Conservation of cofitness between Psest_2079 and Psest_3178 in Pseudomonas stutzeri RCH2

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2079 Predicted permeases 1.0 Psest_3178 formyltetrahydrofolate deformylase 0.46 1
Pseudomonas sp. S08-1 0.72 OH686_03525 hypothetical protein 0.90 OH686_18295 formyltetrahydrofolate deformylase low > 80
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_2454 Protein of unknown function DUF81 0.86 Psyr_4018 Formyltetrahydrofolate deformylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_2454 Protein of unknown function DUF81 0.86 Psyr_4018 Formyltetrahydrofolate deformylase low > 86
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_1267 Membrane protein, putative 0.87 Pf6N2E2_5508 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 103
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_3242 Membrane protein, putative 0.87 PfGW456L13_1825 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_25900 hypothetical protein 0.87 AO356_17895 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_26530 hypothetical protein 0.87 AO353_03710 formyltetrahydrofolate deformylase low > 101
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_4779 Membrane protein, putative 0.87 Pf1N1B4_665 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas sp. RS175 0.68 PFR28_02189 putative membrane transporter protein YfcA 0.87 PFR28_03439 Formyltetrahydrofolate deformylase — —
Pseudomonas simiae WCS417 0.68 PS417_12880 membrane protein 0.86 PS417_22565 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS13560 TSUP family transporter 0.87 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS13560 TSUP family transporter 0.87 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_09295 hypothetical protein 0.37 CSW01_09940 formyltetrahydrofolate deformylase low > 62
Shewanella loihica PV-4 0.47 Shew_2484 hypothetical protein (RefSeq) 0.33 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) — —
Shewanella oneidensis MR-1 0.46 SO1818 conserved hypothetical protein (NCBI ptt file) 0.34 SO1624 purU formyltetrahydrofolate deformylase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.46 Sama_1248 hypothetical protein (RefSeq) 0.36 Sama_1134 purU formyltetrahydrofolate deformylase (RefSeq) low > 62
Shewanella sp. ANA-3 0.46 Shewana3_2631 hypothetical protein (RefSeq) 0.34 Shewana3_2821 purU formyltetrahydrofolate deformylase (RefSeq) low > 73
Azospirillum sp. SherDot2 0.34 MPMX19_00682 putative membrane transporter protein YfcA 0.48 MPMX19_04425 Formyltetrahydrofolate deformylase — —
Serratia liquefaciens MT49 0.33 IAI46_18015 TSUP family transporter 0.37 IAI46_14265 formyltetrahydrofolate deformylase low > 86
Lysobacter sp. OAE881 0.32 ABIE51_RS11860 TSUP family transporter 0.45 ABIE51_RS07700 formyltetrahydrofolate deformylase low > 62
Azospirillum brasilense Sp245 0.32 AZOBR_RS10405 membrane protein 0.47 AZOBR_RS21685 formyltetrahydrofolate deformylase — —
Dickeya dadantii 3937 0.32 DDA3937_RS14570 TSUP family transporter 0.38 DDA3937_RS10325 formyltetrahydrofolate deformylase low > 74
Klebsiella michiganensis M5al 0.31 BWI76_RS20425 hypothetical protein 0.38 BWI76_RS17290 formyltetrahydrofolate deformylase — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0277 Predicted permeases 0.38 EX28DRAFT_0858 formyltetrahydrofolate deformylase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1948 Putative membrane protein YfcA 0.38 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 78
Enterobacter sp. TBS_079 0.31 MPMX20_03262 putative membrane transporter protein YfcA 0.37 MPMX20_02596 Formyltetrahydrofolate deformylase low > 85
Rahnella sp. WP5 0.30 EX31_RS19675 TSUP family transporter 0.38 EX31_RS10115 formyltetrahydrofolate deformylase low > 89
Pantoea sp. MT58 0.30 IAI47_06160 TSUP family transporter 0.37 IAI47_09010 formyltetrahydrofolate deformylase low > 76
Agrobacterium fabrum C58 0.30 Atu1591 hypothetical protein 0.44 Atu4315 formyltetrahydrofolate deformylase low > 89
Pectobacterium carotovorum WPP14 0.29 HER17_RS06945 sulfite exporter TauE/SafE family protein 0.37 HER17_RS11065 formyltetrahydrofolate deformylase low > 75
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_4150 Predicted permeases 0.47 Ga0059261_1821 formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 68
Erwinia tracheiphila SCR3 0.29 LU632_RS07785 sulfite exporter TauE/SafE family protein 0.38 LU632_RS12940 purU formyltetrahydrofolate deformylase low > 74
Escherichia coli ECRC101 0.29 MCAODC_13665 yfcA putative membrane transporter protein YfcA 0.38 MCAODC_21690 purU formyltetrahydrofolate deformylase low > 87
Escherichia coli BL21 0.29 ECD_02252 TauE/TSUP family inner membrane protein 0.38 ECD_01208 formyltetrahydrofolate hydrolase low > 61
Escherichia coli ECRC98 0.29 JDDGAC_26585 yfcA putative membrane transporter protein YfcA 0.38 JDDGAC_06005 purU formyltetrahydrofolate deformylase low > 86
Escherichia coli ECOR27 0.29 NOLOHH_14260 yfcA putative membrane transporter protein YfcA 0.38 NOLOHH_20480 purU formyltetrahydrofolate deformylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_01378 putative membrane transporter protein YfcA 0.38 OHPLBJKB_02453 Formyltetrahydrofolate deformylase low > 73
Escherichia coli ECOR38 0.29 HEPCGN_21830 yfcA putative membrane transporter protein YfcA 0.38 HEPCGN_25030 purU formyltetrahydrofolate deformylase low > 87
Escherichia fergusonii Becca 0.29 EFB2_01531 putative membrane transporter protein YfcA 0.38 EFB2_02694 Formyltetrahydrofolate deformylase low > 86
Escherichia coli Nissle 1917 0.29 ECOLIN_RS13480 sulfite exporter TauE/SafE family protein 0.38 ECOLIN_RS07460 formyltetrahydrofolate deformylase — —
Escherichia coli ECRC102 0.29 NIAGMN_20400 yfcA putative membrane transporter protein YfcA 0.38 NIAGMN_27665 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC99 0.29 KEDOAH_05570 yfcA putative membrane transporter protein YfcA 0.38 KEDOAH_25565 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC100 0.29 OKFHMN_22625 yfcA putative membrane transporter protein YfcA 0.38 OKFHMN_28570 purU formyltetrahydrofolate deformylase low > 80
Escherichia coli ECRC62 0.29 BNILDI_13180 yfcA putative membrane transporter protein YfcA 0.38 BNILDI_18635 purU formyltetrahydrofolate deformylase low > 75
Escherichia coli BW25113 0.29 b2327 yfcA conserved inner membrane protein (NCBI) 0.38 b1232 purU formyltetrahydrofolate deformylase (NCBI) low > 76
Rhizobium sp. OAE497 0.28 ABIE40_RS11125 TSUP family transporter 0.44 ABIE40_RS00960 formyltetrahydrofolate deformylase low > 107
Dickeya dianthicola 67-19 0.28 HGI48_RS14520 TSUP family transporter 0.38 HGI48_RS10335 formyltetrahydrofolate deformylase low > 71
Dickeya dianthicola ME23 0.27 DZA65_RS15455 TSUP family transporter 0.38 DZA65_RS10810 formyltetrahydrofolate deformylase low > 75
Castellaniella sp019104865 MT123 0.26 ABCV34_RS12215 TSUP family transporter 0.44 ABCV34_RS00645 formyltetrahydrofolate deformylase low > 48
Acinetobacter radioresistens SK82 0.26 MPMX26_02777 putative membrane transporter protein YfcA 0.44 MPMX26_00378 Formyltetrahydrofolate deformylase low > 36
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS04180 TSUP family transporter 0.43 ABZR87_RS14235 formyltetrahydrofolate deformylase low > 80
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_00376 putative membrane spanning protein 0.48 CCNA_03745 formyltetrahydrofolate deformylase low > 67
Caulobacter crescentus NA1000 0.25 CCNA_00376 putative membrane spanning protein 0.48 CCNA_03745 formyltetrahydrofolate deformylase low > 66
Ralstonia solanacearum PSI07 0.24 RPSI07_RS08365 membrane protein 0.44 RPSI07_RS15065 formyltetrahydrofolate deformylase low > 81
Ralstonia solanacearum GMI1000 0.24 RS_RS16720 membrane protein 0.44 RS_RS09460 formyltetrahydrofolate deformylase low > 80
Pseudomonas putida KT2440 0.23 PP_0487 conserved membrane protein of unknown function 0.86 PP_1367 formyltetrahydrofolate hydrolase low > 96
Ralstonia solanacearum UW163 0.23 UW163_RS04705 membrane protein 0.44 UW163_RS11420 formyltetrahydrofolate deformylase — —
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS10460 hypothetical protein 0.35 CA265_RS21155 formyltetrahydrofolate deformylase low > 88
Dechlorosoma suillum PS 0.22 Dsui_3484 putative permease 0.66 Dsui_0762 formyltetrahydrofolate deformylase — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.5298.1 FIG011065: hypothetical protein 0.44 Xcc-8004.395.1 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 74
Acidovorax sp. GW101-3H11 0.20 Ac3H11_3324 FIG011065: hypothetical protein 0.45 Ac3H11_4485 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Variovorax sp. SCN45 0.20 GFF5022 FIG011065: hypothetical protein 0.44 GFF3790 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF1891 FIG011065: hypothetical protein 0.45 GFF2737 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 90
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS23970 membrane protein 0.40 HSERO_RS07970 formyltetrahydrofolate deformylase low > 78
Variovorax sp. OAS795 0.19 ABID97_RS04095 TSUP family transporter 0.45 ABID97_RS00100 formyltetrahydrofolate deformylase — —
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS20255 membrane protein 0.44 RR42_RS13800 formyltetrahydrofolate deformylase low > 128
Marinobacter adhaerens HP15 0.12 HP15_2204 membrane protein containing DUF81 0.61 HP15_1358 formyltetrahydrofolate deformylase low > 73

Not shown: 3 genomes with orthologs for Psest_2079 only; 23 genomes with orthologs for Psest_3178 only