| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_10415 | | succinate--CoA ligase subunit alpha | 1.0 | CSW01_10270 | | cytochrome c-type biogenesis protein CcmE | 0.71 | 14 |
| Shewanella amazonensis SB2B | 0.92 | Sama_1430 | | succinyl-CoA synthetase alpha chain (RefSeq) | 0.65 | Sama_0241 | | cytochrome c-type biogenesis protein CcmE (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.91 | MIT1002_01951 | | Succinyl-CoA ligase [ADP-forming] subunit alpha | 0.62 | MIT1002_00964 | | Heme chaperone CcmE | — | — |
| Shewanella loihica PV-4 | 0.91 | Shew_1658 | | succinyl-CoA synthetase, alpha subunit (RefSeq) | 0.64 | Shew_0186 | | cytochrome c-type biogenesis protein CcmE (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.90 | Shewana3_1713 | | succinyl-CoA synthetase (ADP-forming) alpha subunit (RefSeq) | 0.63 | Shewana3_0227 | | cytochrome c-type biogenesis protein CcmE (RefSeq) | — | — |
| Pseudomonas sp. S08-1 | 0.90 | OH686_01950 | | Succinyl-CoA ligase [ADP-forming] alpha chain | 0.47 | OH686_02640 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
| Klebsiella pneumoniae MKP103 | 0.90 | KDGMDA_16745 | | succinate--CoA ligase subunit alpha | 0.51 | KDGMDA_23850 | | cytochrome c maturation protein CcmE | low | > 95 |
| Pseudomonas aeruginosa PA14 | 0.90 | IKLFDK_07610 | | succinate--CoA ligase subunit alpha | 0.45 | IKLFDK_07035 | | cytochrome c maturation protein CcmE | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.90 | DQ20_RS53710 | sucD;go_function=catalytic | succinate--CoA ligase subunit alpha | 0.45 | DQ20_RS47275 | ccmE;go_function=heme | cytochrome c maturation protein CcmE | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.90 | DY961_RS19595 | sucD;go_function=catalytic | succinate--CoA ligase subunit alpha | 0.45 | DY961_RS05515 | ccmE;go_function=heme | cytochrome c maturation protein CcmE | — | — |
| Shewanella oneidensis MR-1 | 0.90 | SO1933 | sucD | succinyl-CoA synthase, alpha subunit (NCBI ptt file) | 0.62 | SO0259 | ccmE | cytochrome c biogenesis protein CcmE (NCBI ptt file) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.90 | GFF4642 | | Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) | 0.56 | GFF4878 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
| Pseudomonas sp. SVBP6 | 0.89 | COO64_RS18915 | sucD | succinate--CoA ligase subunit alpha | 0.45 | COO64_RS25710 | ccmE | cytochrome c maturation protein CcmE | — | — |
| Marinobacter adhaerens HP15 | 0.88 | HP15_1525 | | succinyl-CoA synthetase, alpha subunit | 0.47 | HP15_2282 | | cytochrome c-type biogenesis protein CcmE | — | — |
| Pseudomonas segetis P6 | 0.88 | ACVTMO_RS11690 | sucD | succinate--CoA ligase subunit alpha | 0.45 | ACVTMO_RS15400 | ccmE | cytochrome c maturation protein CcmE | — | — |
| Pseudomonas stutzeri RCH2 | 0.88 | Psest_2490 | | succinyl-CoA synthetase, alpha subunit | 0.48 | Psest_1758 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Pseudomonas putida KT2440 | 0.88 | PP_4185 | | succinyl-CoA synthetase alpha subunit | 0.40 | PP_4323 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.88 | PagCFBP13505_RS03575 | | succinate--CoA ligase subunit alpha | 0.53 | PagCFBP13505_RS00040 | | cytochrome c maturation protein CcmE | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.88 | Psyr_2013 | | succinyl-CoA synthetase (ADP-forming) alpha subunit | 0.44 | Psyr_3389 | | CcmE/CycJ protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.88 | Psyr_2013 | | succinyl-CoA synthetase (ADP-forming) alpha subunit | 0.44 | Psyr_3389 | | CcmE/CycJ protein | — | — |
| Pantoea sp. MT58 | 0.88 | IAI47_13730 | | succinate--CoA ligase subunit alpha | 0.48 | IAI47_06085 | | cytochrome c maturation protein CcmE | — | — |
| Serratia liquefaciens MT49 | 0.88 | IAI46_06290 | | succinate--CoA ligase subunit alpha | 0.57 | IAI46_18090 | | cytochrome c maturation protein CcmE | low | > 87 |
| Escherichia coli ECOR27 | 0.88 | NOLOHH_23300 | sucD | succinate--CoA ligase subunit alpha | 0.58 | NOLOHH_14875 | ccmE | cytochrome c maturation protein CcmE | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.88 | OHPLBJKB_02988 | | Succinate--CoA ligase [ADP-forming] subunit alpha | 0.58 | OHPLBJKB_01514 | | Cytochrome c-type biogenesis protein CcmE | low | > 74 |
| Escherichia coli ECRC101 | 0.88 | MCAODC_26130 | sucD | succinate--CoA ligase subunit alpha | 0.58 | MCAODC_14350 | ccmE | cytochrome c maturation protein CcmE | low | > 87 |
| Escherichia coli ECRC100 | 0.88 | OKFHMN_06910 | sucD | succinate--CoA ligase subunit alpha | 0.58 | OKFHMN_23300 | ccmE | cytochrome c maturation protein CcmE | low | > 79 |
| Escherichia coli ECOR38 | 0.88 | HEPCGN_01320 | sucD | succinate--CoA ligase subunit alpha | 0.58 | HEPCGN_22565 | ccmE | cytochrome c maturation protein CcmE | low | > 88 |
| Escherichia coli Nissle 1917 | 0.88 | ECOLIN_RS03885 | | succinate--CoA ligase subunit alpha | 0.58 | ECOLIN_RS12840 | | cytochrome c maturation protein CcmE | — | — |
| Escherichia coli ECRC102 | 0.88 | NIAGMN_04960 | sucD | succinate--CoA ligase subunit alpha | 0.58 | NIAGMN_21065 | ccmE | cytochrome c maturation protein CcmE | low | > 80 |
| Escherichia coli ECRC62 | 0.88 | BNILDI_21295 | sucD | succinate--CoA ligase subunit alpha | 0.58 | BNILDI_13795 | ccmE | cytochrome c maturation protein CcmE | low | > 75 |
| Escherichia coli BL21 | 0.88 | ECD_00688 | | succinyl-CoA synthetase, NAD(P)-binding, alpha subunit | 0.58 | ECD_02124 | | periplasmic heme chaperone | low | > 61 |
| Escherichia coli ECRC99 | 0.88 | KEDOAH_21055 | sucD | succinate--CoA ligase subunit alpha | 0.58 | KEDOAH_04885 | ccmE | cytochrome c maturation protein CcmE | — | — |
| Escherichia coli BW25113 | 0.88 | b0729 | sucD | succinyl-CoA synthetase subunit alpha (NCBI) | 0.58 | b2197 | ccmE | periplasmic heme chaperone (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.88 | EFB2_03377 | | Succinate--CoA ligase [ADP-forming] subunit alpha | 0.58 | EFB2_01659 | | Cytochrome c-type biogenesis protein CcmE | low | > 86 |
| Kangiella aquimarina DSM 16071 | 0.87 | B158DRAFT_1427 | | succinyl-CoA synthetase, alpha subunit | 0.45 | B158DRAFT_1327 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Pseudomonas sp. RS175 | 0.87 | PFR28_03092 | | Succinate--CoA ligase [ADP-forming] subunit alpha | 0.47 | PFR28_00869 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Pseudomonas sp. DMC3 | 0.87 | GFF2524 | | Succinate--CoA ligase [ADP-forming] subunit alpha | 0.44 | GFF2489 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Escherichia coli ECRC98 | 0.87 | JDDGAC_10565 | sucD | succinate--CoA ligase subunit alpha | 0.58 | JDDGAC_27260 | ccmE | cytochrome c maturation protein CcmE | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.87 | Pf6N2E2_5859 | | Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) | 0.46 | Pf6N2E2_2556 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
| Pectobacterium carotovorum WPP14 | 0.87 | HER17_RS14915 | | succinate--CoA ligase subunit alpha | 0.53 | HER17_RS09050 | | cytochrome c maturation protein CcmE | low | > 75 |
| Pseudomonas fluorescens FW300-N1B4 | 0.87 | Pf1N1B4_3685 | | Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) | 0.46 | Pf1N1B4_3643 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.87 | PfGW456L13_4265 | | Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) | 0.46 | PfGW456L13_4312 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
| Erwinia amylovora T8 | 0.86 | OLJFJH_16935 | | succinate--CoA ligase subunit alpha | 0.54 | OLJFJH_11095 | | cytochrome c maturation protein CcmE | low | > 58 |
| Pseudomonas fluorescens FW300-N2C3 | 0.86 | AO356_19715 | | succinyl-CoA synthetase subunit alpha | 0.47 | AO356_03640 | | cytochrome C biogenesis protein CcmE | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.86 | AO353_01815 | | succinyl-CoA synthetase subunit alpha | 0.46 | AO353_18870 | | cytochrome C biogenesis protein CcmE | — | — |
| Pseudomonas fluorescens SBW25 | 0.86 | PFLU_RS08975 | | succinate--CoA ligase subunit alpha | 0.46 | PFLU_RS08665 | | cytochrome c maturation protein CcmE | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.86 | PFLU_RS08975 | | succinate--CoA ligase subunit alpha | 0.46 | PFLU_RS08665 | | cytochrome c maturation protein CcmE | — | — |
| Rahnella sp. WP5 | 0.86 | EX31_RS23455 | | succinate--CoA ligase subunit alpha | 0.58 | EX31_RS19750 | | cytochrome c maturation protein CcmE | low | > 89 |
| Pseudomonas lactucae CFBP13502 | 0.86 | GEMAOFIL_01913 | | Succinate--CoA ligase [ADP-forming] subunit alpha | 0.46 | GEMAOFIL_01874 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Pseudomonas orientalis W4I3 | 0.86 | QF045_RS11610 | | succinate--CoA ligase subunit alpha | 0.47 | QF045_RS11425 | | cytochrome c maturation protein CcmE | — | — |
| Pseudomonas simiae WCS417 | 0.86 | PS417_08915 | | succinyl-CoA synthetase subunit alpha | 0.46 | PS417_08710 | | cytochrome C biogenesis protein CcmE | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.73 | ABZR86_RS11020 | | succinate--CoA ligase subunit alpha | 0.38 | ABZR86_RS06440 | | cytochrome c maturation protein CcmE | — | — |
| Rhodanobacter sp. FW510-T8 | 0.72 | OKGIIK_01765 | sucD | succinate--CoA ligase subunit alpha | 0.35 | OKGIIK_08580 | ccmE | cytochrome c maturation protein CcmE | — | — |
| Rhodanobacter denitrificans MT42 | 0.72 | LRK55_RS04760 | | succinate--CoA ligase subunit alpha | 0.32 | LRK55_RS15820 | | cytochrome c maturation protein CcmE | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.72 | LRK54_RS04980 | | succinate--CoA ligase subunit alpha | 0.32 | LRK54_RS16070 | | cytochrome c maturation protein CcmE | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.71 | LRK53_RS05030 | | succinate--CoA ligase subunit alpha | 0.32 | LRK53_RS12725 | | cytochrome c maturation protein CcmE | — | — |
| Dinoroseobacter shibae DFL-12 | 0.69 | Dshi_2882 | | succinyl-CoA synthetase, alpha subunit (RefSeq) | 0.25 | Dshi_1758 | | CcmE/CycJ protein (RefSeq) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.68 | AMB_RS20035 | | succinate--CoA ligase subunit alpha | 0.37 | AMB_RS21245 | | cytochrome c-type biogenesis protein CcmE | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.67 | Xcc-8004.1356.1 | | Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) | 0.36 | Xcc-8004.3189.1 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
| Lysobacter sp. OAE881 | 0.67 | ABIE51_RS04865 | | succinate--CoA ligase subunit alpha | 0.37 | ABIE51_RS08705 | | cytochrome c maturation protein CcmE | — | — |
| Sphingobium sp. HT1-2 | 0.67 | GFF2449 | | Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) | 0.29 | GFF82 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
| Rhodospirillum rubrum S1H | 0.67 | Rru_A1212 | | Succinyl-CoA ligase, alpha subunit (NCBI) | 0.38 | Rru_A0036 | | CcmE/CycJ protein (NCBI) | — | — |
| Caulobacter crescentus NA1000 | 0.66 | CCNA_00341 | | succinyl-CoA synthetase alpha chain | 0.33 | CCNA_02849 | | cytochrome c-type biogenesis heme chaperone | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.66 | CCNA_00341 | | succinyl-CoA synthetase alpha chain | 0.33 | CCNA_02849 | | cytochrome c-type biogenesis heme chaperone | — | — |
| Rhodopseudomonas palustris CGA009 | 0.66 | TX73_000985 | | succinate--CoA ligase subunit alpha | 0.33 | TX73_009895 | | cytochrome c maturation protein CcmE | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.66 | Ga0059261_1340 | | succinyl-CoA synthetase, alpha subunit | 0.33 | Ga0059261_0173 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Phaeobacter inhibens DSM 17395 | 0.66 | PGA1_c03610 | | succinyl-CoA ligase [ADP-forming] subunit alpha | 0.31 | PGA1_c17040 | | cytochrome c-type biogenesis protein CcmE | — | — |
| Xanthobacter sp. DMC5 | 0.65 | GFF4409 | | Succinate--CoA ligase [ADP-forming] subunit alpha | 0.34 | GFF1778 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Azospirillum sp. SherDot2 | 0.65 | MPMX19_00105 | | Succinate--CoA ligase [ADP-forming] subunit alpha | 0.35 | MPMX19_02532 | | Cytochrome c-type biogenesis protein CcmE | — | — |
| Azospirillum brasilense Sp245 | 0.65 | AZOBR_RS14070 | | succinyl-CoA synthetase subsunit alpha | 0.32 | AZOBR_RS00735 | | cytochrome C biogenesis protein CcmE | — | — |
| Rhizobium sp. OAE497 | 0.62 | ABIE40_RS17990 | | succinate--CoA ligase subunit alpha | 0.30 | ABIE40_RS05680 | | cytochrome c maturation protein CcmE | — | — |
| Sinorhizobium meliloti 1021 | 0.60 | SMc02481 | | succinyl-CoA synthetase subunit alpha | 0.33 | SMc02362 | | cytochrome c-type biogenesis protein CcmE | — | — |
| Agrobacterium fabrum C58 | 0.59 | Atu2637 | | succinyl-CoA synthetase alpha chain | 0.33 | Atu0974 | | cytochrome-c biosynthesis heme-carrier protein cycJ | — | — |
| Dechlorosoma suillum PS | 0.55 | Dsui_1446 | | succinyl-CoA synthetase, alpha subunit | 0.38 | Dsui_1171 | | cytochrome c-type biogenesis protein CcmE | low | > 51 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.53 | A4249_RS14425 | | succinate--CoA ligase subunit alpha | 0.35 | A4249_RS10830 | | cytochrome c maturation protein CcmE | — | — |
Not shown: 41 genomes with orthologs for CSW01_10415 only; 0 genomes with orthologs for CSW01_10270 only