Conservation of cofitness between Psest_3732 and Psest_2708 in Pseudomonas stutzeri RCH2

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3732 polyphosphate kinase 1 1.0 Psest_2708 transaldolase 0.39 1
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) 0.75 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) 0.31 35
Pseudomonas sp. RS175 0.85 PFR28_04345 Polyphosphate kinase 0.75 PFR28_01142 Transaldolase low > 88
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_0293 Polyphosphate kinase 0.74 Psyr_1914 transaldolase 0.40 85
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_0293 Polyphosphate kinase 0.74 Psyr_1914 transaldolase low > 86
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_12895 polyphosphate kinase 0.74 AO356_02175 transaldolase low > 104
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) 0.74 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.48 17
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS29095 polyphosphate kinase 1 0.77 PFLU_RS07805 transaldolase low > 109
Pseudomonas simiae WCS417 0.84 PS417_27435 polyphosphate kinase 0.77 PS417_07730 transaldolase — —
Pseudomonas fluorescens SBW25 0.84 PFLU_RS29095 polyphosphate kinase 1 0.77 PFLU_RS07805 transaldolase low > 109
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) 0.75 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_08885 polyphosphate kinase 0.78 AO353_00310 transaldolase 0.57 6
Pseudomonas putida KT2440 0.83 PP_5217 Polyphosphate kinase 0.75 PP_2168 Transaldolase 0.28 70
Pseudomonas sp. S08-1 0.82 OH686_13995 polyphosphate kinase 1 0.76 OH686_22740 transaldolase low > 80
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS07490 polyphosphate kinase 1 0.66 ABZR86_RS12545 transaldolase low > 74
Marinobacter adhaerens HP15 0.58 HP15_3334 polyphosphate kinase 0.57 HP15_2241 transaldolase low > 73
Acinetobacter radioresistens SK82 0.56 MPMX26_02335 Polyphosphate kinase 0.45 MPMX26_01753 Transaldolase 0.79 6
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS31480 polyphosphate kinase 0.55 RR42_RS13050 transaldolase low > 128
Lysobacter sp. OAE881 0.48 ABIE51_RS14230 polyphosphate kinase 1 0.63 ABIE51_RS02125 transaldolase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) 0.48 Xcc-8004.4226.1 Transaldolase (EC 2.2.1.2) low > 74
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS06305 polyphosphate kinase 0.59 HSERO_RS05500 transaldolase low > 78
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS04860 polyphosphate kinase 1 0.54 QEN71_RS24595 transaldolase low > 153
Paraburkholderia graminis OAS925 0.46 ABIE53_002988 polyphosphate kinase 0.55 ABIE53_001416 transaldolase low > 113
Castellaniella sp019104865 MT123 0.46 ABCV34_RS15580 polyphosphate kinase 1 0.53 ABCV34_RS15500 transaldolase low > 48
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS14110 polyphosphate kinase 0.54 BPHYT_RS06045 transaldolase low > 109
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS14065 polyphosphate kinase 1 0.59 ABZR87_RS11000 transaldolase 0.43 3
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04418 polyphosphate kinase 0.54 H281DRAFT_00286 transaldolase low > 103
Ralstonia solanacearum UW163 0.45 UW163_RS15425 polyphosphate kinase 1 0.56 UW163_RS12825 transaldolase — —
Ralstonia solanacearum PSI07 0.45 RPSI07_RS15330 polyphosphate kinase 1 0.57 RPSI07_RS18015 transaldolase low > 81
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS02115 polyphosphate kinase 1 0.56 RALBFv3_RS15360 transaldolase 0.78 70
Ralstonia solanacearum GMI1000 0.45 RS_RS07705 polyphosphate kinase 1 0.57 RS_RS06170 transaldolase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF4226 Polyphosphate kinase (EC 2.7.4.1) 0.57 GFF1363 Transaldolase (EC 2.2.1.2) low > 90
Acidovorax sp. GW101-3H11 0.40 Ac3H11_452 Polyphosphate kinase (EC 2.7.4.1) 0.57 Ac3H11_2059 Transaldolase (EC 2.2.1.2) low > 79
Variovorax sp. OAS795 0.40 ABID97_RS14575 polyphosphate kinase 1 0.55 ABID97_RS07095 transaldolase low > 91
Variovorax sp. SCN45 0.40 GFF1089 Polyphosphate kinase (EC 2.7.4.1) 0.56 GFF5266 Transaldolase (EC 2.2.1.2) low > 127
Rhodospirillum rubrum S1H 0.36 Rru_A2161 Polyphosphate kinase (NCBI) 0.52 Rru_A1357 Transaldolase AB (NCBI) low > 58
Bosea sp. OAE506 0.34 ABIE41_RS16125 RNA degradosome polyphosphate kinase 0.56 ABIE41_RS23900 transaldolase low > 77
Rhizobium sp. OAE497 0.33 ABIE40_RS06575 RNA degradosome polyphosphate kinase 0.60 ABIE40_RS16940 transaldolase — —
Agrobacterium fabrum C58 0.33 Atu1144 polyphosphate kinase 0.60 Atu4464 transaldolase B — —
Escherichia coli Nissle 1917 0.27 ECOLIN_RS14200 polyphosphate kinase 1 0.60 ECOLIN_RS00045 transaldolase low > 52
Escherichia fergusonii Becca 0.27 EFB2_01397 Polyphosphate kinase 0.60 EFB2_04035 Transaldolase B low > 86
Escherichia coli ECRC62 0.27 BNILDI_12260 ppk1 polyphosphate kinase 1 0.60 BNILDI_08195 transaldolase B — —
Escherichia coli BW25113 0.27 b2501 ppk polyphosphate kinase (NCBI) 0.60 b0008 talB transaldolase B (NCBI) low > 76
Escherichia coli ECRC98 0.27 JDDGAC_25745 ppk1 polyphosphate kinase 1 0.60 JDDGAC_14675 transaldolase B — —
Escherichia coli ECRC101 0.27 OKFHMN_21800 ppk1 polyphosphate kinase 1 0.60 OKFHMN_11080 transaldolase B — —
Escherichia coli BL21 0.27 ECD_02393 polyphosphate kinase, component of RNA degradosome 0.60 ECD_00008 transaldolase B low > 60
Escherichia coli ECOR27 0.27 NOLOHH_13450 ppk1 polyphosphate kinase 1 0.60 NOLOHH_03410 transaldolase B — —
Escherichia coli ECRC101 0.27 MCAODC_12330 ppk1 polyphosphate kinase 1 0.60 MCAODC_01595 transaldolase B — —
Escherichia coli ECRC99 0.27 KEDOAH_06420 ppk1 polyphosphate kinase 1 0.60 KEDOAH_17075 transaldolase B — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_01225 Polyphosphate kinase 0.60 OHPLBJKB_03652 Transaldolase low > 73
Escherichia coli ECOR38 0.27 HEPCGN_20965 ppk1 polyphosphate kinase 1 0.60 HEPCGN_09085 transaldolase B low > 85
Escherichia coli ECRC102 0.27 NIAGMN_19570 ppk1 polyphosphate kinase 1 0.60 NIAGMN_08930 transaldolase B — —
Pectobacterium carotovorum WPP14 0.26 HER17_RS06425 polyphosphate kinase 1 0.58 HER17_RS02815 transaldolase low > 75
Serratia liquefaciens MT49 0.26 IAI46_18915 polyphosphate kinase 1 0.58 IAI46_03055 transaldolase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF2167 Polyphosphate kinase (EC 2.7.4.1) 0.59 GFF1083 Transaldolase (EC 2.2.1.2) low > 78
Enterobacter sp. TBS_079 0.26 MPMX20_03356 Polyphosphate kinase 0.59 MPMX20_00716 Transaldolase B low > 85
Dickeya dadantii 3937 0.26 DDA3937_RS15150 polyphosphate kinase 1 0.58 DDA3937_RS18395 transaldolase low > 74
Pantoea sp. MT58 0.26 IAI47_05155 polyphosphate kinase 1 0.59 IAI47_16195 transaldolase low > 76
Klebsiella michiganensis M5al 0.26 BWI76_RS20995 RNA degradosome polyphosphate kinase 0.59 BWI76_RS04270 transaldolase low > 92
Enterobacter asburiae PDN3 0.26 EX28DRAFT_0166 polyphosphate kinase 1 0.59 EX28DRAFT_3620 transaldolase low > 76
Dickeya dianthicola 67-19 0.26 HGI48_RS15225 polyphosphate kinase 1 0.58 HGI48_RS18325 transaldolase low > 71
Dickeya dianthicola ME23 0.26 DZA65_RS16045 polyphosphate kinase 1 0.58 DZA65_RS19465 transaldolase low > 75
Rahnella sp. WP5 0.26 EX31_RS22680 polyphosphate kinase 1 0.57 EX31_RS03920 transaldolase low > 89
Erwinia tracheiphila SCR3 0.25 LU632_RS08260 ppk1 polyphosphate kinase 1 0.57 LU632_RS02630 tal transaldolase low > 74
Alteromonas macleodii MIT1002 0.25 MIT1002_00872 Polyphosphate kinase 0.63 MIT1002_03080 Transaldolase B — —
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_03780 polyphosphate kinase 1 0.60 CSW01_17325 transaldolase low > 62
Shewanella amazonensis SB2B 0.24 Sama_2011 polyphosphate kinase (RefSeq) 0.61 Sama_0913 transaldolase B (RefSeq) — —
Shewanella loihica PV-4 0.24 Shew_3079 polyphosphate kinase (RefSeq) 0.59 Shew_1089 transaldolase B (RefSeq) — —
Shewanella sp. ANA-3 0.23 Shewana3_2417 polyphosphate kinase (RefSeq) 0.58 Shewana3_3147 transaldolase B (RefSeq) — —

Not shown: 28 genomes with orthologs for Psest_3732 only; 1 genomes with orthologs for Psest_2708 only