Conservation of cofitness between GFF4290 and GFF1379 in Hydrogenophaga sp. GW460-11-11-14-LB1

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4290 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 1.0 GFF1379 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.85 9
Acidovorax sp. GW101-3H11 0.90 Ac3H11_574 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.82 Ac3H11_2042 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.70 50
Variovorax sp. OAS795 0.88 ABID97_RS15365 sulfate adenylyltransferase subunit CysD 0.77 ABID97_RS07000 threonine ammonia-lyase, biosynthetic 0.54 30
Variovorax sp. SCN45 0.87 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.78 GFF5246 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.90 14
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS15565 sulfate adenylyltransferase subunit 2 0.65 HSERO_RS19510 threonine dehydratase 0.90 5
Castellaniella sp019104865 MT123 0.65 ABCV34_RS14115 sulfate adenylyltransferase subunit CysD 0.65 ABCV34_RS14460 threonine ammonia-lyase, biosynthetic low > 48
Ralstonia solanacearum GMI1000 0.64 RS_RS12155 sulfate adenylyltransferase subunit CysD 0.64 RS_RS02225 threonine ammonia-lyase, biosynthetic
Ralstonia solanacearum PSI07 0.64 RPSI07_RS12790 sulfate adenylyltransferase subunit CysD 0.64 RPSI07_RS21810 threonine ammonia-lyase, biosynthetic 0.61 4
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS16255 sulfate adenylyltransferase 0.63 RR42_RS02315 threonine dehydratase low > 128
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS04585 sulfate adenylyltransferase subunit CysD 0.63 RALBFv3_RS11395 threonine ammonia-lyase, biosynthetic
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS04740 sulfate adenylyltransferase subunit 2 0.62 BPHYT_RS11065 threonine dehydratase
Ralstonia solanacearum UW163 0.64 UW163_RS09085 sulfate adenylyltransferase subunit CysD 0.63 UW163_RS02190 threonine ammonia-lyase, biosynthetic
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS00195 sulfate adenylyltransferase subunit CysD 0.62 ABZR87_RS07360 threonine ammonia-lyase, biosynthetic 0.80 9
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS25240 sulfate adenylyltransferase subunit CysD 0.62 QEN71_RS01985 threonine ammonia-lyase, biosynthetic 0.86 25
Paraburkholderia graminis OAS925 0.63 ABIE53_001229 sulfate adenylyltransferase subunit 2 0.61 ABIE53_002293 threonine dehydratase low > 113
Dechlorosoma suillum PS 0.61 Dsui_1983 sulfate adenylyltransferase, small subunit 0.60 Dsui_0728 threonine ammonia-lyase, biosynthetic, long form
Alteromonas macleodii MIT1002 0.43 MIT1002_01274 Sulfate adenylyltransferase subunit 2 0.46 MIT1002_04040 L-threonine dehydratase biosynthetic IlvA
Marinobacter adhaerens HP15 0.42 HP15_2462 sulfate adenylyltransferase, small subunit 0.53 HP15_3213 threonine dehydratase biosynthetic 0.94 3
Acinetobacter radioresistens SK82 0.41 MPMX26_02326 Sulfate adenylyltransferase subunit 2 0.46 MPMX26_01278 L-threonine dehydratase biosynthetic IlvA 0.81 19
Shewanella loihica PV-4 0.41 Shew_1422 sulfate adenylyltransferase subunit 2 (RefSeq) 0.48 Shew_0293 threonine dehydratase (RefSeq) 0.76 17
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS15305 sulfate adenylyltransferase subunit CysD 0.48 A4249_RS00615 threonine ammonia-lyase, biosynthetic 0.99 18
Shewanella sp. ANA-3 0.40 Shewana3_0863 sulfate adenylyltransferase subunit 2 (RefSeq) 0.47 Shewana3_0359 threonine dehydratase (RefSeq) 0.84 62
Shewanella oneidensis MR-1 0.40 SO3727 cysD sulfate adenylyltransferase, subunit 2 (NCBI ptt file) 0.49 SO4344 ilvA threonine dehydratase (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS18070 sulfate adenylyltransferase subunit CysD 0.47 DZA65_RS21330 threonine ammonia-lyase, biosynthetic 0.84 12
Dickeya dianthicola 67-19 0.40 HGI48_RS16995 sulfate adenylyltransferase subunit CysD 0.49 HGI48_RS20290 threonine ammonia-lyase, biosynthetic low > 71
Dickeya dadantii 3937 0.40 DDA3937_RS16925 sulfate adenylyltransferase subunit CysD 0.49 DDA3937_RS20150 threonine ammonia-lyase, biosynthetic 0.77 53
Shewanella amazonensis SB2B 0.40 Sama_2891 sulfate adenylyltransferase subunit 2 (RefSeq) 0.48 Sama_3278 threonine dehydratase (RefSeq) 0.91 50
Rahnella sp. WP5 0.40 EX31_RS07880 sulfate adenylyltransferase subunit CysD 0.46 EX31_RS15010 threonine ammonia-lyase, biosynthetic 0.92 42
Pantoea sp. MT58 0.40 IAI47_04180 sulfate adenylyltransferase subunit CysD 0.46 IAI47_01040 threonine ammonia-lyase, biosynthetic 0.75 26
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2848 sulfate adenylyltransferase, small subunit 0.46 EX28DRAFT_4444 threonine ammonia-lyase, biosynthetic, long form 0.80 28
Enterobacter sp. TBS_079 0.40 MPMX20_03638 Sulfate adenylyltransferase subunit 2 0.46 MPMX20_04498 L-threonine dehydratase biosynthetic IlvA 0.57 18
Klebsiella michiganensis M5al 0.40 BWI76_RS22700 sulfate adenylyltransferase subunit 2 0.47 BWI76_RS00980 PLP-dependent threonine dehydratase 0.61 10
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_00981 Sulfate adenylyltransferase subunit 2 0.46 OHPLBJKB_04281 L-threonine dehydratase biosynthetic IlvA low > 73
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_12960 sulfate adenylyltransferase subunit CysD 0.46 CSW01_00135 threonine ammonia-lyase, biosynthetic low > 62
Escherichia coli ECRC99 0.40 KEDOAH_07700 cysD sulfate adenylyltransferase subunit CysD 0.47 KEDOAH_13515 ilvA threonine ammonia-lyase, biosynthetic
Escherichia coli ECOR27 0.40 NOLOHH_12255 cysD sulfate adenylyltransferase subunit CysD 0.47 NOLOHH_06770 ilvA threonine ammonia-lyase, biosynthetic low > 57
Escherichia coli ECRC101 0.40 MCAODC_10965 cysD sulfate adenylyltransferase subunit CysD 0.47 MCAODC_05140 ilvA threonine ammonia-lyase, biosynthetic
Escherichia coli ECRC101 0.40 OKFHMN_20440 cysD sulfate adenylyltransferase subunit CysD 0.47 OKFHMN_14635 ilvA threonine ammonia-lyase, biosynthetic
Escherichia coli ECRC102 0.40 NIAGMN_18210 cysD sulfate adenylyltransferase subunit CysD 0.47 NIAGMN_12390 ilvA threonine ammonia-lyase, biosynthetic
Escherichia coli ECRC98 0.40 JDDGAC_24105 cysD sulfate adenylyltransferase subunit CysD 0.47 JDDGAC_18255 ilvA threonine ammonia-lyase, biosynthetic
Serratia liquefaciens MT49 0.40 IAI46_03715 sulfate adenylyltransferase subunit CysD 0.48 IAI46_24340 threonine ammonia-lyase, biosynthetic low > 86
Escherichia coli ECRC62 0.40 BNILDI_10805 cysD sulfate adenylyltransferase subunit CysD 0.47 BNILDI_04755 ilvA threonine ammonia-lyase, biosynthetic
Escherichia fergusonii Becca 0.40 EFB2_01158 Sulfate adenylyltransferase subunit 2 0.46 EFB2_04864 L-threonine dehydratase biosynthetic IlvA low > 86
Escherichia coli BW25113 0.39 b2752 cysD sulfate adenylyltransferase subunit 2 (NCBI) 0.46 b3772 ilvA threonine dehydratase (NCBI) 0.89 9
Escherichia coli ECOR38 0.39 HEPCGN_19620 cysD sulfate adenylyltransferase subunit CysD 0.47 HEPCGN_13345 ilvA threonine ammonia-lyase, biosynthetic low > 85
Escherichia coli Nissle 1917 0.39 ECOLIN_RS15385 sulfate adenylyltransferase subunit CysD 0.46 ECOLIN_RS21670 threonine ammonia-lyase, biosynthetic low > 52
Escherichia coli BL21 0.39 ECD_02602 sulfate adenylyltransferase, subunit 2 0.46 ECD_03650 l-threonine dehydratase, biosynthetic; also known as threonine deaminase low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF4800 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.47 GFF2900 Threonine dehydratase biosynthetic (EC 4.3.1.19) low > 78
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_01295 cysD sulfate adenylyltransferase subunit CysD 0.55 OKGIIK_13620 ilvA threonine ammonia-lyase, biosynthetic low > 52
Pectobacterium carotovorum WPP14 0.39 HER17_RS04285 sulfate adenylyltransferase subunit CysD 0.47 HER17_RS01080 threonine ammonia-lyase, biosynthetic 0.88 43
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS18865 sulfate adenylyltransferase subunit CysD 0.58 ABZR86_RS15925 threonine ammonia-lyase, biosynthetic low > 74
Erwinia tracheiphila SCR3 0.39 LU632_RS06425 cysD sulfate adenylyltransferase subunit CysD 0.46 LU632_RS24395 ilvA threonine ammonia-lyase, biosynthetic 0.93 12
Pseudomonas sp. RS175 0.39 PFR28_00193 Sulfate adenylyltransferase subunit 2 0.52 PFR28_04834 L-threonine dehydratase biosynthetic IlvA 0.60 7
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_5257 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.52 Pf6N2E2_3938 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.65 2
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_16665 sulfate adenylyltransferase 0.52 AO356_10330 threonine dehydratase 0.61 42
Azospirillum sp. SherDot2 0.39 MPMX19_06719 Sulfate adenylyltransferase subunit 2 0.52 MPMX19_02807 L-threonine dehydratase biosynthetic IlvA low > 112
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1058 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.52 Pf1N1B4_2280 Threonine dehydratase biosynthetic (EC 4.3.1.19)
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_05080 sulfate adenylyltransferase 0.52 AO353_08485 threonine dehydratase 0.58 46
Pseudomonas putida KT2440 0.39 PP_1303 Sulfate adenylyltransferase subunit 2 0.53 PP_5149 threonine deaminase low > 96
Pseudomonas simiae WCS417 0.39 PS417_03715 sulfate adenylyltransferase subunit 2 0.52 PS417_27010 threonine dehydratase
Pseudomonas sp. S08-1 0.39 OH686_08450 Sulfate adenylyltransferase subunit 2 0.54 OH686_11400 threonine ammonia-lyase, biosynthetic
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.52 PFLU_RS28665 threonine ammonia-lyase, biosynthetic 0.53 8
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4993 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.52 PfGW456L13_949 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.71 30
Pseudomonas fluorescens SBW25 0.39 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.52 PFLU_RS28665 threonine ammonia-lyase, biosynthetic low > 109
Pseudomonas stutzeri RCH2 0.38 Psest_3294 sulfate adenylyltransferase, small subunit 0.54 Psest_3866 threonine ammonia-lyase, biosynthetic, long form
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4128 sulfate adenylyltransferase subunit 2 0.52 Psyr_4846 L-threonine ammonia-lyase low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4128 sulfate adenylyltransferase subunit 2 0.52 Psyr_4846 L-threonine ammonia-lyase low > 86
Rhodanobacter denitrificans MT42 0.38 LRK55_RS05290 sulfate adenylyltransferase subunit CysD 0.54 LRK55_RS09940 threonine ammonia-lyase, biosynthetic
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS05520 sulfate adenylyltransferase subunit CysD 0.54 LRK54_RS10300 threonine ammonia-lyase, biosynthetic low > 59

Not shown: 26 genomes with orthologs for GFF4290 only; 0 genomes with orthologs for GFF1379 only