| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3794 | | Transcriptional regulators | 1.0 | Psest_1619 | | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 | 0.28 | 11 |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_0234 | | transcriptional regulator, AsnC family | 0.77 | Psyr_1333 | | UBA/THIF-type NAD/FAD binding fold protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_0234 | | transcriptional regulator, AsnC family | 0.77 | Psyr_1333 | | UBA/THIF-type NAD/FAD binding fold protein | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_09160 | | AsnC family transcriptional regulator | 0.78 | AO353_16420 | | thiamine biosynthesis protein ThiF | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_2143 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.78 | Pf1N1B4_3074 | | HesA/MoeB/ThiF family protein related to EC-YgdL | low | > 87 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_04400 | | Leucine-responsive regulatory protein | 0.78 | PFR28_00387 | | tRNA threonylcarbamoyladenosine dehydratase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_811 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.78 | PfGW456L13_4719 | | HesA/MoeB/ThiF family protein related to EC-YgdL | low | > 87 |
| Pseudomonas putida KT2440 | 0.92 | PP_5271 | | DNA-binding transcriptional dual regulator, leucine-binding | 0.77 | PP_1527 | | tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.92 | PFLU_RS29385 | | AsnC family transcriptional regulator | 0.79 | PFLU_RS06230 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 109 |
| Pseudomonas simiae WCS417 | 0.92 | PS417_27710 | | AsnC family transcriptional regulator | 0.78 | PS417_06165 | | thiamine biosynthesis protein ThiF | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_4390 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.78 | Pf6N2E2_3081 | | HesA/MoeB/ThiF family protein related to EC-YgdL | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.92 | PFLU_RS29385 | | AsnC family transcriptional regulator | 0.79 | PFLU_RS06230 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_12615 | | AsnC family transcriptional regulator | 0.78 | AO356_06085 | | thiamine biosynthesis protein ThiF | 0.23 | 78 |
| Pseudomonas sp. S08-1 | 0.91 | OH686_13680 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.86 | OH686_06545 | | HesA/MoeB/ThiF family protein | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.81 | Xcc-8004.4622.1 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.38 | Xcc-8004.3494.1 | | Molybdopterin biosynthesis protein MoeB | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.77 | LRK55_RS00365 | | winged helix-turn-helix transcriptional regulator | 0.47 | LRK55_RS14520 | | tRNA threonylcarbamoyladenosine dehydratase | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.77 | OKGIIK_06660 | lrp | AsnC family transcriptional regulator | 0.43 | OKGIIK_03630 | tcdA | tRNA A37 threonylcarbamoyladenosine dehydratase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.77 | LRK54_RS00595 | | winged helix-turn-helix transcriptional regulator | 0.47 | LRK54_RS14805 | | tRNA threonylcarbamoyladenosine dehydratase | low | > 59 |
| Herbaspirillum seropedicae SmR1 | 0.70 | HSERO_RS08380 | | AsnC family transcriptional regulator | 0.40 | HSERO_RS06230 | | heme biosynthesis protein HemY | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.70 | BPHYT_RS14785 | | AsnC family transcriptional regulator | 0.45 | BPHYT_RS15990 | | heme biosynthesis protein HemY | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.70 | H281DRAFT_04288 | | transcriptional regulator, AsnC family | 0.46 | H281DRAFT_04134 | | tRNA A37 threonylcarbamoyladenosine dehydratase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.70 | ABIE53_003132 | | Lrp/AsnC family leucine-responsive transcriptional regulator | 0.46 | ABIE53_003371 | | tRNA A37 threonylcarbamoyladenosine dehydratase | low | > 113 |
| Ralstonia solanacearum PSI07 | 0.69 | RPSI07_RS19595 | | AsnC family transcriptional regulator | 0.42 | RPSI07_RS20115 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.68 | ABZR87_RS09565 | | Lrp/AsnC ligand binding domain-containing protein | 0.45 | ABZR87_RS09175 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.67 | RR42_RS04590 | | AsnC family transcriptional regulator | 0.43 | RR42_RS15305 | | heme biosynthesis protein HemY | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.67 | QEN71_RS04195 | | Lrp/AsnC ligand binding domain-containing protein | 0.44 | QEN71_RS02715 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 153 |
| Ralstonia solanacearum IBSBF1503 | 0.67 | RALBFv3_RS13875 | | AsnC family transcriptional regulator | 0.42 | RALBFv3_RS13100 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 76 |
| Ralstonia solanacearum UW163 | 0.67 | UW163_RS15935 | | AsnC family transcriptional regulator | 0.42 | UW163_RS00465 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | — | — |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS04610 | | AsnC family transcriptional regulator | 0.44 | RS_RS03895 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 80 |
| Castellaniella sp019104865 MT123 | 0.63 | ABCV34_RS10805 | | winged helix-turn-helix transcriptional regulator | 0.30 | ABCV34_RS00665 | | tRNA threonylcarbamoyladenosine dehydratase | — | — |
| Kangiella aquimarina DSM 16071 | 0.61 | B158DRAFT_1822 | | Transcriptional regulators | 0.47 | B158DRAFT_0922 | | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 | low | > 40 |
| Variovorax sp. OAS795 | 0.60 | ABID97_RS22380 | | winged helix-turn-helix transcriptional regulator | 0.36 | ABID97_RS16680 | | tRNA threonylcarbamoyladenosine dehydratase | low | > 91 |
| Variovorax sp. SCN45 | 0.60 | GFF1774 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.30 | GFF289 | | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 | low | > 127 |
| Vibrio cholerae E7946 ATCC 55056 | 0.60 | CSW01_09530 | | leucine-responsive transcriptional regulator Lrp | 0.57 | CSW01_11750 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | — | — |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS09740 | lrp | leucine-responsive transcriptional regulator Lrp | 0.56 | LU632_RS06230 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 74 |
| Pantoea sp. MT58 | 0.58 | IAI47_12915 | | leucine-responsive transcriptional regulator Lrp | 0.56 | IAI47_04005 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF4893 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.55 | GFF4870 | | CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway | low | > 78 |
| Enterobacter sp. TBS_079 | 0.58 | MPMX20_01551 | | Leucine-responsive regulatory protein | 0.53 | MPMX20_03675 | | tRNA threonylcarbamoyladenosine dehydratase | low | > 85 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS09655 | | leucine-responsive regulatory protein | 0.52 | BWI76_RS22975 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 92 |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_03295 | lrp | leucine-responsive transcriptional regulator Lrp | 0.54 | NIAGMN_17865 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | — | — |
| Dickeya dianthicola ME23 | 0.58 | DZA65_RS09915 | | leucine-responsive transcriptional regulator Lrp | 0.54 | DZA65_RS05375 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS12360 | | leucine-responsive transcriptional regulator Lrp | 0.55 | HER17_RS16435 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 75 |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS04730 | | leucine-responsive transcriptional regulator Lrp | 0.55 | ECOLIN_RS15670 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 52 |
| Escherichia fergusonii Becca | 0.58 | EFB2_03172 | | Leucine-responsive regulatory protein | 0.55 | EFB2_01105 | | tRNA threonylcarbamoyladenosine dehydratase | low | > 86 |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_2043 | | transcriptional regulator, AsnC family | 0.53 | EX28DRAFT_2888 | | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 | low | > 76 |
| Escherichia coli BL21 | 0.58 | ECD_00893 | | leucine-responsive global transcriptional regulator | 0.55 | ECD_02663 | | tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA | low | > 60 |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_22935 | lrp | leucine-responsive transcriptional regulator Lrp | 0.55 | HEPCGN_19350 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | 0.76 | 16 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_02779 | | Leucine-responsive regulatory protein | 0.55 | OHPLBJKB_00919 | | tRNA threonylcarbamoyladenosine dehydratase | low | > 73 |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS09590 | | leucine-responsive transcriptional regulator Lrp | 0.55 | DDA3937_RS05030 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 74 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_09385 | lrp | leucine-responsive transcriptional regulator Lrp | 0.54 | JDDGAC_23760 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | — | — |
| Escherichia coli ECRC62 | 0.58 | BNILDI_20400 | lrp | leucine-responsive transcriptional regulator Lrp | 0.55 | BNILDI_10480 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | — | — |
| Escherichia coli ECRC101 | 0.58 | OKFHMN_05575 | lrp | leucine-responsive transcriptional regulator Lrp | 0.54 | OKFHMN_20095 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | — | — |
| Escherichia coli BW25113 | 0.58 | b0889 | lrp | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | 0.55 | b2812 | ygdL | hypothetical protein (NCBI) | low | > 76 |
| Dickeya dianthicola 67-19 | 0.58 | HGI48_RS09605 | | leucine-responsive transcriptional regulator Lrp | 0.54 | HGI48_RS05035 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 71 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_22160 | lrp | leucine-responsive transcriptional regulator Lrp | 0.54 | KEDOAH_08035 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | — | — |
| Escherichia coli ECRC101 | 0.58 | MCAODC_24965 | lrp | leucine-responsive transcriptional regulator Lrp | 0.54 | MCAODC_10620 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | — | — |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_22145 | lrp | leucine-responsive transcriptional regulator Lrp | 0.55 | NOLOHH_11975 | tcdA | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 57 |
| Serratia liquefaciens MT49 | 0.58 | IAI46_08555 | | leucine-responsive transcriptional regulator Lrp | 0.55 | IAI46_20360 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 86 |
| Rahnella sp. WP5 | 0.58 | EX31_RS18530 | | leucine-responsive transcriptional regulator Lrp | 0.54 | EX31_RS13130 | | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | low | > 89 |
| Shewanella loihica PV-4 | 0.57 | Shew_2025 | | leucine-responsive transcriptional regulator (RefSeq) | 0.54 | Shew_3251 | | UBA/THIF-type NAD/FAD binding protein (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.56 | Sama_1771 | | leucine-responsive transcriptional regulator (RefSeq) | 0.59 | Sama_0546 | | HesA/MoeB/ThiF family protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.55 | SO2305 | lrp | leucine-responsive regulatory protein (NCBI ptt file) | 0.57 | SO3895 | | HesA/MoeB/ThiF family protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_2049 | | leucine-responsive transcriptional regulator (RefSeq) | 0.58 | Shewana3_0735 | | UBA/THIF-type NAD/FAD binding protein (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.54 | MIT1002_02181 | | Leucine-responsive regulatory protein | 0.57 | MIT1002_01936 | | Molybdopterin-synthase adenylyltransferase | low | > 70 |
| Acidovorax sp. GW101-3H11 | 0.49 | Ac3H11_2849 | | PutR, transcriptional activator of PutA and PutP | 0.37 | Ac3H11_2482 | | Probable HesA/MoeB/ThiF family protein | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF2725 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.30 | GFF4538 | | Probable HesA/MoeB/ThiF family protein | low | > 90 |
| Acinetobacter radioresistens SK82 | 0.45 | MPMX26_01467 | | Leucine-responsive regulatory protein | 0.37 | MPMX26_00481 | | tRNA threonylcarbamoyladenosine dehydratase | low | > 36 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_2690 | | transcriptional regulator, AsnC family | 0.58 | HP15_266 | | UBA/THIF-type NAD/FAD binding protein | low | > 73 |
Not shown: 12 genomes with orthologs for Psest_3794 only; 6 genomes with orthologs for Psest_1619 only