Conservation of cofitness between HP15_2186 and HP15_2685 in Marinobacter adhaerens HP15

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2186 trigger factor 1.0 HP15_2685 UPF0271 protein, LamB/YcsF family 0.63 1
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1746 Trigger factor 0.41 Psyr_0497 LamB/YcsF low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1746 Trigger factor 0.41 Psyr_0497 LamB/YcsF low > 86
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_3944 Cell division trigger factor (EC 5.2.1.8) 0.51 Pf1N1B4_3366 Lactam utilization protein LamB — —
Pseudomonas stutzeri RCH2 0.55 Psest_2288 trigger factor 0.54 Psest_1542 Uncharacterized proteins, homologs of lactam utilization protein B low > 67
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_2551 Cell division trigger factor (EC 5.2.1.8) 0.52 PfGW456L13_4478 Lactam utilization protein LamB low > 87
Pseudomonas sp. S08-1 0.55 OH686_03650 trigger factor 0.48 OH686_08750 Lactam utilization protein LamB low > 80
Pseudomonas putida KT2440 0.55 PP_2299 Trigger factor 0.52 PP_4577 UPF0271 protein PP_4577 low > 96
Pseudomonas fluorescens SBW25 0.55 PFLU_RS19175 trigger factor 0.50 PFLU_RS07555 LamB/YcsF family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS19175 trigger factor 0.50 PFLU_RS07555 LamB/YcsF family protein low > 109
Pseudomonas simiae WCS417 0.54 PS417_17240 trigger factor 0.50 PS417_07470 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_2219 Cell division trigger factor (EC 5.2.1.8) 0.51 Pf6N2E2_2708 Lactam utilization protein LamB low > 103
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_01755 trigger factor 0.51 AO356_04335 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_20170 trigger factor 0.51 AO353_17995 hypothetical protein low > 101
Pseudomonas sp. RS175 0.52 PFR28_01227 Trigger factor 0.52 PFR28_00728 5-oxoprolinase subunit A 3 low > 88
Alteromonas macleodii MIT1002 0.51 MIT1002_02761 Trigger factor 0.48 MIT1002_02298 LamB/YcsF family protein low > 70
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_1033 trigger factor 0.30 B158DRAFT_1994 Uncharacterized proteins, homologs of lactam utilization protein B low > 40
Serratia liquefaciens MT49 0.49 IAI46_05005 trigger factor 0.31 IAI46_06225 5-oxoprolinase subunit PxpA low > 86
Pantoea sp. MT58 0.49 IAI47_14660 trigger factor 0.30 IAI47_13795 5-oxoprolinase subunit PxpA low > 76
Shewanella loihica PV-4 0.49 Shew_2509 tig trigger factor (RefSeq) 0.30 Shew_0006 LamB/YcsF family protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.48 MPMX20_01027 Trigger factor 0.31 MPMX20_01347 5-oxoprolinase subunit A low > 85
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_09620 trigger factor 0.49 CSW01_18055 hypothetical protein low > 62
Rahnella sp. WP5 0.48 EX31_RS22240 trigger factor 0.32 EX31_RS15535 LamB/YcsF family protein low > 89
Pectobacterium carotovorum WPP14 0.48 HER17_RS15855 trigger factor 0.31 HER17_RS14975 5-oxoprolinase subunit PxpA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_03237 Trigger factor 0.32 OHPLBJKB_03004 hypothetical protein low > 73
Escherichia coli ECRC99 0.48 KEDOAH_19625 tig trigger factor 0.32 KEDOAH_20970 pxpA 5-oxoprolinase subunit PxpA — —
Escherichia coli BW25113 0.48 b0436 tig trigger factor (NCBI) 0.31 b0713 ybgL hypothetical protein (NCBI) low > 76
Escherichia coli ECRC101 0.48 OKFHMN_08340 tig trigger factor 0.32 OKFHMN_06995 pxpA 5-oxoprolinase subunit PxpA — —
Escherichia coli ECOR38 0.48 HEPCGN_06955 tig trigger factor 0.32 HEPCGN_01215 pxpA 5-oxoprolinase subunit PxpA low > 85
Escherichia coli BL21 0.48 ECD_00387 peptidyl-prolyl cis/trans isomerase (trigger factor) 0.32 ECD_00673 UPF0271 family protein low > 60
Escherichia coli ECRC102 0.48 NIAGMN_06395 tig trigger factor 0.32 NIAGMN_05050 pxpA 5-oxoprolinase subunit PxpA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF4352 Cell division trigger factor (EC 5.2.1.8) 0.30 GFF4618 Lactam utilization protein LamB low > 78
Escherichia coli ECOR27 0.48 NOLOHH_01275 tig trigger factor 0.32 NOLOHH_23380 pxpA 5-oxoprolinase subunit PxpA low > 57
Escherichia coli Nissle 1917 0.48 ECOLIN_RS02620 trigger factor 0.32 ECOLIN_RS03815 5-oxoprolinase subunit PxpA low > 52
Escherichia coli ECRC101 0.48 MCAODC_27565 tig trigger factor 0.32 MCAODC_26215 pxpA 5-oxoprolinase subunit PxpA — —
Escherichia coli ECRC98 0.48 JDDGAC_11995 tig trigger factor 0.32 JDDGAC_10650 pxpA 5-oxoprolinase subunit PxpA — —
Escherichia fergusonii Becca 0.48 EFB2_03621 Trigger factor 0.32 EFB2_03390 5-oxoprolinase subunit A low > 86
Escherichia coli ECRC62 0.48 BNILDI_22690 tig trigger factor 0.32 BNILDI_21375 pxpA 5-oxoprolinase subunit PxpA — —
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2535 trigger factor 0.31 EX28DRAFT_2274 Uncharacterized proteins, homologs of lactam utilization protein B low > 76
Dickeya dadantii 3937 0.48 DDA3937_RS05635 trigger factor 0.32 DDA3937_RS08225 LamB/YcsF family protein low > 74
Klebsiella michiganensis M5al 0.48 BWI76_RS06520 trigger factor 0.30 BWI76_RS08360 LamB/YcsF family protein low > 92
Shewanella amazonensis SB2B 0.48 Sama_1223 tig trigger factor (RefSeq) 0.33 Sama_0021 hypothetical protein (RefSeq) low > 62
Dickeya dianthicola ME23 0.47 DZA65_RS06005 trigger factor 0.31 DZA65_RS19805 LamB/YcsF family protein low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS05680 trigger factor 0.32 HGI48_RS18670 LamB/YcsF family protein low > 71
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12920 trigger factor 0.33 HSERO_RS08780 LamB/YcsF family protein — —
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS21990 trigger factor 0.34 QEN71_RS40975 5-oxoprolinase subunit PxpA low > 153
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS09445 trigger factor 0.30 BPHYT_RS18635 LamB/YcsF family protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00895 trigger factor 0.31 H281DRAFT_05811 UPF0271 protein low > 103
Castellaniella sp019104865 MT123 0.37 ABCV34_RS05140 trigger factor 0.37 ABCV34_RS01510 5-oxoprolinase subunit PxpA — —
Variovorax sp. OAS795 0.36 ABID97_RS17605 trigger factor 0.39 ABID97_RS27395 5-oxoprolinase subunit PxpA low > 91
Variovorax sp. SCN45 0.36 GFF490 Cell division trigger factor (EC 5.2.1.8) 0.36 GFF3050 Lactam utilization protein LamB low > 127
Paraburkholderia graminis OAS925 0.36 ABIE53_002114 trigger factor 0.31 ABIE53_000049 UPF0271 protein low > 113
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS01355 trigger factor 0.34 RALBFv3_RS03425 LamB/YcsF family protein — —
Ralstonia solanacearum UW163 0.35 UW163_RS14665 trigger factor 0.34 UW163_RS10245 LamB/YcsF family protein — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS16120 trigger factor 0.35 RPSI07_RS02850 hypothetical protein low > 81
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS09015 trigger factor 0.35 RR42_RS00650 hypothetical protein low > 128
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS12800 trigger factor 0.34 ABZR87_RS15325 5-oxoprolinase subunit PxpA low > 80
Ralstonia solanacearum GMI1000 0.35 RS_RS08640 trigger factor 0.37 RS_RS21600 hypothetical protein low > 80
Lysobacter sp. OAE881 0.33 ABIE51_RS14160 trigger factor 0.29 ABIE51_RS08130 5-oxoprolinase subunit PxpA low > 62
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_08045 tig trigger factor 0.40 OKGIIK_04730 5-oxoprolinase subunit A low > 52
Magnetospirillum magneticum AMB-1 0.30 AMB_RS14050 trigger factor 0.35 AMB_RS15095 LamB/YcsF family protein — —
Rhodospirillum rubrum S1H 0.28 Rru_A1549 Trigger factor (NCBI) 0.34 Rru_A1504 LamB/YcsF (NCBI) low > 58
Azospirillum brasilense Sp245 0.27 AZOBR_RS07130 trigger factor 0.36 AZOBR_RS14715 hypothetical protein low > 97
Azospirillum sp. SherDot2 0.27 MPMX19_01549 Trigger factor 0.36 MPMX19_04959 5-oxoprolinase subunit A — —
Rhodopseudomonas palustris CGA009 0.26 TX73_015360 trigger factor 0.37 TX73_013895 LamB/YcsF family protein low > 86
Dinoroseobacter shibae DFL-12 0.26 Dshi_2190 trigger factor (RefSeq) 0.31 Dshi_2026 LamB/YcsF family protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.25 PGA1_c18160 trigger factor Tig 0.35 PGA1_c28700 LamB/YcsF family protein low > 62
Bosea sp. OAE506 0.25 ABIE41_RS18065 trigger factor 0.32 ABIE41_RS24170 5-oxoprolinase subunit PxpA low > 77
Agrobacterium fabrum C58 0.23 Atu1664 trigger factor 0.41 Atu3910 LamB/YcsF family protein — —
Fusobacterium nucleatum SB010 0.20 HUW76_01050 trigger factor 0.38 HUW76_07935 LamB/YcsF family protein low > 35
Pontibacter actiniarum KMM 6156, DSM 19842 0.11 CA264_01415 trigger factor 0.37 CA264_08790 LamB/YcsF family protein low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.08 Echvi_4633 trigger factor 0.32 Echvi_3010 Uncharacterized proteins, homologs of lactam utilization protein B low > 79

Not shown: 22 genomes with orthologs for HP15_2186 only; 2 genomes with orthologs for HP15_2685 only