| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0175 | | Xaa-Pro aminopeptidase | 1.0 | Psest_2027 | | ATP-dependent Clp protease ATP-binding subunit clpA | 0.36 | 16 |
| Pseudomonas sp. S08-1 | 0.93 | OH686_11205 | | Xaa-Pro aminopeptidase | 0.92 | OH686_00235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.73 | 31 |
| Pseudomonas fluorescens FW300-N1B4 | 0.85 | Pf1N1B4_2229 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.91 | Pf1N1B4_4055 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Pseudomonas putida KT2440 | 0.85 | PP_5200 | | proline aminopeptidase P II | 0.92 | PP_4008 | | ATP-dependent serine protease | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.83 | Pf6N2E2_4480 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.91 | Pf6N2E2_292 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 103 |
| Pseudomonas simiae WCS417 | 0.83 | PS417_27285 | | Xaa-Pro aminopeptidase | 0.92 | PS417_16510 | | Clp protease ClpX | 0.21 | 49 |
| Pseudomonas fluorescens FW300-N2E3 | 0.83 | AO353_08760 | | Xaa-Pro aminopeptidase | 0.91 | AO353_27675 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.83 | Psyr_0321 | | aminopeptidase P, Metallo peptidase, MEROPS family M24B | 0.91 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.83 | Psyr_0321 | | aminopeptidase P, Metallo peptidase, MEROPS family M24B | 0.91 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.83 | PFLU_RS28945 | | Xaa-Pro aminopeptidase | 0.91 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.83 | PFLU_RS28945 | | Xaa-Pro aminopeptidase | 0.91 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas sp. RS175 | 0.83 | PFR28_04321 | | Xaa-Pro aminopeptidase | 0.92 | PFR28_02613 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.83 | AO356_13010 | | Xaa-Pro aminopeptidase | 0.91 | AO356_22150 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.83 | PfGW456L13_896 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.92 | PfGW456L13_2646 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Marinobacter adhaerens HP15 | 0.68 | HP15_3203 | | proline aminopeptidase P II | 0.79 | HP15_2080 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.54 | 11 |
| Kangiella aquimarina DSM 16071 | 0.56 | B158DRAFT_0533 | | Xaa-Pro aminopeptidase | 0.69 | B158DRAFT_1505 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | 0.96 | 2 |
| Dyella japonica UNC79MFTsu3.2 | 0.55 | ABZR86_RS11970 | | aminopeptidase P N-terminal domain-containing protein | 0.69 | ABZR86_RS02200 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.71 | 4 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.54 | Xcc-8004.1147.1 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.66 | Xcc-8004.2754.1 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.54 | LRK55_RS11420 | | aminopeptidase P N-terminal domain-containing protein | 0.68 | LRK55_RS00160 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.54 | LRK54_RS11695 | | aminopeptidase P N-terminal domain-containing protein | 0.68 | LRK54_RS00420 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.49 | 17 |
| Lysobacter sp. OAE881 | 0.54 | ABIE51_RS17320 | | aminopeptidase P N-terminal domain-containing protein | 0.67 | ABIE51_RS11490 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.53 | OKGIIK_12200 | pepP | Xaa-Pro aminopeptidase | 0.68 | OKGIIK_06890 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 52 |
| Acinetobacter radioresistens SK82 | 0.52 | MPMX26_02286 | | Xaa-Pro aminopeptidase | 0.64 | MPMX26_01284 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 36 |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS03510 | | proline aminopeptidase P II | 0.64 | HSERO_RS07030 | | ATP-dependent Clp protease ATP-binding protein | — | — |
| Klebsiella michiganensis M5al | 0.48 | BWI76_RS23895 | | Xaa-Pro aminopeptidase | 0.66 | BWI76_RS09615 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 92 |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS02745 | | Xaa-Pro aminopeptidase | 0.64 | RR42_RS17105 | | Clp protease ClpX | low | > 128 |
| Dickeya dadantii 3937 | 0.48 | DDA3937_RS02395 | | Xaa-Pro aminopeptidase | 0.67 | DDA3937_RS09560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Escherichia fergusonii Becca | 0.48 | EFB2_00994 | | Xaa-Pro aminopeptidase | 0.66 | EFB2_03179 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Escherichia coli Nissle 1917 | 0.48 | ECOLIN_RS16190 | | Xaa-Pro aminopeptidase | 0.66 | ECOLIN_RS04695 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 52 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS02455 | | Xaa-Pro aminopeptidase | 0.66 | DZA65_RS09885 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Escherichia coli ECRC62 | 0.47 | BNILDI_09950 | pepP | Xaa-Pro aminopeptidase | 0.66 | BNILDI_20435 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli BL21 | 0.47 | ECD_02740 | | proline aminopeptidase P II | 0.66 | ECD_00887 | | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity | low | > 60 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_20875 | | Xaa-Pro aminopeptidase | 0.66 | IAI46_08515 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_18795 | pepP | Xaa-Pro aminopeptidase | 0.66 | HEPCGN_22900 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_00807 | | Xaa-Pro aminopeptidase | 0.66 | OHPLBJKB_02786 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 73 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS02350 | | Xaa-Pro aminopeptidase | 0.67 | HGI48_RS09575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 71 |
| Escherichia coli ECOR27 | 0.47 | NOLOHH_11415 | pepP | Xaa-Pro aminopeptidase | 0.66 | NOLOHH_22180 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 57 |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_17270 | pepP | Xaa-Pro aminopeptidase | 0.66 | NIAGMN_03825 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_23145 | pepP | Xaa-Pro aminopeptidase | 0.66 | JDDGAC_09420 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_08635 | pepP | Xaa-Pro aminopeptidase | 0.66 | KEDOAH_22125 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC101 | 0.47 | OKFHMN_19505 | pepP | Xaa-Pro aminopeptidase | 0.66 | OKFHMN_05785 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC101 | 0.47 | MCAODC_10025 | pepP | Xaa-Pro aminopeptidase | 0.66 | MCAODC_25000 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF3009 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.66 | GFF4901 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 78 |
| Escherichia coli BW25113 | 0.47 | b2908 | pepP | proline aminopeptidase P II (NCBI) | 0.66 | b0882 | clpA | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS19115 | | Xaa-Pro aminopeptidase | 0.67 | HER17_RS12400 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Enterobacter asburiae PDN3 | 0.47 | EX28DRAFT_2960 | | Xaa-Pro aminopeptidase | 0.67 | EX28DRAFT_2050 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | low | > 76 |
| Pantoea sp. MT58 | 0.47 | IAI47_03750 | | Xaa-Pro aminopeptidase | 0.66 | IAI47_12945 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS21505 | | Xaa-Pro aminopeptidase | 0.64 | RPSI07_RS12575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Enterobacter sp. TBS_079 | 0.46 | MPMX20_03767 | | Xaa-Pro aminopeptidase | 0.66 | MPMX20_01544 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 85 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS02535 | | Xaa-Pro aminopeptidase | 0.65 | RS_RS12370 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS07665 | | aminopeptidase P N-terminal domain-containing protein | 0.65 | ABZR87_RS00435 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.40 | 52 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS01875 | | Xaa-Pro aminopeptidase | 0.64 | UW163_RS08860 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS11710 | | Xaa-Pro aminopeptidase | 0.64 | RALBFv3_RS04810 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_04247 | | aminopeptidase P Metallo peptidase. MEROPS family M24B | 0.65 | H281DRAFT_04082 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 103 |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_02984 | | Xaa-Pro aminopeptidase | 0.67 | MIT1002_01834 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 70 |
| Erwinia tracheiphila SCR3 | 0.46 | LU632_RS05880 | pepP | Xaa-Pro aminopeptidase | 0.64 | LU632_RS09705 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Rahnella sp. WP5 | 0.45 | EX31_RS21495 | | Xaa-Pro aminopeptidase | 0.65 | EX31_RS18560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 89 |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS16575 | | Xaa-Pro aminopeptidase | 0.65 | BPHYT_RS15710 | | ATP-dependent Clp protease ATP-binding protein | low | > 109 |
| Dechlorosoma suillum PS | 0.45 | Dsui_1591 | | Xaa-Pro aminopeptidase | 0.66 | Dsui_0009 | | ATP-dependent Clp protease ATP-binding subunit clpA | 0.74 | 12 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS02460 | | aminopeptidase P N-terminal domain-containing protein | 0.63 | ABID97_RS16910 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 91 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS26760 | | aminopeptidase P N-terminal domain-containing protein | 0.65 | QEN71_RS03005 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 153 |
| Variovorax sp. SCN45 | 0.44 | GFF7179 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.64 | GFF341 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_652 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.64 | Ac3H11_2456 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.38 | 8 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF2485 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.64 | GFF4521 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 90 |
| Shewanella amazonensis SB2B | 0.39 | Sama_1534 | | xaa-pro aminopeptidase (RefSeq) | 0.70 | Sama_2056 | | ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.39 | Shew_2358 | | peptidase M24 (RefSeq) | 0.69 | Shew_1566 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 60 |
| Phocaeicola dorei CL03T12C01 | 0.17 | ABI39_RS04225 | | aminopeptidase P family protein | 0.40 | ABI39_RS03345 | | AAA family ATPase | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.16 | HMPREF1058_RS14845 | | aminopeptidase P family protein | 0.40 | HMPREF1058_RS09040 | | AAA family ATPase | low | > 67 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.10 | DVU0296 | | peptidase, M24 family (TIGR) | 0.52 | DVU1602 | clpA | ATP-dependent Clp protease, ATP-binding subunit ClpA (TIGR) | low | > 55 |
Not shown: 12 genomes with orthologs for Psest_0175 only; 20 genomes with orthologs for Psest_2027 only