Conservation of cofitness between CSW01_19480 and CSW01_18085 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19480 HlyD family type I secretion periplasmic adaptor subunit 1.0 CSW01_18085 ABC transporter 0.44 16
Shewanella loihica PV-4 0.51 Shew_0311 HlyD family type I secretion membrane fusion protein (RefSeq) 0.60 Shew_2402 ABC transporter-related protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.48 Sama_3260 HlyD family secretion protein (RefSeq) 0.58 Sama_1486 ABC transporter, ATP-binding protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.47 Shewana3_0380 HlyD family type I secretion membrane fusion protein (RefSeq) 0.58 Shewana3_1538 ABC transporter related (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO4319 HlyD family secretion protein (NCBI ptt file) 0.58 SO2927 ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Pseudomonas segetis P6 0.38 ACVTMO_RS14600 HlyD family type I secretion periplasmic adaptor subunit 0.53 ACVTMO_RS13175 ABC transporter ATP-binding protein low > 75
Pectobacterium carotovorum WPP14 0.38 HER17_RS05855 HlyD family type I secretion periplasmic adaptor subunit 0.57 HER17_RS15495 ABC transporter ATP-binding protein low > 75
Pseudomonas sp. S08-1 0.37 OH686_20620 Type I secretion membrane fusion protein, HlyD family 0.53 OH686_01795 ABC-type antimicrobial peptide transport system, ATPase component low > 80
Pseudomonas sp. RS175 0.37 PFR28_00781 Type I secretion system membrane fusion protein PrsE 0.55 PFR28_00957 Lipoprotein-releasing system ATP-binding protein LolD low > 88
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_04080 hemolysin secretion protein D 0.56 AO356_03230 ABC transporter
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_2652 HlyD family secretion protein 0.57 Pf6N2E2_2477 ABC transporter ATP-binding protein YvcR low > 103
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_4432 HlyD family secretion protein 0.53 PfGW456L13_2218 ABC transporter ATP-binding protein YvcR
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_522 HlyD family secretion protein 0.55 Pf1N1B4_296 ABC transporter ATP-binding protein YvcR low > 87
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_11195 hemolysin secretion protein D 0.55 AO353_19000 ABC transporter low > 101
Pseudomonas sp. DMC3 0.36 GFF2374 Type I secretion system membrane fusion protein PrsE 0.55 GFF4629 Lipoprotein-releasing system ATP-binding protein LolD
Pseudomonas sp. SVBP6 0.36 COO64_RS12360 HlyD family type I secretion periplasmic adaptor subunit 0.54 COO64_RS09775 ABC transporter ATP-binding protein
Pseudomonas orientalis W4I3 0.35 QF045_RS03620 HlyD family type I secretion periplasmic adaptor subunit 0.55 QF045_RS11120 ABC transporter ATP-binding protein low > 93
Pseudomonas stutzeri RCH2 0.35 Psest_1861 type I secretion membrane fusion protein, HlyD family 0.54 Psest_2337 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component low > 67
Pseudomonas putida KT2440 0.34 PP_0166 HlyD family secretion protein 0.57 PP_2317 putative ABC transporter - ATP binding subunit
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_00509 Type I secretion system membrane fusion protein PrsE 0.55 GEMAOFIL_01813 Lipoprotein-releasing system ATP-binding protein LolD
Pseudomonas sp. BP01 0.34 JOY50_RS28175 HlyD family type I secretion periplasmic adaptor subunit 0.57 JOY50_RS25830 ABC transporter ATP-binding protein
Methylophilus sp. DMC18 0.34 GFF461 Hemolysin secretion protein D, chromosomal 0.53 GFF2146 Lipoprotein-releasing system ATP-binding protein LolD low > 43
Acidovorax sp. GW101-3H11 0.33 Ac3H11_2110 Type I secretion system, membrane fusion protein LapC 0.49 Ac3H11_4142 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) low > 79
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_1159 type I secretion membrane fusion protein, HlyD family (RefSeq) 0.48 DvMF_2221 ABC transporter related (RefSeq) low > 51
Rhizobium sp. OAE497 0.30 ABIE40_RS22050 HlyD family type I secretion periplasmic adaptor subunit 0.44 ABIE40_RS18240 ABC transporter ATP-binding protein low > 107
Pseudomonas aeruginosa PA14 0.26 IKLFDK_09155 hemolysin D 0.59 IKLFDK_14515 ABC transporter low > 98
Pseudomonas aeruginosa MRSN321 0.26 DY961_RS21135 HlyD family efflux transporter periplasmic adaptor subunit 0.59 DY961_RS02705 ABC transporter ATP-binding protein low > 100
Pseudomonas aeruginosa PUPa3 0.26 DQ20_RS55205 HlyD family efflux transporter periplasmic adaptor subunit 0.59 DQ20_RS32890 ABC transporter ATP-binding protein low > 101
Pantoea sp. MT58 0.26 IAI47_06510 HlyD family efflux transporter periplasmic adaptor subunit 0.50 IAI47_14365 ABC transporter ATP-binding protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.26 PagCFBP13505_RS00495 HlyD family efflux transporter periplasmic adaptor subunit 0.50 PagCFBP13505_RS10845 ABC transporter ATP-binding protein
Enterobacter asburiae PDN3 0.25 EX28DRAFT_1343 type I secretion membrane fusion protein, HlyD family 0.58 EX28DRAFT_2464 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component low > 76
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS09005 type I secretion protein HlyD 0.52 HSERO_RS11170 ABC transporter ATP-binding protein low > 78
Enterobacter sp. TBS_079 0.25 MPMX20_02202 Type I secretion system membrane fusion protein PrsE 0.59 MPMX20_01093 Lipoprotein-releasing system ATP-binding protein LolD low > 85
Rahnella sp. WP5 0.25 EX31_RS19255 HlyD family efflux transporter periplasmic adaptor subunit 0.57 EX31_RS22610 ABC transporter ATP-binding protein low > 89
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_0542 type I secretion membrane fusion protein, HlyD family 0.44 Ga0059261_0562 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component low > 68
Magnetospirillum magneticum AMB-1 0.24 AMB_RS15920 HlyD family type I secretion periplasmic adaptor subunit 0.46 AMB_RS21885 ABC transporter
Escherichia coli Nissle 1917 0.24 ECOLIN_RS01695 HlyD family type I secretion periplasmic adaptor subunit 0.57 ECOLIN_RS02925 putative ABC transporter ATP-binding protein YbbA low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF4153 Type I secretion system, membrane fusion protein LapC 0.58 GFF4413 Uncharacterized metabolite ABC transporter in Enterobacteriaceae, ATP-binding protein EC-YbbA low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF2375 Type I secretion system, membrane fusion protein LapC 0.54 GFF4846 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) low > 90
Acinetobacter baumannii LAC-4 0.23 RR41_RS10420 HlyD family type I secretion periplasmic adaptor subunit 0.51 RR41_RS08860 ABC transporter ATP-binding protein low > 55
Klebsiella michiganensis M5al 0.23 BWI76_RS10025 secretion protein HlyD 0.59 BWI76_RS06950 ABC transporter ATP-binding protein low > 92
Dinoroseobacter shibae DFL-12 0.22 Dshi_2502 type I secretion membrane fusion protein, HlyD family (RefSeq) 0.42 Dshi_2678 ABC transporter related (RefSeq) low > 64
Azospirillum brasilense Sp245 0.22 AZOBR_RS18215 hypothetical protein 0.49 AZOBR_RS02260 ABC transporter
Escherichia coli ECRC98 0.22 JDDGAC_11685 emrA hemolysin D 0.57 JDDGAC_11615 ybbA ABC transporter ATP-binding protein low > 87
Escherichia coli ECRC101 0.22 MCAODC_27255 emrA hemolysin D 0.57 MCAODC_27185 ybbA ABC transporter ATP-binding protein low > 87
Escherichia coli ECRC102 0.22 NIAGMN_06090 emrA hemolysin D 0.57 NIAGMN_06020 ybbA ABC transporter ATP-binding protein low > 80
Escherichia coli ECRC100 0.22 OKFHMN_08040 emrA hemolysin D 0.57 OKFHMN_07970 ybbA ABC transporter ATP-binding protein low > 79
Escherichia coli ECOR38 0.22 HEPCGN_06675 emrA hemolysin D 0.57 HEPCGN_06600 ybbA ABC transporter ATP-binding protein low > 88
Variovorax sp. SCN45 0.22 GFF5852 Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC 0.50 GFF1015 ABC-type antimicrobial peptide transport system, ATPase component low > 127
Escherichia coli ECRC99 0.22 KEDOAH_19930 emrA hemolysin D 0.57 KEDOAH_20000 ybbA ABC transporter ATP-binding protein
Ralstonia solanacearum GMI1000 0.21 RS_RS22840 secretion protein HlyD 0.48 RS_RS08690 ABC transporter ATP-binding protein
Acinetobacter radioresistens SK82 0.21 MPMX26_01961 Type I secretion system membrane fusion protein PrsE 0.49 MPMX26_02339 ABC transporter ATP-binding protein YtrE
Phaeobacter inhibens DSM 17395 0.20 PGA1_c02430 type I secretion membrane fusion protein, HlyD family 0.45 PGA1_c26380 ABC transporter, ATP-binding protein low > 62
Rhodospirillum rubrum S1H 0.19 Rru_B0040 Type I secretion membrane fusion protein, HlyD (NCBI) 0.44 Rru_A3651 ABC transporter component (NCBI) low > 58
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_0934 Type I secretion membrane fusion protein, HlyD 0.55 Psyr_2067 ABC transporter low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_0934 Type I secretion membrane fusion protein, HlyD 0.55 Psyr_2067 ABC transporter low > 86
Variovorax sp. OAS795 0.18 ABID97_RS24340 HlyD family type I secretion periplasmic adaptor subunit 0.49 ABID97_RS14310 ATP-binding cassette domain-containing protein
Agrobacterium fabrum C58 0.16 Atu4414 bacteriocin ABC transporter permease 0.46 Atu2680 ABC transporter, nucleotide binding/ATPase protein low > 89
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS15325 HlyD family type I secretion periplasmic adaptor subunit 0.55 PFLU_RS08350 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.15 PFLU_RS15325 HlyD family type I secretion periplasmic adaptor subunit 0.55 PFLU_RS08350 ABC transporter ATP-binding protein low > 109
Pseudomonas simiae WCS417 0.15 PS417_13465 hemolysin D 0.55 PS417_08400 ABC transporter
Dechlorosoma suillum PS 0.14 Dsui_1775 type I secretion membrane fusion protein, HlyD family 0.53 Dsui_2307 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component low > 51
Bosea sp. OAE506 0.14 ABIE41_RS08105 HlyD family type I secretion periplasmic adaptor subunit 0.45 ABIE41_RS04810 ABC transporter ATP-binding protein low > 77
Erwinia amylovora T8 0.13 OLJFJH_04725 hemolysin D 0.52 OLJFJH_17650 ABC transporter ATP-binding protein low > 58
Xanthobacter sp. DMC5 0.13 GFF199 Type I secretion system membrane fusion protein PrsE 0.45 GFF3824 putative ABC transporter ATP-binding protein
Serratia liquefaciens MT49 0.12 IAI46_08100 HlyD family type I secretion periplasmic adaptor subunit 0.57 IAI46_05350 ABC transporter ATP-binding protein low > 87
Burkholderia phytofirmans PsJN 0.10 BPHYT_RS19915 hemolysin D 0.54 BPHYT_RS09495 ABC transporter ATP-binding protein low > 109
Cupriavidus basilensis FW507-4G11 0.07 RR42_RS12720 hemolysin D 0.50 RR42_RS09055 ABC transporter

Not shown: 5 genomes with orthologs for CSW01_19480 only; 35 genomes with orthologs for CSW01_18085 only