Conservation of cofitness between Psest_0498 and Psest_1241 in Pseudomonas stutzeri RCH2

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0498 ribosome small subunit-dependent GTPase A 1.0 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.31 9
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1421 Ribosome small subunit-stimulated GTPase EngC 0.83 Pf1N1B4_3005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) — —
Pseudomonas sp. RS175 0.86 PFR28_05112 Small ribosomal subunit biogenesis GTPase RsgA 0.81 PFR28_00276 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_13100 GTPase RsgA 0.83 AO353_15785 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.40 10
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3623 Ribosome small subunit-stimulated GTPase EngC 0.81 Pf6N2E2_3199 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) — —
Pseudomonas fluorescens SBW25 0.85 PFLU_RS02525 small ribosomal subunit biogenesis GTPase RsgA 0.81 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 109
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_08700 GTPase RsgA 0.81 AO356_06695 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Pseudomonas simiae WCS417 0.85 PS417_02445 GTPase RsgA 0.82 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_163 Ribosome small subunit-stimulated GTPase EngC 0.83 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) — —
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS02525 small ribosomal subunit biogenesis GTPase RsgA 0.81 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_0563 Protein of unknown function DUF258 0.81 Psyr_1227 Queuosine biosynthesis protein — —
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_0563 Protein of unknown function DUF258 0.81 Psyr_1227 Queuosine biosynthesis protein — —
Pseudomonas sp. S08-1 0.84 OH686_09515 ribosome small subunit-dependent GTPase A 0.84 OH686_17425 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Pseudomonas putida KT2440 0.82 PP_4903 Putative ribosome biogenesis GTPase RsgA 0.83 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Marinobacter adhaerens HP15 0.56 HP15_2507 ribosome-associated GTPase 0.67 HP15_1478 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Dickeya dadantii 3937 0.45 DDA3937_RS18945 small ribosomal subunit biogenesis GTPase RsgA 0.69 DDA3937_RS05465 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Dickeya dianthicola 67-19 0.45 HGI48_RS19040 small ribosomal subunit biogenesis GTPase RsgA 0.69 HGI48_RS05525 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Dickeya dianthicola ME23 0.45 DZA65_RS20155 small ribosomal subunit biogenesis GTPase RsgA 0.69 DZA65_RS05850 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Shewanella loihica PV-4 0.44 Shew_0558 ribosome-associated GTPase (RefSeq) 0.69 Shew_2338 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase (RefSeq) — —
Serratia liquefaciens MT49 0.44 IAI46_01570 small ribosomal subunit biogenesis GTPase RsgA 0.67 IAI46_04835 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Rahnella sp. WP5 0.44 EX31_RS08870 small ribosomal subunit biogenesis GTPase RsgA 0.68 EX31_RS22090 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli BW25113 0.43 b4161 yjeQ orf, hypothetical protein (VIMSS) 0.66 b0405 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03881 Small ribosomal subunit biogenesis GTPase RsgA 0.66 OHPLBJKB_03271 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Escherichia coli BL21 0.43 ECD_04031 ribosome small subunit-dependent GTPase A 0.66 ECD_00353 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF1990 Ribosome small subunit-stimulated GTPase EngC 0.66 GFF4304 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) — —
Escherichia coli ECRC101 0.43 MCAODC_02830 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.66 MCAODC_27735 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECRC102 0.43 NIAGMN_10165 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.66 NIAGMN_06565 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECRC98 0.43 JDDGAC_15955 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.66 JDDGAC_12165 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECOR27 0.43 NOLOHH_04580 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.66 NOLOHH_01445 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia fergusonii Becca 0.43 EFB2_04374 Small ribosomal subunit biogenesis GTPase RsgA 0.66 EFB2_03652 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Escherichia coli ECRC99 0.43 KEDOAH_15845 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.66 KEDOAH_19455 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS24175 small ribosomal subunit biogenesis GTPase RsgA 0.65 ECOLIN_RS02440 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECRC62 0.43 BNILDI_06910 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.66 BNILDI_22860 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECRC101 0.43 OKFHMN_12320 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.66 OKFHMN_08510 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECOR38 0.43 HEPCGN_10545 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.66 HEPCGN_07150 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Pectobacterium carotovorum WPP14 0.43 HER17_RS02410 small ribosomal subunit biogenesis GTPase RsgA 0.67 HER17_RS15995 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Klebsiella michiganensis M5al 0.42 BWI76_RS02475 ribosome small subunit-dependent GTPase 0.67 BWI76_RS06295 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Pantoea sp. MT58 0.42 IAI47_02535 small ribosomal subunit biogenesis GTPase RsgA 0.68 IAI47_14810 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Shewanella amazonensis SB2B 0.42 Sama_3033 ribosome-associated GTPase (RefSeq) 0.69 Sama_2194 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) — —
Alteromonas macleodii MIT1002 0.42 MIT1002_00495 Putative ribosome biogenesis GTPase RsgA 0.64 MIT1002_02814 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Shewanella oneidensis MR-1 0.42 SO0591 conserved hypothetical protein TIGR00157 (NCBI ptt file) 0.69 SO3114 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.42 Shewana3_0589 ribosome-associated GTPase (RefSeq) 0.69 Shewana3_1434 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) — —
Erwinia tracheiphila SCR3 0.40 LU632_RS01945 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.67 LU632_RS18485 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_3359 ribosome small subunit-dependent GTPase A 0.67 EX28DRAFT_2566 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Enterobacter sp. TBS_079 0.40 MPMX20_00442 Small ribosomal subunit biogenesis GTPase RsgA 0.67 MPMX20_00996 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Acinetobacter radioresistens SK82 0.39 MPMX26_02631 Small ribosomal subunit biogenesis GTPase RsgA 0.52 MPMX26_00441 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 36
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1944 ribosome small subunit-dependent GTPase A 0.62 B158DRAFT_2515 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 40
Dechlorosoma suillum PS 0.29 Dsui_3225 ribosome small subunit-dependent GTPase A 0.50 Dsui_3322 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS09635 ribosome small subunit-dependent GTPase A 0.54 ABZR87_RS01275 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS19530 ribosome small subunit-dependent GTPase A 0.54 RPSI07_RS11620 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Ralstonia solanacearum UW163 0.28 UW163_RS15870 ribosome small subunit-dependent GTPase A 0.54 UW163_RS07945 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS13940 ribosome small subunit-dependent GTPase A 0.54 RALBFv3_RS05680 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS04245 ribosome small subunit-dependent GTPase A 0.51 QEN71_RS26635 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Ralstonia solanacearum GMI1000 0.28 RS_RS04675 GTPase RsgA 0.54 RS_RS13570 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_04299 ribosome biogenesis GTPase 0.51 H281DRAFT_04671 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS14730 GTPase RsgA 0.51 BPHYT_RS03405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Paraburkholderia graminis OAS925 0.27 ABIE53_003121 ribosome biogenesis GTPase 0.50 ABIE53_000832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_1834 ribosome small subunit-dependent GTPase A 0.39 Echvi_0042 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Castellaniella sp019104865 MT123 0.26 ABCV34_RS07005 ribosome small subunit-dependent GTPase A 0.54 ABCV34_RS15370 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Bacteroides thetaiotaomicron VPI-5482 0.26 BT2250 putative GTPase (NCBI ptt file) 0.35 BT3214 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03093 ribosome small subunit-dependent GTPase A 0.35 BACOVA_02915 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS23860 ribosome small subunit-dependent GTPase A 0.38 CA265_RS07505 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS09445 ribosome small subunit-dependent GTPase A 0.35 HMPREF1181_RS01705 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS07195 GTPase RsgA 0.56 HSERO_RS06170 S-adenosylmethionine tRNA ribosyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS20340 ribosome small subunit-dependent GTPase A 0.39 ABZR88_RS03940 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Parabacteroides merdae CL09T00C40 0.24 HMPREF1078_RS05190 ribosome small subunit-dependent GTPase A 0.35 HMPREF1078_RS17105 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS13840 ribosome small subunit-dependent GTPase A 0.36 HMPREF1058_RS11320 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS09450 ribosome small subunit-dependent GTPase A 0.36 ABI39_RS05610 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF5734 Ribosome small subunit-stimulated GTPase EngC 0.48 GFF2801 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 90
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1680 Ribosome small subunit-stimulated GTPase EngC 0.49 Ac3H11_778 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) — —
Variovorax sp. OAS795 0.21 ABID97_RS08775 ribosome small subunit-dependent GTPase A 0.52 ABID97_RS01590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 91
Variovorax sp. SCN45 0.21 GFF3957 Ribosome small subunit biogenesis RbfA-release protein RsgA 0.51 GFF5535 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) low > 127
Fusobacterium nucleatum SB010 0.20 HUW76_06405 ribosome small subunit-dependent GTPase A 0.39 HUW76_03590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 35
Bosea sp. OAE506 0.18 ABIE41_RS16730 ribosome small subunit-dependent GTPase A 0.38 ABIE41_RS17830 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 77

Not shown: 0 genomes with orthologs for Psest_0498 only; 26 genomes with orthologs for Psest_1241 only