| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_2240 | | tRNA-dihydrouridine synthase, TIM-barrel, YjbN | 1.0 | HP15_2116 | | PP-loop domain protein | 0.34 | 7 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_1936 | | tRNA-U16,U17-dihydrouridine synthase | 0.63 | Psyr_3705 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_1936 | | tRNA-U16,U17-dihydrouridine synthase | 0.63 | Psyr_3705 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas putida KT2440 | 0.59 | PP_2169 | | tRNA-dihydrouridine synthase A | 0.63 | PP_1641 | | tRNA 2-thiocytidine biosynthesis protein TtcA | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_2706 | | tRNA dihydrouridine synthase A | 0.65 | Psest_3033 | | Predicted ATPase of the PP-loop superfamily implicated in cell cycle control | low | > 67 |
| Pseudomonas fluorescens FW300-N2E2 | 0.57 | Pf6N2E2_2257 | | tRNA dihydrouridine synthase A | 0.63 | Pf6N2E2_5711 | | tRNA(Cytosine32)-2-thiocytidine synthetase | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.57 | AO356_02170 | | tRNA-dihydrouridine synthase A | 0.62 | AO356_19000 | | tRNA 2-thiocytidine biosynthesis protein TtcA | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_57 | | tRNA dihydrouridine synthase A | 0.63 | Pf1N1B4_3491 | | tRNA(Cytosine32)-2-thiocytidine synthetase | low | > 87 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_01143 | | tRNA-dihydrouridine(20/20a) synthase | 0.63 | PFR28_03236 | | tRNA-cytidine(32) 2-sulfurtransferase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS07810 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.62 | PFLU_RS18455 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS07810 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.62 | PFLU_RS18455 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_00295 | | tRNA-dihydrouridine synthase A | 0.63 | AO353_02780 | | tRNA 2-thiocytidine biosynthesis protein TtcA | low | > 101 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_22745 | | tRNA-dihydrouridine(20/20a) synthase | 0.64 | OH686_05145 | | tRNA-(cytosine32)-2-thiocytidine synthetase TtcA | low | > 80 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_07740 | | tRNA-dihydrouridine synthase A | 0.63 | PS417_16415 | | tRNA 2-thiocytidine biosynthesis protein TtcA | low | > 88 |
| Rahnella sp. WP5 | 0.56 | EX31_RS11865 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | EX31_RS06375 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_01985 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | CSW01_07180 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 62 |
| Shewanella loihica PV-4 | 0.55 | Shew_0536 | | tRNA-dihydrouridine synthase A (RefSeq) | 0.64 | Shew_1995 | | PP-loop domain-containing protein (RefSeq) | low | > 60 |
| Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_4263 | | tRNA dihydrouridine synthase A | 0.65 | EX28DRAFT_1007 | | Predicted ATPase of the PP-loop superfamily implicated in cell cycle control | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.54 | GFF1418 | | tRNA dihydrouridine synthase A (EC 1.-.-.-) | 0.65 | GFF2648 | | tRNA(Cytosine32)-2-thiocytidine synthetase | low | > 78 |
| Klebsiella michiganensis M5al | 0.54 | BWI76_RS01900 | | tRNA-dihydrouridine synthase A | 0.65 | BWI76_RS12710 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 92 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_00265 | | tRNA-dihydrouridine(20/20a) synthase | 0.64 | MPMX20_02440 | | tRNA-cytidine(32) 2-sulfurtransferase | low | > 85 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_11560 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | HEPCGN_26005 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 87 |
| Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS23355 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | ECOLIN_RS08065 | | tRNA 2-thiocytidine(32) synthetase TtcA | — | — |
| Escherichia coli BW25113 | 0.54 | b4049 | dusA | tRNA-dihydrouridine synthase A (RefSeq) | 0.65 | b1344 | ydaO | predicted C32 tRNA thiolase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_10790 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | NIAGMN_26325 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | — | — |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_05195 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | NOLOHH_19870 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 75 |
| Escherichia fergusonii Becca | 0.54 | EFB2_04556 | | tRNA-dihydrouridine(20/20a) synthase | 0.65 | EFB2_02583 | | tRNA-cytidine(32) 2-sulfurtransferase | low | > 86 |
| Escherichia coli ECRC62 | 0.54 | BNILDI_06330 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | BNILDI_18020 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 75 |
| Escherichia coli BL21 | 0.54 | ECD_03921 | | tRNA-dihydrouridine synthase A | 0.65 | ECD_01321 | | tRNA s(2)C32 thioltransferase, iron sulfur cluster protein | low | > 61 |
| Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_3987 | | tRNA dihydrouridine synthase A | 0.62 | PfGW456L13_2020 | | tRNA(Cytosine32)-2-thiocytidine synthetase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_03994 | | tRNA-dihydrouridine(20/20a) synthase | 0.65 | OHPLBJKB_02337 | | tRNA-cytidine(32) 2-sulfurtransferase | low | > 73 |
| Escherichia coli ECRC100 | 0.54 | OKFHMN_12945 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | OKFHMN_02155 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | — | — |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_16580 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | JDDGAC_04715 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 86 |
| Escherichia coli ECRC99 | 0.54 | KEDOAH_15205 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | KEDOAH_26600 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | — | — |
| Shewanella amazonensis SB2B | 0.54 | Sama_3055 | | tRNA-dihydrouridine synthase A (RefSeq) | 0.66 | Sama_1801 | | hypothetical protein (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.53 | Shewana3_0718 | | tRNA-dihydrouridine synthase A (RefSeq) | 0.66 | Shewana3_2117 | | PP-loop domain-containing protein (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.53 | SO3912 | | TIM-barrel protein, yjbN family (NCBI ptt file) | 0.65 | SO2354 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.53 | HER17_RS03680 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | HER17_RS09605 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 75 |
| Escherichia coli ECRC101 | 0.53 | MCAODC_03455 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | MCAODC_16100 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 87 |
| Pantoea sp. MT58 | 0.53 | IAI47_17865 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.66 | IAI47_09475 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 76 |
| Kangiella aquimarina DSM 16071 | 0.53 | B158DRAFT_2018 | | tRNA dihydrouridine synthase A | 0.66 | B158DRAFT_2154 | | tRNA s(2)C-32 sulfurtransferase (EC 2.8.1.4) | 0.29 | 17 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_22970 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | IAI46_13420 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 86 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS17480 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | DDA3937_RS12330 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.52 | HSERO_RS17905 | | tRNA-dihydrouridine synthase A | 0.56 | HSERO_RS22035 | | tRNA 2-thiocytidine biosynthesis protein TtcA | low | > 78 |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS17540 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.65 | HGI48_RS12410 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 71 |
| Dickeya dianthicola ME23 | 0.52 | DZA65_RS18620 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.66 | DZA65_RS12850 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.52 | QEN71_RS22650 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.60 | QEN71_RS28595 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 153 |
| Erwinia tracheiphila SCR3 | 0.50 | LU632_RS23765 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.62 | LU632_RS12165 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_00482 | | tRNA-dihydrouridine(20/20a) synthase | 0.57 | MPMX26_00810 | | tRNA-cytidine(32) 2-sulfurtransferase | low | > 36 |
| Lysobacter sp. OAE881 | 0.50 | ABIE51_RS03925 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.59 | ABIE51_RS01305 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 62 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_00766 | | tRNA-U16,U17-dihydrouridine synthase | 0.59 | H281DRAFT_05824 | | tRNA s(2)C-32 sulfurtransferase | low | > 103 |
| Variovorax sp. OAS795 | 0.49 | ABID97_RS13915 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.60 | ABID97_RS06505 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 91 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_001975 | | tRNA-dihydrouridine synthase A | 0.60 | ABIE53_000036 | | tRNA 2-thiocytidine biosynthesis protein TtcA | low | > 113 |
| Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS18350 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.62 | ABZR86_RS16485 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 74 |
| Variovorax sp. SCN45 | 0.48 | GFF928 | | tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) | 0.60 | GFF7310 | | tRNA-(cytosine32)-2-thiocytidine synthetase TtcA | low | > 127 |
| Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS05750 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.57 | LRK55_RS10320 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.47 | LRK54_RS05995 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.56 | LRK54_RS10680 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 59 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.46 | GFF4791 | | tRNA dihydrouridine synthase A | 0.57 | GFF1658 | | tRNA(Cytosine32)-2-thiocytidine synthetase | 0.49 | 70 |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_00625 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.54 | OKGIIK_13200 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 52 |
| Rhizobium sp. OAE497 | 0.46 | ABIE40_RS10895 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.44 | ABIE40_RS10230 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 107 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.46 | Xcc-8004.5010.1 | | tRNA dihydrouridine synthase A | 0.55 | Xcc-8004.5211.1 | | tRNA(Cytosine32)-2-thiocytidine synthetase | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_03387 | | putative tRNA-dihydrouridine synthase | 0.64 | MIT1002_02139 | | tRNA 2-thiocytidine biosynthesis protein TtcA | low | > 70 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_2288 | | tRNA dihydrouridine synthase A | 0.60 | Ac3H11_1817 | | tRNA(Cytosine32)-2-thiocytidine synthetase | low | > 79 |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_2512 | | TIM-barrel protein, yjbN family (RefSeq) | 0.44 | Dshi_0330 | | PP-loop domain protein (RefSeq) | low | > 64 |
| Agrobacterium fabrum C58 | 0.43 | Atu1515 | | hypothetical protein | 0.43 | Atu1858 | | hypothetical protein | low | > 89 |
| Phaeobacter inhibens DSM 17395 | 0.43 | PGA1_c19230 | | tRNA-dihydrouridine synthase A | 0.43 | PGA1_c02110 | | tRNA 2-thiocytidine biosynthesis protein TtcA | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.40 | ABCV34_RS04335 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.55 | ABCV34_RS10450 | | tRNA 2-thiocytidine(32) synthetase TtcA | low | > 48 |
| Sinorhizobium meliloti 1021 | 0.39 | SMc04235 | | tRNA-dihydrouridine synthase A | 0.45 | SMc00534 | | C32 tRNA thiolase | low | > 103 |