| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_19480 | | HlyD family type I secretion periplasmic adaptor subunit | 1.0 | CSW01_18085 | | ABC transporter | 0.44 | 16 |
| Shewanella loihica PV-4 | 0.51 | Shew_0311 | | HlyD family type I secretion membrane fusion protein (RefSeq) | 0.60 | Shew_2402 | | ABC transporter-related protein (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.48 | Sama_3260 | | HlyD family secretion protein (RefSeq) | 0.58 | Sama_1486 | | ABC transporter, ATP-binding protein (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.47 | Shewana3_0380 | | HlyD family type I secretion membrane fusion protein (RefSeq) | 0.58 | Shewana3_1538 | | ABC transporter related (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.47 | SO4319 | | HlyD family secretion protein (NCBI ptt file) | 0.58 | SO2927 | | ABC transporter, ATP-binding protein (NCBI ptt file) | low | > 76 |
| Pseudomonas segetis P6 | 0.38 | ACVTMO_RS14600 | | HlyD family type I secretion periplasmic adaptor subunit | 0.53 | ACVTMO_RS13175 | | ABC transporter ATP-binding protein | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.38 | HER17_RS05855 | | HlyD family type I secretion periplasmic adaptor subunit | 0.57 | HER17_RS15495 | | ABC transporter ATP-binding protein | low | > 75 |
| Pseudomonas sp. S08-1 | 0.37 | OH686_20620 | | Type I secretion membrane fusion protein, HlyD family | 0.53 | OH686_01795 | | ABC-type antimicrobial peptide transport system, ATPase component | low | > 80 |
| Pseudomonas sp. RS175 | 0.37 | PFR28_00781 | | Type I secretion system membrane fusion protein PrsE | 0.55 | PFR28_00957 | | Lipoprotein-releasing system ATP-binding protein LolD | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.37 | AO356_04080 | | hemolysin secretion protein D | 0.56 | AO356_03230 | | ABC transporter | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_2652 | | HlyD family secretion protein | 0.57 | Pf6N2E2_2477 | | ABC transporter ATP-binding protein YvcR | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.37 | PfGW456L13_4432 | | HlyD family secretion protein | 0.53 | PfGW456L13_2218 | | ABC transporter ATP-binding protein YvcR | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.36 | Pf1N1B4_522 | | HlyD family secretion protein | 0.55 | Pf1N1B4_296 | | ABC transporter ATP-binding protein YvcR | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_11195 | | hemolysin secretion protein D | 0.55 | AO353_19000 | | ABC transporter | low | > 101 |
| Pseudomonas sp. DMC3 | 0.36 | GFF2374 | | Type I secretion system membrane fusion protein PrsE | 0.55 | GFF4629 | | Lipoprotein-releasing system ATP-binding protein LolD | — | — |
| Pseudomonas sp. SVBP6 | 0.36 | COO64_RS12360 | | HlyD family type I secretion periplasmic adaptor subunit | 0.54 | COO64_RS09775 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas orientalis W4I3 | 0.35 | QF045_RS03620 | | HlyD family type I secretion periplasmic adaptor subunit | 0.55 | QF045_RS11120 | | ABC transporter ATP-binding protein | low | > 93 |
| Pseudomonas stutzeri RCH2 | 0.35 | Psest_1861 | | type I secretion membrane fusion protein, HlyD family | 0.54 | Psest_2337 | | Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component | low | > 67 |
| Pseudomonas putida KT2440 | 0.34 | PP_0166 | | HlyD family secretion protein | 0.57 | PP_2317 | | putative ABC transporter - ATP binding subunit | — | — |
| Pseudomonas lactucae CFBP13502 | 0.34 | GEMAOFIL_00509 | | Type I secretion system membrane fusion protein PrsE | 0.55 | GEMAOFIL_01813 | | Lipoprotein-releasing system ATP-binding protein LolD | — | — |
| Pseudomonas sp. BP01 | 0.34 | JOY50_RS28175 | | HlyD family type I secretion periplasmic adaptor subunit | 0.57 | JOY50_RS25830 | | ABC transporter ATP-binding protein | — | — |
| Methylophilus sp. DMC18 | 0.34 | GFF461 | | Hemolysin secretion protein D, chromosomal | 0.53 | GFF2146 | | Lipoprotein-releasing system ATP-binding protein LolD | low | > 43 |
| Acidovorax sp. GW101-3H11 | 0.33 | Ac3H11_2110 | | Type I secretion system, membrane fusion protein LapC | 0.49 | Ac3H11_4142 | | Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) | low | > 79 |
| Desulfovibrio vulgaris Miyazaki F | 0.33 | DvMF_1159 | | type I secretion membrane fusion protein, HlyD family (RefSeq) | 0.48 | DvMF_2221 | | ABC transporter related (RefSeq) | low | > 51 |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS22050 | | HlyD family type I secretion periplasmic adaptor subunit | 0.44 | ABIE40_RS18240 | | ABC transporter ATP-binding protein | low | > 107 |
| Pseudomonas aeruginosa PA14 | 0.26 | IKLFDK_09155 | | hemolysin D | 0.59 | IKLFDK_14515 | | ABC transporter | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.26 | DY961_RS21135 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.59 | DY961_RS02705 | | ABC transporter ATP-binding protein | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.26 | DQ20_RS55205 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.59 | DQ20_RS32890 | | ABC transporter ATP-binding protein | low | > 101 |
| Pantoea sp. MT58 | 0.26 | IAI47_06510 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.50 | IAI47_14365 | | ABC transporter ATP-binding protein | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.26 | PagCFBP13505_RS00495 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.50 | PagCFBP13505_RS10845 | | ABC transporter ATP-binding protein | — | — |
| Enterobacter asburiae PDN3 | 0.25 | EX28DRAFT_1343 | | type I secretion membrane fusion protein, HlyD family | 0.58 | EX28DRAFT_2464 | | Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component | low | > 76 |
| Herbaspirillum seropedicae SmR1 | 0.25 | HSERO_RS09005 | | type I secretion protein HlyD | 0.52 | HSERO_RS11170 | | ABC transporter ATP-binding protein | low | > 78 |
| Enterobacter sp. TBS_079 | 0.25 | MPMX20_02202 | | Type I secretion system membrane fusion protein PrsE | 0.59 | MPMX20_01093 | | Lipoprotein-releasing system ATP-binding protein LolD | low | > 85 |
| Rahnella sp. WP5 | 0.25 | EX31_RS19255 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.57 | EX31_RS22610 | | ABC transporter ATP-binding protein | low | > 89 |
| Sphingomonas koreensis DSMZ 15582 | 0.25 | Ga0059261_0542 | | type I secretion membrane fusion protein, HlyD family | 0.44 | Ga0059261_0562 | | Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component | low | > 68 |
| Magnetospirillum magneticum AMB-1 | 0.24 | AMB_RS15920 | | HlyD family type I secretion periplasmic adaptor subunit | 0.46 | AMB_RS21885 | | ABC transporter | — | — |
| Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS01695 | | HlyD family type I secretion periplasmic adaptor subunit | 0.57 | ECOLIN_RS02925 | | putative ABC transporter ATP-binding protein YbbA | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF4153 | | Type I secretion system, membrane fusion protein LapC | 0.58 | GFF4413 | | Uncharacterized metabolite ABC transporter in Enterobacteriaceae, ATP-binding protein EC-YbbA | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF2375 | | Type I secretion system, membrane fusion protein LapC | 0.54 | GFF4846 | | Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) | low | > 90 |
| Acinetobacter baumannii LAC-4 | 0.23 | RR41_RS10420 | | HlyD family type I secretion periplasmic adaptor subunit | 0.51 | RR41_RS08860 | | ABC transporter ATP-binding protein | low | > 55 |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS10025 | | secretion protein HlyD | 0.59 | BWI76_RS06950 | | ABC transporter ATP-binding protein | low | > 92 |
| Dinoroseobacter shibae DFL-12 | 0.22 | Dshi_2502 | | type I secretion membrane fusion protein, HlyD family (RefSeq) | 0.42 | Dshi_2678 | | ABC transporter related (RefSeq) | low | > 64 |
| Azospirillum brasilense Sp245 | 0.22 | AZOBR_RS18215 | | hypothetical protein | 0.49 | AZOBR_RS02260 | | ABC transporter | — | — |
| Escherichia coli ECRC98 | 0.22 | JDDGAC_11685 | emrA | hemolysin D | 0.57 | JDDGAC_11615 | ybbA | ABC transporter ATP-binding protein | low | > 87 |
| Escherichia coli ECRC101 | 0.22 | MCAODC_27255 | emrA | hemolysin D | 0.57 | MCAODC_27185 | ybbA | ABC transporter ATP-binding protein | low | > 87 |
| Escherichia coli ECRC102 | 0.22 | NIAGMN_06090 | emrA | hemolysin D | 0.57 | NIAGMN_06020 | ybbA | ABC transporter ATP-binding protein | low | > 80 |
| Escherichia coli ECRC100 | 0.22 | OKFHMN_08040 | emrA | hemolysin D | 0.57 | OKFHMN_07970 | ybbA | ABC transporter ATP-binding protein | low | > 79 |
| Escherichia coli ECOR38 | 0.22 | HEPCGN_06675 | emrA | hemolysin D | 0.57 | HEPCGN_06600 | ybbA | ABC transporter ATP-binding protein | low | > 88 |
| Variovorax sp. SCN45 | 0.22 | GFF5852 | | Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC | 0.50 | GFF1015 | | ABC-type antimicrobial peptide transport system, ATPase component | low | > 127 |
| Escherichia coli ECRC99 | 0.22 | KEDOAH_19930 | emrA | hemolysin D | 0.57 | KEDOAH_20000 | ybbA | ABC transporter ATP-binding protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.21 | RS_RS22840 | | secretion protein HlyD | 0.48 | RS_RS08690 | | ABC transporter ATP-binding protein | — | — |
| Acinetobacter radioresistens SK82 | 0.21 | MPMX26_01961 | | Type I secretion system membrane fusion protein PrsE | 0.49 | MPMX26_02339 | | ABC transporter ATP-binding protein YtrE | — | — |
| Phaeobacter inhibens DSM 17395 | 0.20 | PGA1_c02430 | | type I secretion membrane fusion protein, HlyD family | 0.45 | PGA1_c26380 | | ABC transporter, ATP-binding protein | low | > 62 |
| Rhodospirillum rubrum S1H | 0.19 | Rru_B0040 | | Type I secretion membrane fusion protein, HlyD (NCBI) | 0.44 | Rru_A3651 | | ABC transporter component (NCBI) | low | > 58 |
| Pseudomonas syringae pv. syringae B728a | 0.18 | Psyr_0934 | | Type I secretion membrane fusion protein, HlyD | 0.55 | Psyr_2067 | | ABC transporter | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.18 | Psyr_0934 | | Type I secretion membrane fusion protein, HlyD | 0.55 | Psyr_2067 | | ABC transporter | low | > 86 |
| Variovorax sp. OAS795 | 0.18 | ABID97_RS24340 | | HlyD family type I secretion periplasmic adaptor subunit | 0.49 | ABID97_RS14310 | | ATP-binding cassette domain-containing protein | — | — |
| Agrobacterium fabrum C58 | 0.16 | Atu4414 | | bacteriocin ABC transporter permease | 0.46 | Atu2680 | | ABC transporter, nucleotide binding/ATPase protein | low | > 89 |
| Pseudomonas fluorescens SBW25-INTG | 0.15 | PFLU_RS15325 | | HlyD family type I secretion periplasmic adaptor subunit | 0.55 | PFLU_RS08350 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.15 | PFLU_RS15325 | | HlyD family type I secretion periplasmic adaptor subunit | 0.55 | PFLU_RS08350 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.15 | PS417_13465 | | hemolysin D | 0.55 | PS417_08400 | | ABC transporter | — | — |
| Dechlorosoma suillum PS | 0.14 | Dsui_1775 | | type I secretion membrane fusion protein, HlyD family | 0.53 | Dsui_2307 | | putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component | low | > 51 |
| Bosea sp. OAE506 | 0.14 | ABIE41_RS08105 | | HlyD family type I secretion periplasmic adaptor subunit | 0.45 | ABIE41_RS04810 | | ABC transporter ATP-binding protein | low | > 77 |
| Erwinia amylovora T8 | 0.13 | OLJFJH_04725 | | hemolysin D | 0.52 | OLJFJH_17650 | | ABC transporter ATP-binding protein | low | > 58 |
| Xanthobacter sp. DMC5 | 0.13 | GFF199 | | Type I secretion system membrane fusion protein PrsE | 0.45 | GFF3824 | | putative ABC transporter ATP-binding protein | — | — |
| Serratia liquefaciens MT49 | 0.12 | IAI46_08100 | | HlyD family type I secretion periplasmic adaptor subunit | 0.57 | IAI46_05350 | | ABC transporter ATP-binding protein | low | > 87 |
| Burkholderia phytofirmans PsJN | 0.10 | BPHYT_RS19915 | | hemolysin D | 0.54 | BPHYT_RS09495 | | ABC transporter ATP-binding protein | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.07 | RR42_RS12720 | | hemolysin D | 0.50 | RR42_RS09055 | | ABC transporter | — | — |
Not shown: 5 genomes with orthologs for CSW01_19480 only; 35 genomes with orthologs for CSW01_18085 only