Conservation of cofitness between ECD_03800 and ECD_04250 in Escherichia coli BL21

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03800 ferrous iron and zinc transporter 1.0 ECD_04250 peptide chain release factor RF-3 low > 61
Escherichia coli ECRC100 1.00 OKFHMN_13835 fieF CDF family cation-efflux transporter FieF 1.00 OKFHMN_11280 prfC peptide chain release factor 3 low > 80
Escherichia coli ECRC102 1.00 NIAGMN_11590 fieF CDF family cation-efflux transporter FieF 1.00 NIAGMN_09130 prfC peptide chain release factor 3 — —
Escherichia coli ECRC101 1.00 MCAODC_04335 fieF CDF family cation-efflux transporter FieF 1.00 MCAODC_01795 prfC peptide chain release factor 3 low > 87
Escherichia coli ECOR27 1.00 NOLOHH_05970 fieF CDF family cation-efflux transporter FieF 1.00 NOLOHH_03600 prfC peptide chain release factor 3 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04136 Ferrous-iron efflux pump FieF 1.00 OHPLBJKB_03687 Peptide chain release factor RF3 low > 73
Escherichia coli ECRC62 1.00 BNILDI_05555 fieF CDF family cation-efflux transporter FieF 1.00 BNILDI_08000 prfC peptide chain release factor 3 low > 75
Escherichia coli ECRC98 1.00 JDDGAC_17460 fieF CDF family cation-efflux transporter FieF 1.00 JDDGAC_14875 prfC peptide chain release factor 3 low > 86
Escherichia coli ECRC99 1.00 KEDOAH_14320 fieF CDF family cation-efflux transporter FieF 1.00 KEDOAH_16865 prfC peptide chain release factor 3 — —
Escherichia coli BW25113 1.00 b3915 fieF ferrous iron efflux protein F (NCBI) 1.00 b4375 prfC peptide chain release factor 3 (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS22550 CDF family cation-efflux transporter FieF 1.00 ECOLIN_RS25110 peptide chain release factor 3 low > 55
Escherichia coli ECOR38 1.00 HEPCGN_12480 fieF CDF family cation-efflux transporter FieF 1.00 HEPCGN_09285 prfC peptide chain release factor 3 low > 87
Escherichia fergusonii Becca 1.00 EFB2_04703 Ferrous-iron efflux pump FieF 1.00 EFB2_04072 Peptide chain release factor RF3 low > 86
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4389 cation diffusion facilitator family transporter 0.95 EX28DRAFT_3583 peptide chain release factor 3 low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF2282 Cobalt-zinc-cadmium resistance protein 0.97 GFF1035 Peptide chain release factor 3 low > 78
Enterobacter sp. TBS_079 0.90 MPMX20_04553 Ferrous-iron efflux pump FieF 0.95 MPMX20_00673 Peptide chain release factor RF3 low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS00730 cation-efflux pump FieF 0.97 BWI76_RS04100 peptide chain release factor 3 low > 92
Serratia liquefaciens MT49 0.81 IAI46_24650 CDF family cation-efflux transporter FieF 0.91 IAI46_02875 peptide chain release factor 3 low > 86
Pantoea sp. MT58 0.81 IAI47_00775 CDF family cation-efflux transporter FieF 0.91 IAI47_03375 peptide chain release factor 3 low > 76
Dickeya dadantii 3937 0.74 DDA3937_RS00840 CDF family cation-efflux transporter FieF 0.91 DDA3937_RS02445 peptide chain release factor 3 low > 74
Pectobacterium carotovorum WPP14 0.73 HER17_RS00720 CDF family cation-efflux transporter FieF 0.91 HER17_RS19065 peptide chain release factor 3 low > 75
Erwinia tracheiphila SCR3 0.72 LU632_RS21845 fieF CDF family cation-efflux transporter FieF 0.89 LU632_RS02475 prfC peptide chain release factor 3 low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS21580 CDF family cation-efflux transporter FieF 0.91 DZA65_RS02505 peptide chain release factor 3 low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS20535 CDF family cation-efflux transporter FieF 0.91 HGI48_RS02400 peptide chain release factor 3 — —
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_13580 cation-efflux pump FieF 0.86 CSW01_03470 peptide chain release factor 3 low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_4333 Cation efflux protein 0.67 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_4333 Cation efflux protein 0.67 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) — —
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_15475 ferrous iron transporter 0.68 AO356_07285 peptide chain release factor 3 — —
Pseudomonas stutzeri RCH2 0.44 Psest_0573 cation diffusion facilitator family transporter 0.68 Psest_3351 peptide chain release factor 3 low > 67
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5036 Cobalt-zinc-cadmium resistance protein 0.68 Pf6N2E2_3327 Peptide chain release factor 3 — —
Pseudomonas simiae WCS417 0.44 PS417_24560 ferrous iron transporter 0.68 PS417_04030 peptide chain release factor 3 — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1393 Cobalt-zinc-cadmium resistance protein 0.68 PfGW456L13_5060 Peptide chain release factor 3 low > 87
Pseudomonas putida KT2440 0.43 PP_4774 divalent cation efflux transporter 0.67 PP_0872 Peptide chain release factor 3 low > 96
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS26490 cation diffusion facilitator family transporter 0.68 PFLU_RS04070 peptide chain release factor 3 0.17 19
Pseudomonas fluorescens SBW25 0.43 PFLU_RS26490 cation diffusion facilitator family transporter 0.68 PFLU_RS04070 peptide chain release factor 3 low > 109
Shewanella amazonensis SB2B 0.43 Sama_3430 cation efflux family protein (RefSeq) 0.85 Sama_0968 prfC peptide chain release factor 3 (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_06310 ferrous iron transporter 0.68 AO353_05420 peptide chain release factor 3 low > 101
Shewanella sp. ANA-3 0.42 Shewana3_0255 cation diffusion facilitator family transporter (RefSeq) 0.79 Shewana3_1037 prfC peptide chain release factor 3 (RefSeq) low > 73
Pseudomonas sp. RS175 0.42 PFR28_03835 Ferrous-iron efflux pump FieF 0.68 PFR28_00118 Peptide chain release factor RF3 — —
Magnetospirillum magneticum AMB-1 0.42 AMB_RS04510 ferrous iron transporter 0.52 AMB_RS01375 peptide chain release factor 3 — —
Shewanella loihica PV-4 0.41 Shew_3568 cation diffusion facilitator family transporter (RefSeq) 0.79 Shew_2820 prfC peptide chain release factor 3 (RefSeq) low > 60
Pseudomonas sp. S08-1 0.41 OH686_08810 Ferrous-iron efflux pump FieF 0.68 OH686_08765 peptide chain release factor 3 — —
Rhodospirillum rubrum S1H 0.39 Rru_A2628 Cation efflux protein (NCBI) 0.51 Rru_A2497 Peptide chain release factor 3 (NCBI) low > 58
Azospirillum sp. SherDot2 0.37 MPMX19_00714 Ferrous-iron efflux pump FieF 0.50 MPMX19_01192 Peptide chain release factor 3 — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_1887 cation diffusion facilitator family transporter 0.47 Ga0059261_2044 peptide chain release factor 3 low > 68
Rahnella sp. WP5 0.33 EX31_RS10790 cation diffusion facilitator family transporter 0.91 EX31_RS04095 peptide chain release factor 3 — —
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_03756 cation efflux family transporter 0.43 CCNA_01123 peptide chain release factor RF-3 — —
Caulobacter crescentus NA1000 0.32 CCNA_03756 cation efflux family transporter 0.43 CCNA_01123 peptide chain release factor RF-3 low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS11365 cation diffusion facilitator family transporter 0.43 A4249_RS15275 peptide chain release factor 3 low > 48
Agrobacterium fabrum C58 0.25 Atu2274 cation efflux system protein 0.46 Atu0315 peptide chain release factor 3 — —
Phaeobacter inhibens DSM 17395 0.24 PGA1_c01130 putative cation efflux pump 0.46 PGA1_c10620 peptide chain release factor 3 — —
Dechlorosoma suillum PS 0.23 Dsui_0813 cation diffusion facilitator family transporter 0.60 Dsui_2418 peptide chain release factor 3 low > 51
Sinorhizobium meliloti 1021 0.23 SMc02724 hypothetical protein 0.49 SMc00427 peptide chain release factor RF-3 protein low > 103
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS01545 cation transporter 0.47 HMPREF1181_RS05585 peptide chain release factor 3 low > 56
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS10965 cation transporter 0.48 HMPREF1058_RS07935 peptide chain release factor 3 — —
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS06105 cation transporter 0.48 ABI39_RS00385 peptide chain release factor 3 — —
Acidovorax sp. GW101-3H11 0.18 Ac3H11_4676 Cobalt-zinc-cadmium resistance protein 0.52 Ac3H11_3041 Peptide chain release factor 3 — —
Variovorax sp. SCN45 0.18 GFF2069 Cobalt-zinc-cadmium resistance protein 0.52 GFF2045 Peptide chain release factor 3 low > 127
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS07520 cation diffusion facilitator family transporter 0.48 CA265_RS18435 peptide chain release factor 3 low > 88
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS30535 cobalt transporter 0.61 RR42_RS37475 peptide chain release factor 3 low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF1671 Cobalt-zinc-cadmium resistance protein 0.52 GFF768 Peptide chain release factor 3 low > 90
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS02220 cation diffusion facilitator family transporter 0.49 HMPREF1078_RS04145 peptide chain release factor 3 low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.17 Echvi_4463 cation diffusion facilitator family transporter 0.51 Echvi_0584 peptide chain release factor 3 low > 79
Bacteroides thetaiotaomicron VPI-5482 0.16 BT1141 cation efflux family protein (NCBI ptt file) 0.47 BT1729 peptide chain release factor 3 (RF-3) (NCBI ptt file) low > 81
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS02620 cobalt transporter 0.62 HSERO_RS14640 peptide chain release factor 3 low > 78
Castellaniella sp019104865 MT123 0.16 ABCV34_RS08935 cation diffusion facilitator family transporter 0.54 ABCV34_RS12505 peptide chain release factor 3 low > 48
Synechococcus elongatus PCC 7942 0.15 Synpcc7942_1989 cation diffusion facilitator family transporter 0.44 Synpcc7942_2365 prfC peptide chain release factor 3 low > 38
Bacteroides ovatus ATCC 8483 0.15 BACOVA_03811 cation diffusion facilitator family transporter 0.47 BACOVA_04458 peptide chain release factor 3 low > 94
Lysobacter sp. OAE881 0.12 ABIE51_RS09615 cation diffusion facilitator family transporter 0.66 ABIE51_RS16210 peptide chain release factor 3 — —
Acinetobacter radioresistens SK82 0.11 MPMX26_00334 Ferrous-iron efflux pump FieF 0.67 MPMX26_00476 Peptide chain release factor RF3 low > 36

Not shown: 8 genomes with orthologs for ECD_03800 only; 24 genomes with orthologs for ECD_04250 only