Conservation of cofitness between GFF517 and GFF2106 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF517 Oligopeptidase A (EC 3.4.24.70) 1.0 GFF2106 L-aspartate oxidase (EC 1.4.3.16) 0.52 14
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_00205 Oligopeptidase A 0.91 OHPLBJKB_01133 L-aspartate oxidase low > 73
Escherichia coli ECOR38 0.94 HEPCGN_15325 prlC oligopeptidase A 0.91 HEPCGN_20515 nadB L-aspartate oxidase low > 85
Escherichia coli BW25113 0.94 b3498 prlC oligopeptidase A (NCBI) 0.91 b2574 nadB L-aspartate oxidase (NCBI) low > 76
Escherichia fergusonii Becca 0.94 EFB2_00317 Oligopeptidase A 0.90 EFB2_01322 L-aspartate oxidase low > 86
Escherichia coli ECRC101 0.94 OKFHMN_16415 prlC oligopeptidase A 0.90 OKFHMN_21370 nadB L-aspartate oxidase — —
Escherichia coli ECRC99 0.94 KEDOAH_11730 prlC oligopeptidase A 0.90 KEDOAH_06850 nadB L-aspartate oxidase — —
Escherichia coli ECRC101 0.94 MCAODC_06930 prlC oligopeptidase A 0.90 MCAODC_11900 nadB L-aspartate oxidase — —
Escherichia coli ECRC98 0.94 JDDGAC_20045 prlC oligopeptidase A 0.90 JDDGAC_25035 nadB L-aspartate oxidase — —
Escherichia coli ECRC102 0.94 NIAGMN_14180 prlC oligopeptidase A 0.90 NIAGMN_19140 nadB L-aspartate oxidase — —
Escherichia coli Nissle 1917 0.94 ECOLIN_RS19985 oligopeptidase A 0.90 ECOLIN_RS14570 L-aspartate oxidase low > 52
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.89 EX28DRAFT_0071 L-aspartate oxidase (EC 1.4.3.16) low > 76
Escherichia coli ECRC62 0.93 BNILDI_03210 prlC oligopeptidase A 0.91 BNILDI_11845 nadB L-aspartate oxidase — —
Escherichia coli ECOR27 0.93 NOLOHH_08350 prlC oligopeptidase A 0.91 NOLOHH_13045 nadB L-aspartate oxidase low > 57
Escherichia coli BL21 0.93 ECD_03347 oligopeptidase A 0.90 ECD_02468 quinolinate synthase, L-aspartate oxidase (B protein) subunit low > 60
Enterobacter sp. TBS_079 0.93 MPMX20_04397 Oligopeptidase A 0.89 MPMX20_03445 L-aspartate oxidase low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26610 oligopeptidase A 0.87 BWI76_RS21360 L-aspartate oxidase low > 92
Pantoea sp. MT58 0.87 IAI47_01345 oligopeptidase A 0.80 IAI47_04845 L-aspartate oxidase low > 76
Pectobacterium carotovorum WPP14 0.85 HER17_RS21300 oligopeptidase A 0.81 HER17_RS05775 L-aspartate oxidase low > 75
Dickeya dianthicola ME23 0.83 DZA65_RS00035 oligopeptidase A 0.79 DZA65_RS16935 L-aspartate oxidase low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS21265 oligopeptidase A 0.80 DDA3937_RS15770 L-aspartate oxidase low > 74
Serratia liquefaciens MT49 0.83 IAI46_24210 oligopeptidase A 0.81 IAI46_19590 L-aspartate oxidase low > 86
Dickeya dianthicola 67-19 0.82 HGI48_RS00045 oligopeptidase A 0.80 HGI48_RS15855 L-aspartate oxidase low > 71
Rahnella sp. WP5 0.82 EX31_RS05165 oligopeptidase A 0.79 EX31_RS21795 L-aspartate oxidase low > 89
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_01010 oligopeptidase A 0.75 CSW01_12495 L-aspartate oxidase low > 62
Shewanella loihica PV-4 0.67 Shew_3657 oligopeptidase A (RefSeq) 0.72 Shew_1047 L-aspartate oxidase (RefSeq) — —
Shewanella oneidensis MR-1 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.71 SO1341 nadB L-aspartate oxidase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_3546 oligopeptidase A (RefSeq) 0.73 Sama_0873 L-aspartate oxidase (RefSeq) — —
Shewanella sp. ANA-3 0.65 Shewana3_4051 oligopeptidase A (RefSeq) 0.72 Shewana3_3033 L-aspartate oxidase (RefSeq) — —
Alteromonas macleodii MIT1002 0.64 MIT1002_03633 Oligopeptidase A 0.67 MIT1002_02720 L-aspartate oxidase — —
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases 0.65 B158DRAFT_2179 L-aspartate oxidase (EC 1.4.3.16) low > 40
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.62 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.62 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas sp. RS175 0.57 PFR28_04699 Oligopeptidase A 0.62 PFR28_00689 L-aspartate oxidase low > 88
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.60 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) low > 103
Marinobacter adhaerens HP15 0.57 HP15_3759 oligopeptidase A-like protein 0.59 HP15_774 L-aspartate oxidase low > 73
Pseudomonas putida KT2440 0.57 PP_0096 oligopeptidase A 0.63 PP_1426 L-aspartate oxidase low > 96
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_11120 oligopeptidase A 0.62 AO356_04580 L-aspartate oxidase low > 104
Pseudomonas simiae WCS417 0.57 PS417_00245 oligopeptidase A 0.62 PS417_07115 L-aspartate oxidase low > 88
Pseudomonas fluorescens SBW25 0.57 PFLU_RS00240 oligopeptidase A 0.62 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas stutzeri RCH2 0.57 Psest_4320 Zn-dependent oligopeptidases 0.63 Psest_3101 L-aspartate oxidase low > 67
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS00240 oligopeptidase A 0.62 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.62 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) low > 87
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.61 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) low > 87
Pseudomonas sp. S08-1 0.56 OH686_12360 Oligopeptidase A 0.62 OH686_20040 L-aspartate oxidase low > 80
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10775 oligopeptidase A 0.62 AO353_17620 L-aspartate oxidase low > 101
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_15380 dcp oligopeptidase A 0.18 OKGIIK_00935 L-aspartate oxidase low > 52
Dechlorosoma suillum PS 0.49 Dsui_0046 Zn-dependent oligopeptidase 0.57 Dsui_2452 L-aspartate oxidase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS05695 M3 family metallopeptidase 0.58 QEN71_RS03070 L-aspartate oxidase low > 153
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS07290 oligopeptidase A 0.57 HSERO_RS11085 L-aspartate oxidase low > 78
Paraburkholderia graminis OAS925 0.48 ABIE53_002798 oligopeptidase A 0.58 ABIE53_003292 L-aspartate oxidase low > 113
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12875 oligopeptidase A 0.58 BPHYT_RS15640 L-aspartate oxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A 0.58 H281DRAFT_04069 L-aspartate oxidase 0.44 60
Ralstonia solanacearum GMI1000 0.47 RS_RS08035 oligopeptidase A 0.58 RS_RS12285 L-aspartate oxidase low > 80
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.59 RR42_RS17010 L-aspartate oxidase low > 128
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.58 UW163_RS08945 L-aspartate oxidase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.58 RALBFv3_RS04725 L-aspartate oxidase low > 76
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13490 M3 family metallopeptidase 0.58 ABZR87_RS00345 L-aspartate oxidase low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS15795 oligopeptidase A 0.58 RPSI07_RS12660 L-aspartate oxidase low > 81
Acinetobacter radioresistens SK82 0.46 MPMX26_02685 Oligopeptidase A 0.59 MPMX26_02162 L-aspartate oxidase low > 36
Variovorax sp. OAS795 0.45 ABID97_RS14080 M3 family metallopeptidase 0.53 ABID97_RS07440 L-aspartate oxidase low > 91
Variovorax sp. SCN45 0.45 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.55 GFF2580 L-aspartate oxidase (EC 1.4.3.16) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.55 GFF1214 L-aspartate oxidase (EC 1.4.3.16) low > 90
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.54 Ac3H11_3824 L-aspartate oxidase (EC 1.4.3.16) low > 79
Castellaniella sp019104865 MT123 0.43 ABCV34_RS04180 M3 family metallopeptidase 0.52 ABCV34_RS03690 L-aspartate oxidase — —
Bacteroides stercoris CC31F 0.34 HMPREF1181_RS06150 M3 family metallopeptidase 0.41 HMPREF1181_RS01800 L-aspartate oxidase — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_05095 peptidase family M3 0.41 BACOVA_02888 L-aspartate oxidase low > 94
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS13165 M3 family metallopeptidase 0.41 ABI39_RS05945 L-aspartate oxidase — —
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS17165 M3 family metallopeptidase 0.42 HMPREF1058_RS11085 L-aspartate oxidase — —
Bacteroides thetaiotaomicron VPI-5482 0.33 BT4262 peptidyl-dipeptidase (NCBI ptt file) 0.41 BT3184 L-aspartate oxidase (NCBI ptt file) low > 81

Not shown: 6 genomes with orthologs for GFF517 only; 22 genomes with orthologs for GFF2106 only