Conservation of cofitness between HP15_622 and HP15_3355 in Marinobacter adhaerens HP15

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_622 exoribonuclease R 1.0 HP15_3355 multi-sensor signal transduction histidine kinase 0.50 16
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R 0.47 Pf6N2E2_4067 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_08610 exoribonuclease R 0.47 AO356_11005 histidine kinase low > 104
Pseudomonas sp. RS175 0.52 PFR28_05130 Ribonuclease R 0.45 PFR28_04480 Phosphate regulon sensor protein PhoR low > 88
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_144 3'-to-5' exoribonuclease RNase R 0.44 PfGW456L13_761 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 87
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_13200 exoribonuclease R 0.45 AO353_09860 histidine kinase low > 101
Pseudomonas simiae WCS417 0.52 PS417_02555 exoribonuclease R 0.47 PS417_28040 histidine kinase low > 88
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS02625 ribonuclease R 0.47 PFLU_RS29730 phosphate regulon sensor histidine kinase PhoR low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS02625 ribonuclease R 0.47 PFLU_RS29730 phosphate regulon sensor histidine kinase PhoR low > 109
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R 0.45 Pf1N1B4_2043 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 87
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_0579 RNAse R 0.48 Psyr_5033 PAS/PAC sensor signal transduction histidine kinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_0579 RNAse R 0.48 Psyr_5033 PAS/PAC sensor signal transduction histidine kinase low > 86
Pseudomonas sp. S08-1 0.51 OH686_15910 ribonuclease R 0.46 OH686_13460 phosphate regulon sensor kinase PhoR low > 80
Pseudomonas putida KT2440 0.51 PP_4880 exoribonuclease R 0.47 PP_5321 two-component system sensory histidine kinase low > 96
Pseudomonas stutzeri RCH2 0.51 Psest_0691 ribonuclease R 0.45 Psest_3846 phosphate regulon sensor kinase PhoR low > 67
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.32 GFF4297 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 78
Shewanella loihica PV-4 0.46 Shew_3289 ribonuclease R (RefSeq) 0.30 Shew_2748 PAS/PAC sensor signal transduction histidine kinase (RefSeq) low > 60
Klebsiella michiganensis M5al 0.46 BWI76_RS02575 exoribonuclease R 0.33 BWI76_RS06235 PAS domain-containing sensor histidine kinase low > 92
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3376 ribonuclease R 0.33 EX28DRAFT_2574 phosphate regulon sensor kinase PhoR low > 76
Enterobacter sp. TBS_079 0.46 MPMX20_00460 Ribonuclease R 0.33 MPMX20_00987 Phosphate regulon sensor protein PhoR low > 85
Escherichia coli Nissle 1917 0.46 ECOLIN_RS24265 ribonuclease R 0.31 ECOLIN_RS02415 phosphate regulon sensor histidine kinase PhoR low > 52
Escherichia coli BW25113 0.46 b4179 vacB putative enzyme (VIMSS) 0.31 b0400 phoR sensory histidine kinase in two-component regulatory system with PhoB (NCBI) 0.30 33
Escherichia coli BL21 0.46 ECD_04046 exoribonuclease R, RNase R 0.31 ECD_00348 sensory histidine kinase in two-component regulatory system with PhoB low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03863 Ribonuclease R 0.31 OHPLBJKB_03276 Phosphate regulon sensor protein PhoR low > 73
Escherichia coli ECRC102 0.46 NIAGMN_10070 rnr ribonuclease R 0.31 NIAGMN_06595 phoR phosphate regulon sensor histidine kinase PhoR — —
Escherichia coli ECRC99 0.46 KEDOAH_15935 rnr ribonuclease R 0.31 KEDOAH_19425 phoR phosphate regulon sensor histidine kinase PhoR — —
Escherichia coli ECRC98 0.46 JDDGAC_15860 rnr ribonuclease R 0.31 JDDGAC_12195 phoR phosphate regulon sensor histidine kinase PhoR — —
Escherichia coli ECRC101 0.46 MCAODC_02735 rnr ribonuclease R 0.31 MCAODC_27765 phoR phosphate regulon sensor histidine kinase PhoR — —
Escherichia coli ECRC62 0.46 BNILDI_07005 rnr ribonuclease R 0.31 BNILDI_22885 phoR phosphate regulon sensor histidine kinase PhoR — —
Escherichia coli ECOR27 0.46 NOLOHH_04485 rnr ribonuclease R 0.31 NOLOHH_01470 phoR phosphate regulon sensor histidine kinase PhoR low > 57
Escherichia fergusonii Becca 0.46 EFB2_04356 Ribonuclease R 0.31 EFB2_03657 Phosphate regulon sensor protein PhoR low > 86
Escherichia coli ECRC101 0.46 OKFHMN_12220 rnr ribonuclease R 0.31 OKFHMN_08540 phoR phosphate regulon sensor histidine kinase PhoR — —
Escherichia coli ECOR38 0.46 HEPCGN_10450 rnr ribonuclease R 0.31 HEPCGN_07180 phoR phosphate regulon sensor histidine kinase PhoR low > 85
Pectobacterium carotovorum WPP14 0.45 HER17_RS03835 ribonuclease R 0.31 HER17_RS16035 phosphate regulon sensor histidine kinase PhoR low > 75
Erwinia tracheiphila SCR3 0.45 LU632_RS21750 rnr ribonuclease R 0.29 LU632_RS18920 phoR phosphate regulon sensor histidine kinase PhoR low > 74
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_13155 ribonuclease R 0.35 CSW01_03765 two-component system sensor histidine kinase PhoR low > 62
Pantoea sp. MT58 0.45 IAI47_02625 ribonuclease R 0.29 IAI47_14850 phosphate regulon sensor histidine kinase PhoR low > 76
Dickeya dadantii 3937 0.45 DDA3937_RS17260 ribonuclease R 0.29 DDA3937_RS05430 phosphate regulon sensor histidine kinase PhoR low > 74
Dickeya dianthicola ME23 0.45 DZA65_RS18405 ribonuclease R 0.30 DZA65_RS05815 phosphate regulon sensor histidine kinase PhoR low > 75
Rahnella sp. WP5 0.45 EX31_RS08785 ribonuclease R 0.30 EX31_RS22045 phosphate regulon sensor histidine kinase PhoR low > 89
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_1989 ribonuclease R 0.37 B158DRAFT_0896 phosphate regulon sensor kinase PhoR low > 40
Dickeya dianthicola 67-19 0.45 HGI48_RS17315 ribonuclease R 0.30 HGI48_RS05490 phosphate regulon sensor histidine kinase PhoR low > 71
Serratia liquefaciens MT49 0.44 IAI46_01660 ribonuclease R 0.31 IAI46_04780 phosphate regulon sensor histidine kinase PhoR low > 86
Shewanella sp. ANA-3 0.44 Shewana3_0697 RNAse R (RefSeq) 0.32 Shewana3_2878 PAS/PAC sensor signal transduction histidine kinase (RefSeq) low > 73
Dechlorosoma suillum PS 0.44 Dsui_3128 ribonuclease R 0.32 Dsui_0864 phosphate regulon sensor kinase PhoR low > 51
Shewanella oneidensis MR-1 0.44 SO3935 vacB ribonuclease R (NCBI ptt file) 0.32 SO1559 phoR phosphate regulon sensor protein PhoR (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS13065 ribonuclease R 0.32 RR42_RS13440 histidine kinase low > 128
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS09290 ribonuclease R 0.32 HSERO_RS06340 histidine kinase low > 78
Ralstonia solanacearum PSI07 0.44 RPSI07_RS18030 ribonuclease R 0.33 RPSI07_RS15325 phosphate regulon sensor histidine kinase PhoR low > 81
Ralstonia solanacearum GMI1000 0.43 RS_RS06155 ribonuclease R 0.34 RS_RS07700 phosphate regulon sensor histidine kinase PhoR low > 80
Ralstonia solanacearum UW163 0.43 UW163_RS12810 ribonuclease R 0.33 UW163_RS15430 phosphate regulon sensor histidine kinase PhoR — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS15345 ribonuclease R 0.33 RALBFv3_RS02120 phosphate regulon sensor histidine kinase PhoR low > 76
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS10985 ribonuclease R 0.32 ABZR87_RS14070 phosphate regulon sensor histidine kinase PhoR low > 80
Alteromonas macleodii MIT1002 0.43 MIT1002_03606 Ribonuclease R 0.36 MIT1002_00752 Phosphate regulon sensor protein PhoR low > 70
Shewanella amazonensis SB2B 0.42 Sama_3067 exoribonuclease II (RefSeq) 0.30 Sama_1075 phosphate regulon sensor protein PhoR (RefSeq) low > 62
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS08455 ribonuclease R 0.30 BPHYT_RS14115 sensor histidine kinase low > 109
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS22925 ribonuclease R 0.29 QEN71_RS04850 phosphate regulon sensor histidine kinase PhoR low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_001940 ribonuclease R 0.31 ABIE53_002989 two-component system phosphate regulon sensor histidine kinase PhoR low > 113
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_00712 RNAse R 0.31 H281DRAFT_04417 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR low > 103
Castellaniella sp019104865 MT123 0.41 ABCV34_RS06625 ribonuclease R 0.28 ABCV34_RS14465 phosphate regulon sensor histidine kinase PhoR low > 48
Lysobacter sp. OAE881 0.39 ABIE51_RS07475 ribonuclease R 0.29 ABIE51_RS14225 phosphate regulon sensor histidine kinase PhoR low > 62
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R 0.26 Xcc-8004.4063.1 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 74
Acidovorax sp. GW101-3H11 0.39 Ac3H11_412 3'-to-5' exoribonuclease RNase R 0.30 Ac3H11_462 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF4921 3'-to-5' exoribonuclease RNase R 0.31 GFF4236 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 90
Variovorax sp. OAS795 0.38 ABID97_RS17200 ribonuclease R 0.30 ABID97_RS14625 phosphate regulon sensor histidine kinase PhoR 0.57 91
Variovorax sp. SCN45 0.38 GFF399 3'-to-5' exoribonuclease RNase R 0.30 GFF1098 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) 0.72 73
Acinetobacter radioresistens SK82 0.35 MPMX26_02684 Ribonuclease R 0.37 MPMX26_02959 Phosphate regulon sensor protein PhoR low > 36

Not shown: 15 genomes with orthologs for HP15_622 only; 2 genomes with orthologs for HP15_3355 only