) 0.38 GFF5553 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Agrobacterium fabrum C58 0.24 Atu4196 hypothetical protein 0.36 Atu2209 pyrroline-5-carboxylate reductase low > 89
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_1631 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 0.29 Ga0059261_3321 pyrroline-5-carboxylate reductase low > 68
Azospirillum brasilense Sp245 0.23 AZOBR_RS25270 mandelate racemase 0.31 AZOBR_RS06245 pyrroline-5-carboxylate reductase — —
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS13665 galactonate dehydratase 0.17 CA265_RS18505 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 88
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS06060 mandelate racemase/muconate lactonizing enzyme family protein 0.19 HMPREF1078_RS10620 pyrroline-5-carboxylate reductase low > 61
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF732 Muconate cycloisomerase (EC 5.5.1.1) 0.38 GFF2806 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 90
Phaeobacter inhibens DSM 17395 0.19 PGA1_c04540 putative d-galactonate dehydratase 0.29 PGA1_c24700 pyrroline-5-carboxylate reductase ProC low > 62
Variovorax sp. OAS795 0.17 ABID97_RS09975 L-rhamnonate dehydratase 0.38 ABID97_RS01555 pyrroline-5-carboxylate reductase — —
Bosea sp. OAE506 0.15 ABIE41_RS08260 mandelate racemase/muconate lactonizing enzyme family protein 0.26 ABIE41_RS11365 pyrroline-5-carboxylate reductase — —
Dinoroseobacter shibae DFL-12 0.14 Dshi_2447 Mandelate racemase/muconate lactonizing protein (RefSeq) 0.24 Dshi_2645 pyrroline-5-carboxylate reductase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.13 Psest_0369 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 0.72 Psest_0283 pyrroline-5-carboxylate reductase — —
Dechlorosoma suillum PS 0.08 Dsui_1891 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase 0.43 Dsui_0602 pyrroline-5-carboxylate reductase — —

Not shown: 1 genomes with orthologs for PS417_00165 only; 37 genomes with orthologs for PS417_26730 only