Conservation of cofitness between HP15_2411 and HP15_1604 in Marinobacter adhaerens HP15

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2411 type IV pilus prepilin peptidase PilD 1.0 HP15_1604 general secretion pathway protein G 0.73 6
Acinetobacter radioresistens SK82 0.51 MPMX26_00244 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.46 MPMX26_00284 Type II secretion system protein G low > 36
Pseudomonas putida KT2440 0.49 PP_0632 leader peptidase/N-methyltransferase 0.54 PP_1049 putative protein secretion protein for export low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A 0.30 Psyr_3149 General secretion pathway protein G low > 86
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A 0.30 Psyr_3149 General secretion pathway protein G low > 86
Pseudomonas sp. S08-1 0.48 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase 0.63 OH686_11775 type II secretion system protein G
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.50 PfGW456L13_263 General secretion pathway protein G low > 87
Pseudomonas simiae WCS417 0.48 PS417_03895 methyltransferase 0.46 PS417_11275 general secretion pathway protein GspG low > 88
Pseudomonas fluorescens SBW25 0.48 PFLU_RS03940 prepilin peptidase 0.46 PFLU_RS11870 type II secretion system protein GspG low > 109
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS03940 prepilin peptidase 0.46 PFLU_RS11870 type II secretion system protein GspG low > 109
Alteromonas macleodii MIT1002 0.46 MIT1002_03011 Pectic enzymes secretion protein OutO 0.45 MIT1002_03979 Pullulanase secretion protein PulG
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_12285 prepilin peptidase 0.54 CSW01_13775 type II secretion system protein GspG
Pseudomonas stutzeri RCH2 0.46 Psest_3286 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.63 Psest_4200 general secretion pathway protein G low > 67
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_14320 methyltransferase 0.51 AO353_12560 type II secretion system protein GspG low > 101
Shewanella amazonensis SB2B 0.46 Sama_0367 prepilin peptidase (RefSeq) 0.48 Sama_0172 general secretion pathway protein G (RefSeq)
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS27315 A24 family peptidase 0.55 QEN71_RS29530 type II secretion system protein GspG low > 153
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_16005 methyltransferase 0.52 AO356_09330 type II secretion system protein GspG low > 104
Shewanella sp. ANA-3 0.43 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) 0.48 Shewana3_0154 general secretion pathway protein G (RefSeq) 0.73 11
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2140 type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A 0.44 B158DRAFT_0692 general secretion pathway protein G
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.53 Pf6N2E2_3743 General secretion pathway protein G low > 103
Shewanella oneidensis MR-1 0.43 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) 0.47 SO0169 gspG general secretion pathway protein G (NCBI ptt file) 0.81 7
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_06255 leader peptidase (prepilin peptidase) / N-methyltransferase 0.54 H281DRAFT_02352 general secretion pathway protein G 0.57 6
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS17155 peptidase A24 0.54 BPHYT_RS19615 general secretion pathway protein G
Acidovorax sp. GW101-3H11 0.42 Ac3H11_4764 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.54 Ac3H11_2038 General secretion pathway protein G
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.53 GFF1382 General secretion pathway protein G low > 90
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS10050 A24 family peptidase 0.25 ABZR86_RS13105 type II secretion system major pseudopilin GspG 0.74 2
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS01855 A24 family peptidase 0.57 ABZR87_RS03410 type II secretion system major pseudopilin GspG 0.65 29
Variovorax sp. SCN45 0.41 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.52 GFF5244 General secretion pathway protein G low > 127
Lysobacter sp. OAE881 0.41 ABIE51_RS04805 A24 family peptidase 0.32 ABIE51_RS13610 type II secretion system major pseudopilin GspG low > 62
Pseudomonas sp. RS175 0.41 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.46 PFR28_01746 Type II secretion system protein G low > 88
Ralstonia solanacearum UW163 0.41 UW163_RS07435 prepilin peptidase 0.56 UW163_RS05925 type II secretion system protein GspG
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS17990 methyltransferase 0.58 RR42_RS19480 secretion system protein G 0.88 6
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS06190 prepilin peptidase 0.56 RALBFv3_RS07700 type II secretion system protein GspG 0.73 16
Paraburkholderia graminis OAS925 0.41 ABIE53_003596 leader peptidase (prepilin peptidase)/N-methyltransferase 0.54 ABIE53_000300 general secretion pathway protein G 0.87 6
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.1345.1 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.51 Xcc-8004.945.1 General secretion pathway protein G
Shewanella loihica PV-4 0.39 Shew_3440 prepilin peptidase (RefSeq) 0.53 Shew_3616 general secretion pathway protein G (RefSeq)
Ralstonia solanacearum PSI07 0.38 RPSI07_RS11050 prepilin peptidase 0.57 RPSI07_RS09560 type II secretion system protein GspG 0.50 20
Variovorax sp. OAS795 0.38 ABID97_RS23440 A24 family peptidase 0.51 ABID97_RS06990 type II secretion system major pseudopilin GspG low > 91
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_10830 pulO prepilin peptidase 0.31 OKGIIK_16225 gspG type II secretion system major pseudopilin GspG low > 52
Ralstonia solanacearum GMI1000 0.37 RS_RS14140 prepilin peptidase 0.55 RS_RS15600 type II secretion system protein GspG 0.48 7
Rhodanobacter denitrificans MT42 0.36 LRK55_RS03730 A24 family peptidase 0.30 LRK55_RS09610 type II secretion system major pseudopilin GspG low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS03960 A24 family peptidase 0.30 LRK54_RS09970 type II secretion system major pseudopilin GspG low > 59
Rahnella sp. WP5 0.34 EX31_RS16215 prepilin peptidase 0.47 EX31_RS16180 type II secretion system major pseudopilin GspG low > 89
Pectobacterium carotovorum WPP14 0.34 HER17_RS06740 A24 family peptidase 0.50 HER17_RS06700 type II secretion system major pseudopilin GspG low > 75
Dickeya dadantii 3937 0.34 DDA3937_RS14750 prepilin peptidase 0.50 DDA3937_RS14785 type II secretion system major pseudopilin GspG 0.45 20
Klebsiella michiganensis M5al 0.33 BWI76_RS05035 prepilin peptidase 0.47 BWI76_RS05075 type II secretion system protein GspG
Dickeya dianthicola 67-19 0.33 HGI48_RS14685 prepilin peptidase 0.50 HGI48_RS14720 type II secretion system major pseudopilin GspG low > 71
Dickeya dianthicola ME23 0.33 DZA65_RS15630 prepilin peptidase 0.50 DZA65_RS15665 type II secretion system major pseudopilin GspG low > 75
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS01760 methyltransferase 0.33 HSERO_RS00940 general secretion pathway protein low > 78
Enterobacter sp. TBS_079 0.30 MPMX20_01525 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.45 MPMX20_01518 Type II secretion system protein G 0.50 66
Erwinia tracheiphila SCR3 0.30 LU632_RS25275 A24 family peptidase 0.45 LU632_RS25245 gspG type II secretion system major pseudopilin GspG low > 74
Escherichia coli ECRC101 0.30 OKFHMN_00235 pulO prepilin peptidase 0.47 OKFHMN_00270 gspG type II secretion system major pseudopilin GspG
Escherichia coli ECRC98 0.30 JDDGAC_30345 pulO prepilin peptidase 0.47 JDDGAC_30310 gspG type II secretion system major pseudopilin GspG
Escherichia coli ECRC102 0.30 NIAGMN_28555 pulO prepilin peptidase 0.47 NIAGMN_28590 gspG type II secretion system major pseudopilin GspG
Escherichia coli ECRC101 0.30 MCAODC_15315 pulO prepilin peptidase 0.47 MCAODC_15280 gspG type II secretion system major pseudopilin GspG
Enterobacter asburiae PDN3 0.29 EX28DRAFT_2069 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.47 EX28DRAFT_2076 type II secretion system protein G low > 76
Escherichia coli Nissle 1917 0.26 ECOLIN_RS17100 prepilin peptidase PppA 0.52 ECOLIN_RS17070 type II secretion system major pseudopilin GspG low > 52
Escherichia coli ECOR38 0.26 HEPCGN_18035 pppA prepilin peptidase PppA 0.52 HEPCGN_18065 gspG general secretion pathway protein G 0.90 11
Escherichia coli ECOR27 0.26 NOLOHH_10960 pppA prepilin peptidase PppA 0.52 NOLOHH_10990 gspG general secretion pathway protein G low > 57
Escherichia coli BL21 0.26 ECD_02841 bifunctional prepilin leader peptidase/ methylase 0.52 ECD_02835 putative type II secretion protein GspG 0.95 7
Escherichia fergusonii Becca 0.26 EFB2_00842 Prepilin peptidase PppA 0.52 EFB2_00848 Type II secretion system protein G low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_00736 Leader peptidase PppA 0.52 OHPLBJKB_00742 Type II secretion system protein G low > 73
Escherichia coli BW25113 0.26 b2972 b2972 putative peptidase (VIMSS) 0.41 b3328 gspG pseudopilin, cryptic, general secretion pathway (NCBI) low > 76
Caulobacter crescentus NA1000 0.20 CCNA_00183 type II secretory pathway, prepilin signal peptidase 0.47 CCNA_00175 type II secretion pathway protein G low > 66
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_00183 type II secretory pathway, prepilin signal peptidase 0.47 CCNA_00175 type II secretion pathway protein G low > 67

Not shown: 6 genomes with orthologs for HP15_2411 only; 1 genomes with orthologs for HP15_1604 only