| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF4364 | | Putative HTH-type transcriptional regulator ybaO | 1.0 | GFF1035 | | Peptide chain release factor 3 | 0.65 | 16 |
| Escherichia coli ECOR27 | 0.97 | NOLOHH_01215 | decR | DNA-binding transcriptional regulator DecR | 0.97 | NOLOHH_03600 | prfC | peptide chain release factor 3 | low | > 75 |
| Escherichia coli ECRC101 | 0.97 | MCAODC_27505 | decR | DNA-binding transcriptional regulator DecR | 0.97 | MCAODC_01795 | prfC | peptide chain release factor 3 | low | > 87 |
| Escherichia coli ECRC99 | 0.97 | KEDOAH_19685 | decR | DNA-binding transcriptional regulator DecR | 0.97 | KEDOAH_16865 | prfC | peptide chain release factor 3 | — | — |
| Escherichia fergusonii Becca | 0.97 | EFB2_03610 | | DNA-binding transcriptional activator DecR | 0.97 | EFB2_04072 | | Peptide chain release factor RF3 | low | > 86 |
| Escherichia coli BW25113 | 0.97 | b0447 | ybaO | putative LRP-like transcriptional regulator (VIMSS) | 0.97 | b4375 | prfC | peptide chain release factor 3 (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.97 | ECOLIN_RS02680 | | DNA-binding transcriptional regulator DecR | 0.97 | ECOLIN_RS25110 | | peptide chain release factor 3 | — | — |
| Escherichia coli ECRC102 | 0.97 | NIAGMN_06335 | decR | DNA-binding transcriptional regulator DecR | 0.97 | NIAGMN_09130 | prfC | peptide chain release factor 3 | — | — |
| Escherichia coli ECOR38 | 0.97 | HEPCGN_06895 | decR | DNA-binding transcriptional regulator DecR | 0.97 | HEPCGN_09285 | prfC | peptide chain release factor 3 | low | > 87 |
| Escherichia coli BL21 | 0.97 | ECD_00399 | | putative DNA-binding transcriptional regulator | 0.97 | ECD_04250 | | peptide chain release factor RF-3 | low | > 61 |
| Escherichia coli ECRC100 | 0.97 | OKFHMN_08280 | decR | DNA-binding transcriptional regulator DecR | 0.97 | OKFHMN_11280 | prfC | peptide chain release factor 3 | low | > 80 |
| Escherichia coli ECRC98 | 0.97 | JDDGAC_11935 | decR | DNA-binding transcriptional regulator DecR | 0.97 | JDDGAC_14875 | prfC | peptide chain release factor 3 | low | > 86 |
| Escherichia coli ECRC62 | 0.97 | BNILDI_22630 | decR | DNA-binding transcriptional regulator DecR | 0.97 | BNILDI_08000 | prfC | peptide chain release factor 3 | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.97 | OHPLBJKB_03226 | | DNA-binding transcriptional activator DecR | 0.97 | OHPLBJKB_03687 | | Peptide chain release factor RF3 | low | > 73 |
| Enterobacter asburiae PDN3 | 0.97 | EX28DRAFT_2522 | | Transcriptional regulators | 0.96 | EX28DRAFT_3583 | | peptide chain release factor 3 | low | > 76 |
| Enterobacter sp. TBS_079 | 0.96 | MPMX20_01039 | | DNA-binding transcriptional activator DecR | 0.96 | MPMX20_00673 | | Peptide chain release factor RF3 | low | > 85 |
| Klebsiella michiganensis M5al | 0.91 | BWI76_RS06580 | | transcriptional regulator | 0.98 | BWI76_RS04100 | | peptide chain release factor 3 | — | — |
| Serratia liquefaciens MT49 | 0.81 | IAI46_05065 | | Lrp/AsnC family transcriptional regulator | 0.93 | IAI46_02875 | | peptide chain release factor 3 | low | > 86 |
| Pantoea sp. MT58 | 0.80 | IAI47_14600 | | Lrp/AsnC family transcriptional regulator | 0.92 | IAI47_03375 | | peptide chain release factor 3 | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.79 | HER17_RS15805 | | Lrp/AsnC family transcriptional regulator | 0.92 | HER17_RS19065 | | peptide chain release factor 3 | low | > 75 |
| Rahnella sp. WP5 | 0.79 | EX31_RS22300 | | Lrp/AsnC family transcriptional regulator | 0.92 | EX31_RS04095 | | peptide chain release factor 3 | — | — |
| Dickeya dadantii 3937 | 0.78 | DDA3937_RS05680 | | Lrp/AsnC family transcriptional regulator | 0.91 | DDA3937_RS02445 | | peptide chain release factor 3 | low | > 74 |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS06050 | | Lrp/AsnC family transcriptional regulator | 0.91 | DZA65_RS02505 | | peptide chain release factor 3 | low | > 75 |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS05725 | | Lrp/AsnC ligand binding domain-containing protein | 0.91 | HGI48_RS02400 | | peptide chain release factor 3 | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_05405 | | Lrp/AsnC family transcriptional regulator | 0.86 | CSW01_03470 | | peptide chain release factor 3 | low | > 62 |
| Pseudomonas putida KT2440 | 0.61 | PP_4595 | | putative LRP-like transcriptional regulator | 0.67 | PP_0872 | | Peptide chain release factor 3 | low | > 96 |
| Rhodopseudomonas palustris CGA009 | 0.59 | TX73_000050 | | Lrp/AsnC family transcriptional regulator | 0.48 | TX73_011820 | | peptide chain release factor 3 | low | > 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF5022 | | Transcriptional regulator, AsnC family | 0.52 | GFF768 | | Peptide chain release factor 3 | low | > 90 |
| Caulobacter crescentus NA1000 Δfur | 0.58 | CCNA_00432 | | AsnC-family transcriptional regulator | 0.43 | CCNA_01123 | | peptide chain release factor RF-3 | low | > 67 |
| Caulobacter crescentus NA1000 | 0.58 | CCNA_00432 | | AsnC-family transcriptional regulator | 0.43 | CCNA_01123 | | peptide chain release factor RF-3 | low | > 66 |
| Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS13965 | | Lrp/AsnC family transcriptional regulator | 0.61 | ABZR87_RS23485 | | peptide chain release factor 3 | low | > 80 |
| Agrobacterium fabrum C58 | 0.57 | Atu1885 | | transcriptional regulator, AsnC family | 0.46 | Atu0315 | | peptide chain release factor 3 | — | — |
| Bosea sp. OAE506 | 0.56 | ABIE41_RS02640 | | Lrp/AsnC family transcriptional regulator | 0.47 | ABIE41_RS06180 | | peptide chain release factor 3 | low | > 77 |
| Sinorhizobium meliloti 1021 | 0.56 | SMc00131 | | transcriptional regulator | 0.48 | SMc00427 | | peptide chain release factor RF-3 protein | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS07955 | | transcriptional regulator | 0.51 | BPHYT_RS34275 | | peptide chain release factor 3 | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_05082 | | transcriptional regulator, AsnC family | 0.51 | H281DRAFT_03538 | | bacterial peptide chain release factor 3 (bRF-3) | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_001805 | | Lrp/AsnC family transcriptional regulator | 0.51 | ABIE53_004717 | | peptide chain release factor 3 | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS23210 | | Lrp/AsnC family transcriptional regulator | 0.50 | QEN71_RS17200 | | peptide chain release factor 3 | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.52 | RR42_RS02555 | | transcriptional regulator | 0.61 | RR42_RS37475 | | peptide chain release factor 3 | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.52 | Ac3H11_4930 | | Transcriptional regulator, AsnC family | 0.52 | Ac3H11_3041 | | Peptide chain release factor 3 | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.52 | Psyr_0133 | | transcriptional regulator, AsnC family | 0.68 | Psyr_4253 | | bacterial peptide chain release factor 3 (bRF-3) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.52 | Psyr_0133 | | transcriptional regulator, AsnC family | 0.68 | Psyr_4253 | | bacterial peptide chain release factor 3 (bRF-3) | — | — |
| Variovorax sp. SCN45 | 0.51 | GFF4980 | | Transcriptional regulator, AsnC family | 0.50 | GFF2045 | | Peptide chain release factor 3 | low | > 127 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS10690 | | Lrp/AsnC family transcriptional regulator | 0.47 | ABIE40_RS01450 | | peptide chain release factor 3 | — | — |
| Alteromonas macleodii MIT1002 | 0.50 | MIT1002_03625 | | Leucine-responsive regulatory protein | 0.83 | MIT1002_01192 | | Peptide chain release factor 3 | low | > 70 |
| Azospirillum brasilense Sp245 | 0.50 | AZOBR_RS32440 | | ArsR family transcriptional regulator | 0.53 | AZOBR_RS14730 | | peptide chain release factor 3 | — | — |
| Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS14145 | | ArsR family transcriptional regulator | 0.61 | HSERO_RS14640 | | peptide chain release factor 3 | low | > 78 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_24405 | | ArsR family transcriptional regulator | 0.68 | AO353_05420 | | peptide chain release factor 3 | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.42 | Pf6N2E2_4493 | | Transcriptional regulator, AsnC family | 0.69 | Pf6N2E2_3327 | | Peptide chain release factor 3 | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_910 | | Transcriptional regulator, AsnC family | 0.68 | PfGW456L13_5060 | | Peptide chain release factor 3 | low | > 87 |
| Phaeobacter inhibens DSM 17395 | 0.42 | PGA1_c25250 | | transcriptional regulator, AsnC family | 0.46 | PGA1_c10620 | | peptide chain release factor 3 | — | — |
| Pseudomonas sp. RS175 | 0.42 | PFR28_04311 | | DNA-binding transcriptional activator DecR | 0.69 | PFR28_00118 | | Peptide chain release factor RF3 | — | — |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS28870 | | Lrp/AsnC family transcriptional regulator | 0.68 | PFLU_RS04070 | | peptide chain release factor 3 | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS28870 | | Lrp/AsnC family transcriptional regulator | 0.68 | PFLU_RS04070 | | peptide chain release factor 3 | low | > 109 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_27210 | | AsnC family transcriptional regulator | 0.69 | PS417_04030 | | peptide chain release factor 3 | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_13070 | | AsnC family transcriptional regulator | 0.69 | AO356_07285 | | peptide chain release factor 3 | — | — |
| Marinobacter adhaerens HP15 | 0.41 | HP15_860 | | transcriptional regulator, AsnC family protein | 0.80 | HP15_541 | | peptide chain release factor 3 | low | > 73 |
| Dinoroseobacter shibae DFL-12 | 0.40 | Dshi_1156 | | transcriptional regulator, AsnC family (RefSeq) | 0.44 | Dshi_1336 | | peptide chain release factor 3 (RefSeq) | — | — |
| Pseudomonas stutzeri RCH2 | 0.39 | Psest_3518 | | Transcriptional regulators | 0.69 | Psest_3351 | | peptide chain release factor 3 | low | > 67 |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS05945 | | Lrp/AsnC family transcriptional regulator | 0.61 | UW163_RS16595 | | peptide chain release factor 3 | — | — |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS15580 | | Lrp/AsnC family transcriptional regulator | 0.61 | RS_RS25080 | | peptide chain release factor 3 | 0.37 | 80 |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS07680 | | Lrp/AsnC family transcriptional regulator | 0.61 | RALBFv3_RS23345 | | peptide chain release factor 3 | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS09580 | | Lrp/AsnC family transcriptional regulator | 0.61 | RPSI07_RS07810 | | peptide chain release factor 3 | low | > 81 |
| Dyella japonica UNC79MFTsu3.2 | 0.38 | ABZR86_RS15320 | | Lrp/AsnC family transcriptional regulator | 0.67 | ABZR86_RS19000 | | peptide chain release factor 3 | — | — |
| Rhodospirillum rubrum S1H | 0.36 | Rru_A0216 | | Transcriptional Regulator, AsnC family (NCBI) | 0.51 | Rru_A2497 | | Peptide chain release factor 3 (NCBI) | low | > 58 |
| Parabacteroides merdae CL09T00C40 | 0.35 | HMPREF1078_RS07325 | | Lrp/AsnC family transcriptional regulator | 0.49 | HMPREF1078_RS04145 | | peptide chain release factor 3 | low | > 61 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS13205 | | Lrp/AsnC family transcriptional regulator | 0.43 | A4249_RS15275 | | peptide chain release factor 3 | low | > 48 |
Not shown: 1 genomes with orthologs for GFF4364 only; 27 genomes with orthologs for GFF1035 only