Conservation of cofitness between Psest_0498 and Psest_3926 in Pseudomonas stutzeri RCH2

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0498 ribosome small subunit-dependent GTPase A 1.0 Psest_3926 GTP-binding protein TypA/BipA 0.32 8
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1421 Ribosome small subunit-stimulated GTPase EngC 0.65 Pf1N1B4_1601 GTP-binding protein TypA/BipA — —
Pseudomonas sp. RS175 0.86 PFR28_05112 Small ribosomal subunit biogenesis GTPase RsgA 0.81 PFR28_04951 GTP-binding protein TypA/BipA — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_13100 GTPase RsgA 0.81 AO353_12180 GTP-binding protein TypA — —
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3623 Ribosome small subunit-stimulated GTPase EngC 0.81 Pf6N2E2_3818 GTP-binding protein TypA/BipA — —
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS02525 small ribosomal subunit biogenesis GTPase RsgA 0.81 PFLU_RS01720 translational GTPase TypA — —
Pseudomonas simiae WCS417 0.85 PS417_02445 GTPase RsgA 0.80 PS417_01665 GTP-binding protein TypA — —
Pseudomonas fluorescens SBW25 0.85 PFLU_RS02525 small ribosomal subunit biogenesis GTPase RsgA 0.81 PFLU_RS01720 translational GTPase TypA — —
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_163 Ribosome small subunit-stimulated GTPase EngC 0.80 PfGW456L13_340 GTP-binding protein TypA/BipA — —
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_08700 GTPase RsgA 0.81 AO356_09695 GTP-binding protein TypA — —
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_0563 Protein of unknown function DUF258 0.81 Psyr_4815 Small GTP-binding protein domain:GTP-binding protein TypA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_0563 Protein of unknown function DUF258 0.81 Psyr_4815 Small GTP-binding protein domain:GTP-binding protein TypA — —
Pseudomonas sp. S08-1 0.84 OH686_09515 ribosome small subunit-dependent GTPase A 0.94 OH686_10610 GTP-binding protein TypA/BipA — —
Pseudomonas putida KT2440 0.82 PP_4903 Putative ribosome biogenesis GTPase RsgA 0.81 PP_5044 ribosome associated GTPase — —
Marinobacter adhaerens HP15 0.56 HP15_2507 ribosome-associated GTPase 0.89 HP15_429 GTP-binding protein TypA — —
Dickeya dadantii 3937 0.45 DDA3937_RS18945 small ribosomal subunit biogenesis GTPase RsgA 0.72 DDA3937_RS00140 ribosome-dependent GTPase TypA — —
Dickeya dianthicola 67-19 0.45 HGI48_RS19040 small ribosomal subunit biogenesis GTPase RsgA 0.72 HGI48_RS21220 ribosome-dependent GTPase TypA — —
Dickeya dianthicola ME23 0.45 DZA65_RS20155 small ribosomal subunit biogenesis GTPase RsgA 0.72 DZA65_RS22195 ribosome-dependent GTPase TypA — —
Shewanella loihica PV-4 0.44 Shew_0558 ribosome-associated GTPase (RefSeq) 0.70 Shew_3553 GTP-binding protein TypA (RefSeq) — —
Serratia liquefaciens MT49 0.44 IAI46_01570 small ribosomal subunit biogenesis GTPase RsgA 0.71 IAI46_24945 ribosome-dependent GTPase TypA — —
Rahnella sp. WP5 0.44 EX31_RS08870 small ribosomal subunit biogenesis GTPase RsgA 0.70 EX31_RS15865 ribosome-dependent GTPase TypA — —
Escherichia coli BW25113 0.43 b4161 yjeQ orf, hypothetical protein (VIMSS) 0.73 b3871 bipA GTP-binding protein (NCBI) — —
Escherichia coli BL21 0.43 ECD_04031 ribosome small subunit-dependent GTPase A 0.73 ECD_03756 GTP-binding protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03881 Small ribosomal subunit biogenesis GTPase RsgA 0.73 OHPLBJKB_04181 GTP-binding protein TypA/BipA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF1990 Ribosome small subunit-stimulated GTPase EngC 0.72 GFF2223 GTP-binding protein TypA/BipA — —
Escherichia coli ECRC99 0.43 KEDOAH_15845 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.73 KEDOAH_14060 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC101 0.43 MCAODC_02830 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.73 MCAODC_04590 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC102 0.43 NIAGMN_10165 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.73 NIAGMN_11845 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC98 0.43 JDDGAC_15955 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.73 JDDGAC_17715 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECOR27 0.43 NOLOHH_04580 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.73 NOLOHH_06220 typA ribosome-dependent GTPase TypA — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS24175 small ribosomal subunit biogenesis GTPase RsgA 0.73 ECOLIN_RS22315 ribosome-dependent GTPase TypA — —
Escherichia coli ECRC62 0.43 BNILDI_06910 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.73 BNILDI_05310 typA ribosome-dependent GTPase TypA — —
Escherichia fergusonii Becca 0.43 EFB2_04374 Small ribosomal subunit biogenesis GTPase RsgA 0.73 EFB2_04745 GTP-binding protein TypA/BipA — —
Escherichia coli ECRC101 0.43 OKFHMN_12320 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.73 OKFHMN_14090 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECOR38 0.43 HEPCGN_10545 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.73 HEPCGN_12720 typA ribosome-dependent GTPase TypA — —
Pectobacterium carotovorum WPP14 0.43 HER17_RS02410 small ribosomal subunit biogenesis GTPase RsgA 0.71 HER17_RS21425 ribosome-dependent GTPase TypA — —
Klebsiella michiganensis M5al 0.42 BWI76_RS02475 ribosome small subunit-dependent GTPase 0.72 BWI76_RS00410 translational GTPase TypA — —
Pantoea sp. MT58 0.42 IAI47_02535 small ribosomal subunit biogenesis GTPase RsgA 0.71 IAI47_00465 ribosome-dependent GTPase TypA — —
Shewanella amazonensis SB2B 0.42 Sama_3033 ribosome-associated GTPase (RefSeq) 0.70 Sama_3415 virulence regulator BipA (RefSeq) — —
Alteromonas macleodii MIT1002 0.42 MIT1002_00495 Putative ribosome biogenesis GTPase RsgA 0.70 MIT1002_03181 hypothetical protein — —
Shewanella oneidensis MR-1 0.42 SO0591 conserved hypothetical protein TIGR00157 (NCBI ptt file) 0.70 SO4408 bipA virulence regulator BipA (NCBI ptt file) — —
Shewanella sp. ANA-3 0.42 Shewana3_0589 ribosome-associated GTPase (RefSeq) 0.70 Shewana3_0301 GTP-binding protein TypA (RefSeq) — —
Erwinia tracheiphila SCR3 0.40 LU632_RS01945 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.70 LU632_RS22150 typA ribosome-dependent GTPase TypA — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_3359 ribosome small subunit-dependent GTPase A 0.72 EX28DRAFT_4353 GTP-binding protein TypA/BipA — —
Enterobacter sp. TBS_079 0.40 MPMX20_00442 Small ribosomal subunit biogenesis GTPase RsgA 0.72 MPMX20_04594 GTP-binding protein TypA/BipA — —
Acinetobacter radioresistens SK82 0.39 MPMX26_02631 Small ribosomal subunit biogenesis GTPase RsgA 0.73 MPMX26_02489 GTP-binding protein TypA/BipA low > 36
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1944 ribosome small subunit-dependent GTPase A 0.70 B158DRAFT_0725 GTP-binding protein TypA/BipA low > 40
Dechlorosoma suillum PS 0.29 Dsui_3225 ribosome small subunit-dependent GTPase A 0.60 Dsui_2423 GTP-binding protein TypA/BipA — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS09635 ribosome small subunit-dependent GTPase A 0.61 ABZR87_RS11245 translational GTPase TypA low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS19530 ribosome small subunit-dependent GTPase A 0.60 RPSI07_RS17640 translational GTPase TypA — —
Ralstonia solanacearum UW163 0.28 UW163_RS15870 ribosome small subunit-dependent GTPase A 0.60 UW163_RS13160 translational GTPase TypA — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS04245 ribosome small subunit-dependent GTPase A 0.61 QEN71_RS23065 translational GTPase TypA — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS13940 ribosome small subunit-dependent GTPase A 0.60 RALBFv3_RS15715 translational GTPase TypA — —
Ralstonia solanacearum GMI1000 0.28 RS_RS04675 GTPase RsgA 0.60 RS_RS06495 translational GTPase TypA — —
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_04299 ribosome biogenesis GTPase 0.61 H281DRAFT_05111 GTP-binding protein — —
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS14730 GTPase RsgA 0.61 BPHYT_RS08105 GTP-binding protein — —
Paraburkholderia graminis OAS925 0.27 ABIE53_003121 ribosome biogenesis GTPase 0.61 ABIE53_002454 GTP-binding protein — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_1834 ribosome small subunit-dependent GTPase A 0.49 Echvi_4063 GTP-binding protein TypA/BipA — —
Castellaniella sp019104865 MT123 0.26 ABCV34_RS07005 ribosome small subunit-dependent GTPase A 0.59 ABCV34_RS02140 translational GTPase TypA — —
Bacteroides thetaiotaomicron VPI-5482 0.26 BT2250 putative GTPase (NCBI ptt file) 0.51 BT2787 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03093 ribosome small subunit-dependent GTPase A 0.51 BACOVA_01078 GTP-binding protein TypA — —
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS23860 ribosome small subunit-dependent GTPase A 0.49 CA265_RS23750 translational GTPase TypA — —
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS09445 ribosome small subunit-dependent GTPase A 0.50 HMPREF1181_RS01180 translational GTPase TypA — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS20340 ribosome small subunit-dependent GTPase A 0.50 ABZR88_RS00415 translational GTPase TypA — —
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS07195 GTPase RsgA 0.58 HSERO_RS17980 GTP-binding protein — —
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS13840 ribosome small subunit-dependent GTPase A 0.50 HMPREF1058_RS10055 translational GTPase TypA — —
Parabacteroides merdae CL09T00C40 0.24 HMPREF1078_RS05190 ribosome small subunit-dependent GTPase A 0.49 HMPREF1078_RS17580 translational GTPase TypA — —
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS09450 ribosome small subunit-dependent GTPase A 0.50 ABI39_RS06695 translational GTPase TypA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF5734 Ribosome small subunit-stimulated GTPase EngC 0.56 GFF4346 GTP-binding protein TypA/BipA 0.69 10
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1680 Ribosome small subunit-stimulated GTPase EngC 0.57 Ac3H11_2864 GTP-binding protein TypA/BipA — —
Variovorax sp. OAS795 0.21 ABID97_RS08775 ribosome small subunit-dependent GTPase A 0.57 ABID97_RS16470 translational GTPase TypA low > 91
Variovorax sp. SCN45 0.21 GFF3957 Ribosome small subunit biogenesis RbfA-release protein RsgA 0.56 GFF219 GTP-binding protein TypA/BipA low > 127
Fusobacterium nucleatum SB010 0.20 HUW76_06405 ribosome small subunit-dependent GTPase A 0.53 HUW76_06170 translational GTPase TypA low > 35
Bosea sp. OAE506 0.18 ABIE41_RS16730 ribosome small subunit-dependent GTPase A 0.49 ABIE41_RS04255 translational GTPase TypA low > 77

Not shown: 0 genomes with orthologs for Psest_0498 only; 27 genomes with orthologs for Psest_3926 only