| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_10260 | | thiol:disulfide interchange protein DsbE | 1.0 | CSW01_12735 | | RidA family protein | 0.82 | 20 |
| Escherichia coli ECOR27 | 0.69 | NOLOHH_14885 | dsbE | thiol:disulfide interchange protein DsbE | 0.81 | NOLOHH_04135 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 76 |
| Escherichia coli BW25113 | 0.69 | b2195 | ccmG | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | 0.81 | b4243 | yjgF | orf, hypothetical protein (VIMSS) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.69 | OHPLBJKB_01516 | | Thiol:disulfide interchange protein DsbE | 0.81 | OHPLBJKB_03791 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 74 |
| Escherichia coli ECRC99 | 0.69 | KEDOAH_04875 | dsbE | thiol:disulfide interchange protein DsbE | 0.81 | KEDOAH_16280 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | — | — |
| Escherichia coli ECRC62 | 0.69 | BNILDI_13805 | dsbE | thiol:disulfide interchange protein DsbE | 0.81 | BNILDI_07375 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 75 |
| Escherichia coli ECRC102 | 0.69 | NIAGMN_21075 | dsbE | thiol:disulfide interchange protein DsbE | 0.81 | NIAGMN_09725 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 80 |
| Escherichia coli BL21 | 0.69 | ECD_02122 | | periplasmic thioredoxin of cytochrome c-type biogenesis | 0.81 | ECD_04111 | | enamine/imine deaminase, reaction intermediate detoxification | low | > 61 |
| Escherichia coli Nissle 1917 | 0.69 | ECOLIN_RS12830 | | thiol:disulfide interchange protein DsbE | 0.81 | ECOLIN_RS24615 | | 2-iminobutanoate/2-iminopropanoate deaminase | — | — |
| Escherichia fergusonii Becca | 0.69 | EFB2_01661 | | Thiol:disulfide interchange protein DsbE | 0.81 | EFB2_04290 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 86 |
| Escherichia coli ECRC98 | 0.69 | JDDGAC_27270 | dsbE | thiol:disulfide interchange protein DsbE | 0.81 | JDDGAC_15515 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 87 |
| Escherichia coli ECRC101 | 0.69 | MCAODC_14360 | dsbE | thiol:disulfide interchange protein DsbE | 0.81 | MCAODC_02380 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 88 |
| Escherichia coli ECRC100 | 0.69 | OKFHMN_23310 | dsbE | thiol:disulfide interchange protein DsbE | 0.81 | OKFHMN_11875 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 79 |
| Escherichia coli ECOR38 | 0.68 | HEPCGN_22575 | dsbE | thiol:disulfide interchange protein DsbE | 0.81 | HEPCGN_10070 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 88 |
| Pantoea sp. MT58 | 0.67 | IAI47_06095 | | DsbE family thiol:disulfide interchange protein | 0.78 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.66 | PagCFBP13505_RS00050 | | DsbE family thiol:disulfide interchange protein | 0.77 | PagCFBP13505_RS08965 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 74 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_18080 | | DsbE family thiol:disulfide interchange protein | 0.69 | IAI46_02265 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 86 |
| Klebsiella pneumoniae MKP103 | 0.65 | KDGMDA_23840 | | DsbE family thiol:disulfide interchange protein | 0.78 | KDGMDA_11455 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 95 |
| Erwinia amylovora T8 | 0.63 | OLJFJH_11105 | | DsbE family thiol:disulfide interchange protein | 0.74 | OLJFJH_07320 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 58 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS09060 | | DsbE family thiol:disulfide interchange protein | 0.72 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.44 | 72 |
| Rahnella sp. WP5 | 0.62 | EX31_RS19740 | | DsbE family thiol:disulfide interchange protein | 0.74 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF4876 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.76 | GFF928 | | Endoribonuclease L-PSP | — | — |
| Marinobacter adhaerens HP15 | 0.49 | HP15_2280 | | periplasmic protein thiol: disulfide oxidoreductase DsbE | 0.43 | HP15_306 | | YjgF-like protein | — | — |
| Pseudomonas aeruginosa PA14 | 0.49 | IKLFDK_07045 | | thiol:disulfide interchange protein DsbE | 0.43 | IKLFDK_26760 | | reactive intermediate/imine deaminase | — | — |
| Pseudomonas sp. SVBP6 | 0.48 | COO64_RS25720 | | DsbE family thiol:disulfide interchange protein | 0.43 | COO64_RS01560 | | RidA family protein | — | — |
| Pseudomonas putida KT2440 | 0.48 | PP_4321 | | holocytochrome c synthetase subunit | 0.42 | PP_5303 | | aminoacrylate/iminopropionate hydrolase/deaminase | — | — |
| Pseudomonas sp. BP01 | 0.47 | JOY50_RS00475 | | DsbE family thiol:disulfide interchange protein | 0.42 | JOY50_RS08980 | | RidA family protein | — | — |
| Shewanella amazonensis SB2B | 0.47 | Sama_0249 | | thiol:disulfide interchange protein DsbE (RefSeq) | 0.39 | Sama_0263 | | YjgF-like protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.46 | SO0267 | dsbE | thiol:disulfide interchange protein DsbE (NCBI ptt file) | 0.39 | SO1404 | | endoribonuclease L-PSP, putative (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_0235 | | periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) | 0.41 | Shewana3_2971 | | putative endoribonuclease L-PSP (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.45 | Shew_0194 | | periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) | 0.41 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | — | — |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_1760 | | periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily | 0.41 | Psest_3818 | | endoribonuclease L-PSP, putative | — | — |
| Kangiella aquimarina DSM 16071 | 0.44 | B158DRAFT_1329 | | periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily | 0.39 | B158DRAFT_0573 | | endoribonuclease L-PSP, putative | low | > 40 |
| Pseudomonas segetis P6 | 0.43 | MPMX49_03106 | | Thiol:disulfide interchange protein DsbE | 0.42 | MPMX49_00037 | | 2-iminobutanoate/2-iminopropanoate deaminase | — | — |
| Pseudomonas sp. S08-1 | 0.42 | OH686_02630 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.40 | OH686_13545 | | RidA/YER057c/UK114 superfamily protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_3387 | | Periplasmic protein thiol:disulfide oxidoreductase DsbE | 0.42 | Psyr_0208 | | endoribonuclease L-PSP | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_3387 | | Periplasmic protein thiol:disulfide oxidoreductase DsbE | 0.42 | Psyr_0208 | | endoribonuclease L-PSP | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_18880 | | thiol:disulfide interchange protein | 0.43 | AO353_09285 | | reactive intermediate/imine deaminase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_03630 | | thiol:disulfide interchange protein | 0.43 | AO356_12475 | | reactive intermediate/imine deaminase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_2554 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.44 | Pf6N2E2_4360 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | — | — |
| Pseudomonas sp. DMC3 | 0.40 | GFF2491 | | Thiol:disulfide interchange protein DsbE | 0.43 | GFF420 | | 2-iminobutanoate/2-iminopropanoate deaminase | — | — |
| Pseudomonas lactucae CFBP13502 | 0.40 | GEMAOFIL_01876 | | Thiol:disulfide interchange protein DsbE | 0.42 | GEMAOFIL_00035 | | 2-iminobutanoate/2-iminopropanoate deaminase | — | — |
| Pseudomonas simiae WCS417 | 0.40 | PS417_08720 | | thiol:disulfide interchange protein | 0.42 | PS417_27835 | | endoribonuclease | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_4310 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.43 | PfGW456L13_779 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | — | — |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS08675 | | DsbE family thiol:disulfide interchange protein | 0.42 | PFLU_RS29515 | | RidA family protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS08675 | | DsbE family thiol:disulfide interchange protein | 0.42 | PFLU_RS29515 | | RidA family protein | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.40 | Pf1N1B4_3645 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.43 | Pf1N1B4_2112 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | — | — |
| Pseudomonas sp. RS175 | 0.38 | PFR28_00871 | | Thiol:disulfide interchange protein DsbE | 0.42 | PFR28_04425 | | 2-iminobutanoate/2-iminopropanoate deaminase | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.38 | LRK53_RS12735 | | DsbE family thiol:disulfide interchange protein | 0.40 | LRK53_RS16740 | | RidA family protein | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS16060 | | DsbE family thiol:disulfide interchange protein | 0.41 | LRK54_RS11800 | | RidA family protein | — | — |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS15810 | | DsbE family thiol:disulfide interchange protein | 0.41 | LRK55_RS11525 | | RidA family protein | — | — |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_08590 | bcp | DsbE family thiol:disulfide interchange protein | 0.41 | OKGIIK_12095 | ridA | reactive intermediate/imine deaminase | — | — |
| Alteromonas macleodii MIT1002 | 0.36 | MIT1002_00966 | | Cytochrome c biogenesis protein CcmG | 0.37 | MIT1002_00109 | | Putative reactive intermediate deaminase TdcF | — | — |
| Lysobacter sp. OAE881 | 0.36 | ABIE51_RS08695 | | DsbE family thiol:disulfide interchange protein | 0.47 | ABIE51_RS17260 | | RidA family protein | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.35 | ABZR86_RS06450 | | DsbE family thiol:disulfide interchange protein | 0.45 | ABZR86_RS11845 | | RidA family protein | — | — |
| Dechlorosoma suillum PS | 0.34 | Dsui_1173 | | thiol-disulfide isomerase-like thioredoxin | 0.37 | Dsui_0312 | | endoribonuclease L-PSP, putative | — | — |
| Dinoroseobacter shibae DFL-12 | 0.33 | Dshi_3410 | | periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) | 0.29 | Dshi_0720 | | Endoribonuclease L-PSP (RefSeq) | low | > 64 |
| Sinorhizobium meliloti 1021 | 0.33 | SMc03851 | | thiol:disulfide interchange protein (cytochrome C biogenesis protein) | 0.24 | SM_b21139 | | translation initiation inhibitors | — | — |
| Azospirillum brasilense Sp245 | 0.32 | AZOBR_RS00745 | | thiol oxidoreductase DsbE | 0.44 | AZOBR_RS32435 | | dfrA | — | — |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS18300 | | DsbE family thiol:disulfide interchange protein | 0.25 | ABIE40_RS21405 | | RidA family protein | low | > 107 |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_02534 | | Thiol:disulfide interchange protein DsbE | 0.26 | MPMX19_04018 | | 2-aminomuconate deaminase | — | — |
| Caulobacter crescentus NA1000 | 0.28 | CCNA_03788 | | thiol:disulfide interchange protein tlpA | 0.22 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.28 | CCNA_03788 | | thiol:disulfide interchange protein tlpA | 0.22 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | low | > 67 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_001070 | | DsbE family thiol:disulfide interchange protein | 0.20 | TX73_004470 | | RidA family protein | — | — |
| Sphingobium sp. HT1-2 | 0.27 | GFF84 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.27 | GFF1821 | | Putative aminoacrylate peracid reductase RutC @ RidA/YER057c/UK114 superfamily protein | — | — |
| Bosea sp. OAE506 | 0.26 | ABIE41_RS04995 | | DsbE family thiol:disulfide interchange protein | 0.19 | ABIE41_RS17300 | | RidA family protein | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_0171 | | Thiol-disulfide isomerase and thioredoxins | 0.20 | Ga0059261_1670 | | Putative translation initiation inhibitor, yjgF family | low | > 68 |
| Ralstonia solanacearum GMI1000 | 0.16 | RS_RS13925 | | alkyl hydroperoxide reductase | 0.29 | RS_RS23660 | | RidA family protein | — | — |
| Paraburkholderia graminis OAS925 | 0.16 | ABIE53_003565 | | thiol-disulfide isomerase/thioredoxin | 0.26 | ABIE53_004706 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 113 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.15 | GFF5187 | | Thiol:disulfide oxidoreductase TlpA | 0.27 | GFF3622 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | — | — |
| Fusobacterium nucleatum SB010 | 0.14 | HUW76_06500 | | TlpA family protein disulfide reductase | 0.47 | HUW76_10065 | | RidA family protein | low | > 35 |
Not shown: 5 genomes with orthologs for CSW01_10260 only; 40 genomes with orthologs for CSW01_12735 only