Conservation of cofitness between PS417_14035 and PS417_20575 in Pseudomonas simiae WCS417

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_14035 lactoylglutathione lyase 1.0 PS417_20575 ATP-dependent helicase HrpA 0.33 8
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS14580 lactoylglutathione lyase 0.98 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS14580 lactoylglutathione lyase 0.98 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_5009 Lactoylglutathione lyase (EC 4.4.1.5) 0.92 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13)
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_26955 lactoylglutathione lyase 0.92 AO353_18225 ATP-dependent RNA helicase HrpA low > 101
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_2929 Lactoylglutathione lyase (EC 4.4.1.5) 0.92 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_22815 lactoylglutathione lyase 0.92 AO356_04280 ATP-dependent RNA helicase HrpA low > 104
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_449 Lactoylglutathione lyase (EC 4.4.1.5) 0.92 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 103
Pseudomonas sp. RS175 0.93 PFR28_02480 Lactoylglutathione lyase 0.91 PFR28_00739 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_2973 Glyoxalase I 0.90 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_2973 Glyoxalase I 0.90 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas putida KT2440 0.83 PP_3766 Lactoylglutathione lyase 0.83 PP_4546 ATP-dependent helicase HrpA low > 96
Variovorax sp. SCN45 0.72 GFF7483 Lactoylglutathione lyase (EC 4.4.1.5) 0.38 GFF247 ATP-dependent helicase HrpA
Lysobacter sp. OAE881 0.71 ABIE51_RS04905 lactoylglutathione lyase 0.37 ABIE51_RS05155 ATP-dependent RNA helicase HrpA low > 62
Serratia liquefaciens MT49 0.66 IAI46_13865 lactoylglutathione lyase 0.47 IAI46_13330 ATP-dependent RNA helicase HrpA low > 86
Marinobacter adhaerens HP15 0.55 HP15_2890 lactoylglutathione lyase 0.49 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type low > 73
Alteromonas macleodii MIT1002 0.48 MIT1002_02929 Lactoylglutathione lyase 0.45 MIT1002_01685 ATP-dependent RNA helicase HrpB low > 70
Acinetobacter radioresistens SK82 0.26 MPMX26_01061 Lactoylglutathione lyase 0.37 MPMX26_02008 hypothetical protein low > 36
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_05140 lactoylglutathione lyase 0.47 CSW01_06950 ATP-dependent RNA helicase HrpA low > 62
Pseudomonas stutzeri RCH2 0.26 Psest_3120 lactoylglutathione lyase 0.80 Psest_1339 ATP-dependent helicase HrpA low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF3511 Lactoylglutathione lyase (EC 4.4.1.5) 0.38 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 90
Variovorax sp. OAS795 0.25 ABID97_RS21275 lactoylglutathione lyase 0.39 ABID97_RS16615 ATP-dependent RNA helicase HrpA low > 91
Dickeya dadantii 3937 0.25 DDA3937_RS12600 lactoylglutathione lyase 0.47 DDA3937_RS12270 ATP-dependent RNA helicase HrpA low > 74
Pseudomonas sp. S08-1 0.24 OH686_03925 lactoylglutathione lyase 0.80 OH686_05730 RNA helicase HrpA low > 80
Acidovorax sp. GW101-3H11 0.24 Ac3H11_2251 Lactoylglutathione lyase (EC 4.4.1.5) 0.38 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 79
Dickeya dianthicola 67-19 0.24 HGI48_RS12660 lactoylglutathione lyase 0.46 HGI48_RS12360 ATP-dependent RNA helicase HrpA low > 71
Dickeya dianthicola ME23 0.24 DZA65_RS13115 lactoylglutathione lyase 0.47 DZA65_RS12800 ATP-dependent RNA helicase HrpA low > 75
Pantoea sp. MT58 0.24 IAI47_10770 lactoylglutathione lyase 0.46 IAI47_09520 ATP-dependent RNA helicase HrpA low > 76
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS03550 glyoxalase I 0.39 HSERO_RS17315 ATP-dependent helicase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_04643 methylmalonyl-CoA epimerase 0.35 H281DRAFT_00445 ATP-dependent helicase HrpA low > 103
Paraburkholderia graminis OAS925 0.24 ABIE53_000803 lactoylglutathione lyase 0.39 ABIE53_002813 ATP-dependent helicase HrpA low > 113
Pectobacterium carotovorum WPP14 0.24 HER17_RS09260 lactoylglutathione lyase 0.46 HER17_RS09660 ATP-dependent RNA helicase HrpA low > 75
Kangiella aquimarina DSM 16071 0.24 B158DRAFT_1242 lactoylglutathione lyase 0.39 B158DRAFT_1779 ATP-dependent helicase HrpA low > 40
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_17075 gloA lactoylglutathione lyase 0.35 OKGIIK_02155 hrpA ATP-dependent RNA helicase HrpA low > 52
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS02800 glyoxalase I 0.41 RR42_RS13030 ATP-dependent helicase low > 128
Ralstonia solanacearum GMI1000 0.23 RS_RS02590 lactoylglutathione lyase 0.41 RS_RS06270 ATP-dependent RNA helicase HrpA low > 80
Erwinia tracheiphila SCR3 0.23 LU632_RS11225 gloA lactoylglutathione lyase 0.44 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA low > 74
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS02140 lactoylglutathione lyase 0.36 QEN71_RS05625 ATP-dependent RNA helicase HrpA low > 153
Ralstonia solanacearum PSI07 0.23 RPSI07_RS21450 lactoylglutathione lyase 0.41 RPSI07_RS17865 ATP-dependent RNA helicase HrpA low > 81
Shewanella oneidensis MR-1 0.23 SO2044 gloA lactoylglutathione lyase (NCBI ptt file) 0.48 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) low > 76
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS11765 lactoylglutathione lyase 0.41 RALBFv3_RS15490 ATP-dependent RNA helicase HrpA low > 76
Ralstonia solanacearum UW163 0.23 UW163_RS01820 lactoylglutathione lyase 0.41 UW163_RS12950 ATP-dependent RNA helicase HrpA
Shewanella sp. ANA-3 0.23 Shewana3_2232 lactoylglutathione lyase (RefSeq) 0.47 Shewana3_1897 ATP-dependent helicase HrpA (RefSeq)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF3623 Lactoylglutathione lyase (EC 4.4.1.5) 0.46 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 78
Castellaniella sp019104865 MT123 0.22 ABCV34_RS09485 lactoylglutathione lyase 0.39 ABCV34_RS02420 ATP-dependent RNA helicase HrpA low > 48
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS03320 lactoylglutathione lyase 0.39 BPHYT_RS12980 ATP-dependent helicase low > 109
Escherichia coli ECRC62 0.22 BNILDI_16740 Lactoylglutathione lyase 0.46 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli BL21 0.22 ECD_01621 glyoxalase I, Ni-dependent 0.46 ECD_01368 putative ATP-dependent helicase 0.29 57
Escherichia coli BW25113 0.22 b1651 gloA glyoxalase I, Ni-dependent (NCBI) 0.46 b1413 hrpA ATP-dependent helicase (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_02074 Lactoylglutathione lyase 0.46 OHPLBJKB_02301 hypothetical protein low > 73
Escherichia coli ECRC98 0.22 JDDGAC_02020 Lactoylglutathione lyase 0.46 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli ECOR38 0.22 HEPCGN_05815 Lactoylglutathione lyase 0.46 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA low > 85
Escherichia coli ECRC101 0.22 OKFHMN_27430 Lactoylglutathione lyase 0.46 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli ECOR27 0.22 NOLOHH_17950 Lactoylglutathione lyase 0.46 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli ECRC101 0.22 MCAODC_17980 Lactoylglutathione lyase 0.46 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli ECRC99 0.22 KEDOAH_00680 Lactoylglutathione lyase 0.46 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli ECRC102 0.22 NIAGMN_00635 Lactoylglutathione lyase 0.46 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli Nissle 1917 0.22 ECOLIN_RS09205 lactoylglutathione lyase 0.46 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA
Enterobacter asburiae PDN3 0.22 EX28DRAFT_1649 lactoylglutathione lyase 0.46 EX28DRAFT_1357 RNA helicase HrpA low > 76
Escherichia fergusonii Becca 0.22 EFB2_02341 Lactoylglutathione lyase 0.46 EFB2_02565 hypothetical protein low > 86
Enterobacter sp. TBS_079 0.22 MPMX20_01985 Lactoylglutathione lyase 0.46 MPMX20_02189 hypothetical protein low > 85
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS07720 lactoylglutathione lyase 0.41 ABZR87_RS11020 ATP-dependent RNA helicase HrpA low > 80
Klebsiella michiganensis M5al 0.22 BWI76_RS16480 lactoylglutathione lyase 0.46 BWI76_RS13165 ATP-dependent RNA helicase HrpA low > 92
Shewanella amazonensis SB2B 0.21 Sama_1837 lactoylglutathione lyase (RefSeq) 0.47 Sama_1619 ATP-dependent helicase HrpA (RefSeq) low > 62
Shewanella loihica PV-4 0.21 Shew_2073 lactoylglutathione lyase (RefSeq) 0.47 Shew_1767 ATP-dependent helicase HrpA (RefSeq) 0.30 17
Dechlorosoma suillum PS 0.21 Dsui_1204 lactoylglutathione lyase 0.41 Dsui_1373 ATP-dependent helicase HrpA low > 51
Rahnella sp. WP5 0.19 EX31_RS13810 lactoylglutathione lyase 0.46 EX31_RS06495 ATP-dependent RNA helicase HrpA low > 89
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS17390 VOC family protein 0.38 ABZR86_RS19720 ATP-dependent RNA helicase HrpA low > 74

Not shown: 18 genomes with orthologs for PS417_14035 only; 1 genomes with orthologs for PS417_20575 only