Conservation of cofitness between EX31_RS19675 and EX31_RS20260 in Rahnella sp. WP5

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS19675 TSUP family transporter 1.0 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase 0.33 8
Serratia liquefaciens MT49 0.79 IAI46_18015 TSUP family transporter 0.80 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase low > 86
Enterobacter sp. TBS_079 0.76 MPMX20_03262 putative membrane transporter protein YfcA 0.75 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0277 Predicted permeases 0.75 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) low > 76
Pantoea sp. MT58 0.75 IAI47_06160 TSUP family transporter 0.76 IAI47_05360 oxygen-dependent coproporphyrinogen oxidase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF1948 Putative membrane protein YfcA 0.75 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) low > 78
Klebsiella michiganensis M5al 0.74 BWI76_RS20425 hypothetical protein 0.71 BWI76_RS20740 coproporphyrinogen III oxidase
Escherichia fergusonii Becca 0.71 EFB2_01531 putative membrane transporter protein YfcA 0.74 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase low > 86
Escherichia coli ECOR38 0.71 HEPCGN_21830 yfcA putative membrane transporter protein YfcA 0.74 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase low > 87
Escherichia coli ECRC102 0.71 NIAGMN_20400 yfcA putative membrane transporter protein YfcA 0.74 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase
Escherichia coli BL21 0.71 ECD_02252 TauE/TSUP family inner membrane protein 0.75 ECD_02336 coproporphyrinogen III oxidase low > 61
Escherichia coli ECRC98 0.71 JDDGAC_26585 yfcA putative membrane transporter protein YfcA 0.74 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase low > 86
Escherichia coli Nissle 1917 0.71 ECOLIN_RS13480 sulfite exporter TauE/SafE family protein 0.75 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase
Escherichia coli ECRC99 0.71 KEDOAH_05570 yfcA putative membrane transporter protein YfcA 0.74 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase
Escherichia coli BW25113 0.71 b2327 yfcA conserved inner membrane protein (NCBI) 0.75 b2436 hemF coproporphyrinogen III oxidase (NCBI) low > 76
Escherichia coli ECRC100 0.71 OKFHMN_22625 yfcA putative membrane transporter protein YfcA 0.74 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase low > 80
Escherichia coli ECRC101 0.71 MCAODC_13665 yfcA putative membrane transporter protein YfcA 0.74 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase low > 87
Escherichia coli ECOR27 0.71 NOLOHH_14260 yfcA putative membrane transporter protein YfcA 0.75 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01378 putative membrane transporter protein YfcA 0.75 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase low > 73
Escherichia coli ECRC62 0.71 BNILDI_13180 yfcA putative membrane transporter protein YfcA 0.75 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase low > 75
Pectobacterium carotovorum WPP14 0.71 HER17_RS06945 sulfite exporter TauE/SafE family protein 0.76 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase low > 75
Erwinia tracheiphila SCR3 0.69 LU632_RS07785 sulfite exporter TauE/SafE family protein 0.75 LU632_RS06720 hemF oxygen-dependent coproporphyrinogen oxidase
Dickeya dadantii 3937 0.69 DDA3937_RS14570 TSUP family transporter 0.76 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase
Dickeya dianthicola 67-19 0.65 HGI48_RS14520 TSUP family transporter 0.75 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS15455 TSUP family transporter 0.75 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase
Shewanella sp. ANA-3 0.54 Shewana3_2613 hypothetical protein (RefSeq) 0.72 Shewana3_0041 coproporphyrinogen III oxidase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_1266 hypothetical protein (RefSeq) 0.69 Sama_0050 coproporphyrinogen III oxidase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.53 SO2846 conserved hypothetical protein (NCBI ptt file) 0.71 SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) low > 76
Azospirillum sp. SherDot2 0.51 MPMX19_00682 putative membrane transporter protein YfcA 0.33 MPMX19_05010 Oxygen-dependent coproporphyrinogen-III oxidase
Azospirillum brasilense Sp245 0.50 AZOBR_RS10405 membrane protein 0.30 AZOBR_RS20735 coproporphyrinogen III oxidase
Shewanella loihica PV-4 0.48 Shew_2464 hypothetical protein (RefSeq) 0.72 Shew_3729 coproporphyrinogen III oxidase (RefSeq) low > 60
Castellaniella sp019104865 MT123 0.45 ABCV34_RS12215 TSUP family transporter 0.54 ABCV34_RS02545 oxygen-dependent coproporphyrinogen oxidase low > 48
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_12070 hypothetical protein 0.68 CSW01_00275 coproporphyrinogen III oxidase
Caulobacter crescentus NA1000 0.40 CCNA_00376 putative membrane spanning protein 0.30 CCNA_00540 coproporphyrinogen III oxidase
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_00376 putative membrane spanning protein 0.30 CCNA_00540 coproporphyrinogen III oxidase
Rhizobium sp. OAE497 0.39 ABIE40_RS11125 TSUP family transporter 0.30 ABIE40_RS13225 oxygen-dependent coproporphyrinogen oxidase
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_4150 Predicted permeases 0.28 Ga0059261_3217 coproporphyrinogen oxidase (EC 1.3.3.3)
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_369 Putative membrane protein YfcA 0.64 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Lysobacter sp. OAE881 0.38 ABIE51_RS11860 TSUP family transporter 0.62 ABIE51_RS02020 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas sp. RS175 0.31 PFR28_02189 putative membrane transporter protein YfcA 0.63 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_4779 Membrane protein, putative 0.64 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_1267 Membrane protein, putative 0.63 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_25900 hypothetical protein 0.62 AO356_11310 coproporphyrinogen III oxidase
Pseudomonas simiae WCS417 0.30 PS417_12880 membrane protein 0.62 PS417_00120 coproporphyrinogen III oxidase
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_26530 hypothetical protein 0.63 AO353_10665 coproporphyrinogen III oxidase
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS13560 TSUP family transporter 0.63 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas stutzeri RCH2 0.29 Psest_2079 Predicted permeases 0.64 Psest_0028 Coproporphyrinogen III oxidase low > 67
Pseudomonas fluorescens SBW25 0.29 PFLU_RS13560 TSUP family transporter 0.63 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_2454 Protein of unknown function DUF81 0.63 Psyr_0024 coproporphyrinogen oxidase
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_2454 Protein of unknown function DUF81 0.63 Psyr_0024 coproporphyrinogen oxidase
Ralstonia solanacearum GMI1000 0.27 RS_RS16720 membrane protein 0.59 RS_RS11000 coproporphyrinogen III oxidase
Pseudomonas sp. S08-1 0.26 OH686_03525 hypothetical protein 0.63 OH686_12490 Coproporphyrinogen III oxidase, aerobic
Ralstonia solanacearum PSI07 0.26 RPSI07_RS08365 membrane protein 0.59 RPSI07_RS13675 oxygen-dependent coproporphyrinogen oxidase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF1891 FIG011065: hypothetical protein 0.55 GFF4526 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS04180 TSUP family transporter 0.59 ABZR87_RS15415 oxygen-dependent coproporphyrinogen oxidase
Acidovorax sp. GW101-3H11 0.25 Ac3H11_3324 FIG011065: hypothetical protein 0.54 Ac3H11_2420 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas putida KT2440 0.25 PP_0487 conserved membrane protein of unknown function 0.63 PP_0073 Coproporphyrinogen-III oxidase, aerobic
Dechlorosoma suillum PS 0.25 Dsui_3484 putative permease 0.61 Dsui_1597 coproporphyrinogen III oxidase
Acinetobacter radioresistens SK82 0.24 MPMX26_02777 putative membrane transporter protein YfcA 0.56 MPMX26_02746 Oxygen-dependent coproporphyrinogen-III oxidase
Variovorax sp. SCN45 0.24 GFF5022 FIG011065: hypothetical protein 0.54 GFF301 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS10460 hypothetical protein 0.36 CA265_RS09350 coproporphyrinogen III oxidase
Ralstonia solanacearum UW163 0.23 UW163_RS04705 membrane protein 0.59 UW163_RS10120 coproporphyrinogen III oxidase
Variovorax sp. OAS795 0.23 ABID97_RS04095 TSUP family transporter 0.55 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS23970 membrane protein 0.59 HSERO_RS17765 coproporphyrinogen III oxidase
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS20255 membrane protein 0.58 RR42_RS04725 coproporphyrinogen III oxidase
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_18905 hypothetical protein 0.38 CA264_05715 coproporphyrinogen III oxidase
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.5298.1 FIG011065: hypothetical protein 0.60 Xcc-8004.5101.1 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Paraburkholderia sabiae LMG 24235 0.11 QEN71_RS15530 sulfite exporter TauE/SafE family protein 0.59 QEN71_RS24405 oxygen-dependent coproporphyrinogen oxidase
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS17725 sulfite exporter TauE/SafE family protein 0.59 RALBFv3_RS03550 coproporphyrinogen III oxidase

Not shown: 4 genomes with orthologs for EX31_RS19675 only; 15 genomes with orthologs for EX31_RS20260 only