Conservation of cofitness between PS417_10540 and PS417_20030 in Pseudomonas simiae WCS417

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_10540 NAD-dependent deacetylase 1.0 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.20 5
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS10600 NAD-dependent protein deacetylase 0.87 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS10600 NAD-dependent protein deacetylase 0.87 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.40 63
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_21660 NAD-dependent deacetylase 0.76 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family 0.79 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_26795 NAD-dependent deacetylase 0.84 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 101
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2362 Silent information regulator protein Sir2 0.77 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2362 Silent information regulator protein Sir2 0.77 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_03044 NAD-dependent protein deacetylase, SIR2 family 0.36 H281DRAFT_00139 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS18330 NAD-dependent deacetylase 0.32 HSERO_RS09770 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 78
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS29640 NAD-dependent deacetylase 0.34 BPHYT_RS04865 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS27705 NAD-dependent deacetylase 0.35 RR42_RS16120 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.391.1 NAD-dependent protein deacetylase of SIR2 family 0.50 Xcc-8004.1398.1 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 74
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS20510 NAD-dependent protein deacetylase 0.35 QEN71_RS25130 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 153
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS05345 NAD-dependent protein deacetylase 0.49 ABZR86_RS10890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 74
Lysobacter sp. OAE881 0.42 ABIE51_RS09130 NAD-dependent protein deacetylase 0.49 ABIE51_RS04975 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 62
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_08275 NAD-dependent protein deacetylase 0.52 OKGIIK_05510 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 52
Ralstonia solanacearum PSI07 0.20 RPSI07_RS18020 NAD-dependent deacylase 0.38 RPSI07_RS12890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 81
Variovorax sp. SCN45 0.20 GFF5049 NAD-dependent protein deacetylase of SIR2 family 0.32 GFF425 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Pseudomonas stutzeri RCH2 0.19 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 0.55 Psest_3006 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 67
Rhodopseudomonas palustris CGA009 0.19 TX73_013035 NAD-dependent protein deacetylase 0.32 TX73_010790 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 86
Ralstonia solanacearum GMI1000 0.19 RS_RS06165 NAD-dependent deacylase 0.34 RS_RS12035 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS10995 NAD-dependent deacylase 0.32 ABZR87_RS00075 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Bosea sp. OAE506 0.19 ABIE41_RS14930 Sir2 family NAD-dependent protein deacetylase 0.30 ABIE41_RS21245 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS15355 NAD-dependent deacylase 0.38 RALBFv3_RS04480 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 76
Ralstonia solanacearum UW163 0.18 UW163_RS12820 NAD-dependent deacylase 0.38 UW163_RS09190 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.17 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.54 OH686_04955 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Dechlorosoma suillum PS 0.17 Dsui_2796 NAD-dependent protein deacetylase, SIR2 family 0.35 Dsui_0472 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 51
Mycobacterium tuberculosis H37Rv 0.17 Rv1151c Transcriptional regulatory protein 0.26 Rv2207 Probable nicotinate-nucleotide-dimethylbenzimidazol phosphoribosyltransferase CobT — —
Pseudomonas putida KT2440 0.17 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.68 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 96
Fusobacterium nucleatum SB010 0.16 HUW76_06465 NAD-dependent protein deacylase 0.27 HUW76_05630 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 35
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_3134 NAD-dependent protein deacetylases, SIR2 family 0.35 Echvi_3759 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 79
Acidovorax sp. GW101-3H11 0.15 Ac3H11_4140 NAD-dependent protein deacetylase of SIR2 family 0.34 Ac3H11_1000 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 79
Azospirillum sp. SherDot2 0.14 MPMX19_02648 NAD-dependent protein deacylase 0.32 MPMX19_00312 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.14 GFF4837 NAD-dependent protein deacetylase of SIR2 family 0.34 GFF3999 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Azospirillum brasilense Sp245 0.14 AZOBR_RS00620 NAD-dependent deacetylase 0.34 AZOBR_RS03460 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.14 Ga0059261_1943 NAD-dependent protein deacetylases, SIR2 family 0.34 Ga0059261_0625 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 68
Shewanella oneidensis MR-1 0.13 SO1938 cobB cobB protein (NCBI ptt file) 0.35 SO1035 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NCBI ptt file) low > 76
Rhodospirillum rubrum S1H 0.13 Rru_A3645 Silent information regulator protein Sir2 (NCBI) 0.25 Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) low > 58
Shewanella loihica PV-4 0.13 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.33 Shew_0714 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) low > 60
Magnetospirillum magneticum AMB-1 0.13 AMB_RS04415 NAD-dependent protein deacylase 0.28 AMB_RS02805 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Shewanella sp. ANA-3 0.13 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.37 Shewana3_3278 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.28 GFF3969 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 78
Dinoroseobacter shibae DFL-12 0.13 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) 0.33 Dshi_0788 Nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) — —
Escherichia fergusonii Becca 0.13 EFB2_02855 NAD-dependent protein deacylase 0.28 EFB2_01898 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 86
Escherichia coli Nissle 1917 0.13 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 0.28 ECOLIN_RS11620 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC98 0.13 JDDGAC_07100 cobB NAD-dependent protein deacylase 0.28 JDDGAC_29265 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC99 0.13 KEDOAH_24315 cobB NAD-dependent protein deacylase 0.28 KEDOAH_02975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC102 0.13 NIAGMN_24390 cobB NAD-dependent protein deacylase 0.28 NIAGMN_22640 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC101 0.13 OKFHMN_03440 cobB NAD-dependent protein deacylase 0.28 OKFHMN_25135 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC101 0.13 MCAODC_22800 cobB NAD-dependent protein deacylase 0.28 MCAODC_20255 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli BL21 0.13 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 0.28 ECD_01900 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_02546 NAD-dependent protein deacylase 0.28 OHPLBJKB_01717 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 73
Escherichia coli ECRC62 0.13 BNILDI_19130 cobB NAD-dependent protein deacylase 0.28 BNILDI_14875 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECOR27 0.13 NOLOHH_20965 cobB NAD-dependent protein deacylase 0.28 NOLOHH_16045 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECOR38 0.13 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.28 HEPCGN_03470 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 85
Phocaeicola dorei CL03T12C01 0.12 ABI39_RS04165 NAD-dependent deacylase 0.32 ABI39_RS16455 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.12 HMPREF1058_RS12545 NAD-dependent deacylase 0.32 HMPREF1058_RS01275 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 67
Escherichia coli BW25113 0.12 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 0.28 b1991 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (NCBI) low > 76
Shewanella amazonensis SB2B 0.12 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.35 Sama_0762 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) low > 62
Caulobacter crescentus NA1000 0.12 CCNA_03594 SIR2 family protein 0.09 CCNA_01367 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_03594 SIR2 family protein 0.09 CCNA_01367 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 67

Not shown: 12 genomes with orthologs for PS417_10540 only; 17 genomes with orthologs for PS417_20030 only