Conservation of cofitness between GFF4954 and GFF3138 in Sphingobium sp. HT1-2

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF4954 Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA 1.0 GFF3138 Translation elongation factor LepA low > 95
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_4024 Predicted phosphotransferase related to Ser/Thr protein kinases 0.85 Ga0059261_3979 elongation factor 4 low > 68
Rhodospirillum rubrum S1H 0.37 Rru_A3437 Aminoglycoside phosphotransferase (NCBI) 0.71 Rru_A3365 Small GTP-binding protein domain (NCBI) — —
Magnetospirillum magneticum AMB-1 0.35 AMB_RS21475 aminoglycoside phosphotransferase 0.73 AMB_RS19545 elongation factor 4 — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_3435 aminoglycoside phosphotransferase (RefSeq) 0.72 Dshi_0809 GTP-binding protein LepA (RefSeq) low > 64
Azospirillum brasilense Sp245 0.31 AZOBR_RS00580 aminoglycoside phosphotransferase 0.74 AZOBR_RS00860 elongation factor 4 low > 97
Phaeobacter inhibens DSM 17395 0.31 PGA1_c35340 putative phosphotransferase 0.73 PGA1_c24090 GTP-binding protein LepA — —
Azospirillum sp. SherDot2 0.30 MPMX19_02725 N-acetylmuramate/N-acetylglucosamine kinase 0.74 MPMX19_00092 Elongation factor 4 — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS11275 phosphotransferase 0.76 A4249_RS10390 translation elongation factor 4 low > 48
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_03649 Ser/Thr kinase-related phosphotransferase 0.73 CCNA_01086 GTP-binding protein lepA low > 67
Caulobacter crescentus NA1000 0.26 CCNA_03649 Ser/Thr kinase-related phosphotransferase 0.73 CCNA_01086 GTP-binding protein lepA low > 66
Pseudomonas aeruginosa PA14 0.26 IKLFDK_22430 N-acetylmuramate/N-acetylglucosamine kinase 0.62 IKLFDK_03290 translation elongation factor 4 low > 100
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4809 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 0.62 Pf6N2E2_5423 Translation elongation factor LepA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_4623 Aminoglycoside phosphotransferase 0.62 Psyr_3954 GTP-binding protein LepA low > 86
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_4623 Aminoglycoside phosphotransferase 0.62 Psyr_3954 GTP-binding protein LepA low > 86
Pseudomonas stutzeri RCH2 0.25 Psest_3664 Predicted phosphotransferase related to Ser/Thr protein kinases 0.61 Psest_3095 GTP-binding protein LepA — —
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_14355 aminoglycoside phosphotransferase 0.62 AO356_17485 elongation factor 4 low > 104
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_07295 aminoglycoside phosphotransferase 0.62 AO353_04520 elongation factor 4 low > 101
Pseudomonas sp. S08-1 0.25 OH686_15060 Phosphotransferase 0.61 OH686_20065 elongation factor 4 low > 80
Dechlorosoma suillum PS 0.25 Dsui_1588 aminoglycoside phosphotransferase 0.62 Dsui_2457 GTP-binding protein LepA low > 51
Castellaniella sp019104865 MT123 0.25 ABCV34_RS09505 phosphotransferase 0.61 ABCV34_RS08335 translation elongation factor 4 — —
Pseudomonas sp. DMC3 0.25 GFF33 N-acetylmuramate/N-acetylglucosamine kinase 0.62 GFF1955 Elongation factor 4 — —
Pseudomonas sp. RS175 0.24 PFR28_04060 N-acetylmuramate/N-acetylglucosamine kinase 0.63 PFR28_03525 Elongation factor 4 — —
Acinetobacter baumannii LAC-4 0.24 RR41_RS12015 phosphotransferase 0.59 RR41_RS04835 translation elongation factor 4 — —
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_1204 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 0.61 PfGW456L13_4842 Translation elongation factor LepA low > 87
Pseudomonas fluorescens SBW25 0.24 PFLU_RS27445 phosphotransferase 0.62 PFLU_RS05250 elongation factor 4 low > 109
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS27445 phosphotransferase 0.62 PFLU_RS05250 elongation factor 4 low > 109
Pseudomonas sp. BP01 0.24 JOY50_RS18160 aminoglycoside phosphotransferase family protein 0.62 JOY50_RS14685 lepA translation elongation factor 4 low > 84
Marinobacter adhaerens HP15 0.24 HP15_3282 aminoglycoside phosphotransferase 0.60 HP15_781 GTP-binding protein LepA low > 73
Pseudomonas sp. SVBP6 0.23 COO64_RS22490 aminoglycoside phosphotransferase family protein 0.62 COO64_RS16545 lepA translation elongation factor 4 low > 93
Ralstonia solanacearum PSI07 0.23 RPSI07_RS21480 aminoglycoside phosphotransferase 0.62 RPSI07_RS18990 elongation factor 4 low > 81
Pseudomonas putida KT2440 0.23 PP_0405 conserved protein of unknown function 0.62 PP_1431 Elongation factor 4 — —
Pseudomonas simiae WCS417 0.23 PS417_25790 aminoglycoside phosphotransferase 0.62 PS417_05180 elongation factor 4 — —
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS11735 aminoglycoside phosphotransferase 0.60 RALBFv3_RS14470 elongation factor 4 low > 76
Acinetobacter radioresistens SK82 0.23 MPMX26_01212 N-acetylmuramate/N-acetylglucosamine kinase 0.59 MPMX26_02159 Elongation factor 4 low > 36
Ralstonia solanacearum UW163 0.23 UW163_RS01850 aminoglycoside phosphotransferase 0.60 UW163_RS11935 elongation factor 4 — —
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS07690 aminoglycoside phosphotransferase family protein 0.60 ABZR87_RS10190 translation elongation factor 4 low > 80
Ralstonia solanacearum GMI1000 0.22 RS_RS02560 aminoglycoside phosphotransferase 0.61 RS_RS05250 elongation factor 4 — —
Rhodanobacter denitrificans MT42 0.22 LRK55_RS02855 phosphotransferase 0.59 LRK55_RS16670 translation elongation factor 4 low > 63
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS03105 phosphotransferase 0.59 LRK54_RS16955 translation elongation factor 4 0.70 12
Pseudomonas segetis P6 0.22 MPMX49_00883 N-acetylmuramate/N-acetylglucosamine kinase 0.62 MPMX49_01405 Elongation factor 4 — —
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS02765 aminoglycoside phosphotransferase 0.62 RR42_RS14055 elongation factor 4 low > 128
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_05278 N-acetylmuramate/N-acetylglucosamine kinase 0.62 GEMAOFIL_01242 Elongation factor 4 low > 93
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_09975 Aminoglycoside phosphotransferase 0.59 OKGIIK_07885 Elongation factor 4 low > 53
Shewanella loihica PV-4 0.21 Shew_0883 aminoglycoside phosphotransferase (RefSeq) 0.62 Shew_1052 GTP-binding protein LepA (RefSeq) low > 60
Acidovorax sp. GW101-3H11 0.20 Ac3H11_4324 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 0.59 Ac3H11_1569 Translation elongation factor LepA low > 79
Shewanella oneidensis MR-1 0.20 SO3635 hypothetical phosphotransferase (NCBI ptt file) 0.64 SO1346 lepA GTP-binding protein LepA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.20 Shewana3_3205 aminoglycoside phosphotransferase (RefSeq) 0.64 Shewana3_3028 GTP-binding protein LepA (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS02110 phosphotransferase 0.63 QEN71_RS04600 translation elongation factor 4 0.42 46
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS03285 aminoglycoside phosphotransferase 0.64 BPHYT_RS14380 elongation factor 4 low > 109
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_0792 Predicted phosphotransferase related to Ser/Thr protein kinases 0.63 B158DRAFT_2184 GTP-binding protein LepA low > 40
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_04636 hypothetical protein 0.64 H281DRAFT_04360 GTP-binding protein LepA low > 103
Paraburkholderia graminis OAS925 0.19 ABIE53_000796 aminoglycoside/choline kinase family phosphotransferase 0.63 ABIE53_003038 GTP-binding protein LepA low > 113
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.1681.1 hypothetical protein 0.60 Xcc-8004.3676.1 Translation elongation factor LepA low > 74

Not shown: 0 genomes with orthologs for GFF4954 only; 65 genomes with orthologs for GFF3138 only