Conservation of cofitness between CSW01_10270 and CSW01_10265 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10270 cytochrome c-type biogenesis protein CcmE 1.0 CSW01_10265 c-type cytochrome biogenesis protein CcmF 0.88 9
Shewanella amazonensis SB2B 0.65 Sama_0241 cytochrome c-type biogenesis protein CcmE (RefSeq) 0.51 Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) 0.90 3
Shewanella loihica PV-4 0.64 Shew_0186 cytochrome c-type biogenesis protein CcmE (RefSeq) 0.51 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) — —
Shewanella sp. ANA-3 0.63 Shewana3_0227 cytochrome c-type biogenesis protein CcmE (RefSeq) 0.50 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) 0.95 3
Shewanella oneidensis MR-1 0.62 SO0259 ccmE cytochrome c biogenesis protein CcmE (NCBI ptt file) 0.49 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) 0.80 1
Alteromonas macleodii MIT1002 0.62 MIT1002_00964 Heme chaperone CcmE 0.56 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF — —
Rahnella sp. WP5 0.58 EX31_RS19750 cytochrome c maturation protein CcmE 0.67 EX31_RS19745 heme lyase CcmF/NrfE family subunit low > 89
Escherichia coli ECRC101 0.58 MCAODC_14350 ccmE cytochrome c maturation protein CcmE 0.60 MCAODC_14355 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 88
Escherichia coli ECOR38 0.58 HEPCGN_22565 ccmE cytochrome c maturation protein CcmE 0.60 HEPCGN_22570 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 88
Escherichia coli Nissle 1917 0.58 ECOLIN_RS12840 cytochrome c maturation protein CcmE 0.60 ECOLIN_RS12835 cytochrome c-type biogenesis heme lyase CcmF — —
Escherichia coli ECOR27 0.58 NOLOHH_14875 ccmE cytochrome c maturation protein CcmE 0.60 NOLOHH_14880 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 76
Escherichia coli ECRC102 0.58 NIAGMN_21065 ccmE cytochrome c maturation protein CcmE 0.60 NIAGMN_21070 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 80
Escherichia fergusonii Becca 0.58 EFB2_01659 Cytochrome c-type biogenesis protein CcmE 0.60 EFB2_01660 Cytochrome c-type biogenesis protein CcmF low > 86
Escherichia coli ECRC100 0.58 OKFHMN_23300 ccmE cytochrome c maturation protein CcmE 0.60 OKFHMN_23305 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 79
Escherichia coli ECRC99 0.58 KEDOAH_04885 ccmE cytochrome c maturation protein CcmE 0.60 KEDOAH_04880 ccmF cytochrome c-type biogenesis heme lyase CcmF — —
Escherichia coli BL21 0.58 ECD_02124 periplasmic heme chaperone 0.60 ECD_02123 heme lyase, CcmF subunit low > 61
Escherichia coli ECRC98 0.58 JDDGAC_27260 ccmE cytochrome c maturation protein CcmE 0.60 JDDGAC_27265 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_01514 Cytochrome c-type biogenesis protein CcmE 0.60 OHPLBJKB_01515 Cytochrome c-type biogenesis protein CcmF low > 74
Escherichia coli ECRC62 0.58 BNILDI_13795 ccmE cytochrome c maturation protein CcmE 0.60 BNILDI_13800 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 75
Escherichia coli BW25113 0.58 b2197 ccmE periplasmic heme chaperone (NCBI) 0.60 b2196 ccmF heme lyase, CcmF subunit (NCBI) low > 76
Serratia liquefaciens MT49 0.57 IAI46_18090 cytochrome c maturation protein CcmE 0.65 IAI46_18085 heme lyase CcmF/NrfE family subunit low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF4878 Cytochrome c-type biogenesis protein CcmE, heme chaperone 0.58 GFF4877 Cytochrome c heme lyase subunit CcmF — —
Erwinia amylovora T8 0.54 OLJFJH_11095 cytochrome c maturation protein CcmE 0.63 OLJFJH_11100 heme lyase NrfEFG subunit NrfE low > 58
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS00040 cytochrome c maturation protein CcmE 0.64 PagCFBP13505_RS00045 heme lyase CcmF/NrfE family subunit low > 74
Pectobacterium carotovorum WPP14 0.53 HER17_RS09050 cytochrome c maturation protein CcmE 0.63 HER17_RS09055 heme lyase CcmF/NrfE family subunit low > 75
Klebsiella pneumoniae MKP103 0.51 KDGMDA_23850 cytochrome c maturation protein CcmE 0.62 KDGMDA_23845 cytochrome c maturation protein CcmE low > 95
Pantoea sp. MT58 0.48 IAI47_06085 cytochrome c maturation protein CcmE 0.65 IAI47_06090 heme lyase CcmF/NrfE family subunit 0.54 1
Pseudomonas stutzeri RCH2 0.48 Psest_1758 Cytochrome c-type biogenesis protein CcmE 0.51 Psest_1759 c-type cytochrome biogenesis protein CcmF — —
Pseudomonas sp. RS175 0.47 PFR28_00869 Cytochrome c-type biogenesis protein CcmE 0.52 PFR28_00870 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas sp. S08-1 0.47 OH686_02640 Cytochrome c-type biogenesis protein CcmE, heme chaperone 0.51 OH686_02635 cytochrome c-type biogenesis protein CcmF — —
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03640 cytochrome C biogenesis protein CcmE 0.52 AO356_03635 cytochrome C biogenesis protein CcmF — —
Marinobacter adhaerens HP15 0.47 HP15_2282 cytochrome c-type biogenesis protein CcmE 0.51 HP15_2281 cytochrome c assembly protein — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS08665 cytochrome c maturation protein CcmE 0.51 PFLU_RS08670 heme lyase CcmF/NrfE family subunit 0.75 2
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS08665 cytochrome c maturation protein CcmE 0.51 PFLU_RS08670 heme lyase CcmF/NrfE family subunit 0.93 1
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_18870 cytochrome C biogenesis protein CcmE 0.51 AO353_18875 cytochrome C biogenesis protein CcmF — —
Pseudomonas simiae WCS417 0.46 PS417_08710 cytochrome C biogenesis protein CcmE 0.52 PS417_08715 cytochrome C biogenesis protein CcmF — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4312 Cytochrome c-type biogenesis protein CcmE, heme chaperone 0.53 PfGW456L13_4311 Cytochrome c heme lyase subunit CcmF — —
Pseudomonas lactucae CFBP13502 0.46 GEMAOFIL_01874 Cytochrome c-type biogenesis protein CcmE 0.51 GEMAOFIL_01875 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_3643 Cytochrome c-type biogenesis protein CcmE, heme chaperone 0.51 Pf1N1B4_3644 Cytochrome c heme lyase subunit CcmF — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_2556 Cytochrome c-type biogenesis protein CcmE, heme chaperone 0.51 Pf6N2E2_2555 Cytochrome c heme lyase subunit CcmF — —
Pseudomonas aeruginosa PA14 0.45 IKLFDK_07035 cytochrome c maturation protein CcmE 0.49 IKLFDK_07040 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas segetis P6 0.45 MPMX49_03108 Cytochrome c-type biogenesis protein CcmE 0.55 MPMX49_03107 Cytochrome c-type biogenesis protein CcmF — —
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_1327 Cytochrome c-type biogenesis protein CcmE 0.54 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF 0.98 1
Pseudomonas sp. SVBP6 0.45 COO64_RS25710 ccmE cytochrome c maturation protein CcmE 0.50 COO64_RS25715 heme lyase CcmF/NrfE family subunit — —
Pseudomonas sp. DMC3 0.44 GFF2489 Cytochrome c-type biogenesis protein CcmE 0.51 GFF2490 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3389 CcmE/CycJ protein 0.52 Psyr_3388 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3389 CcmE/CycJ protein 0.52 Psyr_3388 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas putida KT2440 0.40 PP_4323 Cytochrome c-type biogenesis protein CcmE 0.50 PP_4322 holocytochrome c synthetase — —
Rhodospirillum rubrum S1H 0.38 Rru_A0036 CcmE/CycJ protein (NCBI) 0.43 Rru_A0035 Cytochrome c-type biogenesis protein CcmF (NCBI) — —
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS06440 cytochrome c maturation protein CcmE 0.48 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit — —
Dechlorosoma suillum PS 0.38 Dsui_1171 cytochrome c-type biogenesis protein CcmE 0.53 Dsui_1172 c-type cytochrome biogenesis protein CcmF — —
Lysobacter sp. OAE881 0.37 ABIE51_RS08705 cytochrome c maturation protein CcmE 0.48 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit 0.97 2
Magnetospirillum magneticum AMB-1 0.37 AMB_RS21245 cytochrome c-type biogenesis protein CcmE 0.47 AMB_RS21250 heme lyase CcmF/NrfE family subunit — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3189.1 Cytochrome c-type biogenesis protein CcmE, heme chaperone 0.47 Xcc-8004.3190.1 Cytochrome c heme lyase subunit CcmF low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS10830 cytochrome c maturation protein CcmE 0.34 A4249_RS10825 heme lyase CcmF/NrfE family subunit — —
Azospirillum sp. SherDot2 0.35 MPMX19_02532 Cytochrome c-type biogenesis protein CcmE 0.45 MPMX19_02533 Cytochrome c-type biogenesis protein CcmF — —
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_08580 ccmE cytochrome c maturation protein CcmE 0.46 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF — —
Xanthobacter sp. DMC5 0.34 GFF1778 Cytochrome c-type biogenesis protein CcmE 0.41 GFF1779 Cytochrome c-type biogenesis protein CcmF — —
Rhodopseudomonas palustris CGA009 0.33 TX73_009895 cytochrome c maturation protein CcmE 0.44 TX73_009900 heme lyase CcmF/NrfE family subunit — —
Agrobacterium fabrum C58 0.33 Atu0974 cytochrome-c biosynthesis heme-carrier protein cycJ 0.44 Atu0975 cytochrome c-type synthesis protein — —
Sinorhizobium meliloti 1021 0.33 SMc02362 cytochrome c-type biogenesis protein CcmE 0.42 SMc02363 cytochrome C-type biogenesis transmembrane protein 0.27 82
Caulobacter crescentus NA1000 0.33 CCNA_02849 cytochrome c-type biogenesis heme chaperone 0.38 CCNA_02848 heme chaperone-apocytochrome heme-lyase 0.89 2
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_02849 cytochrome c-type biogenesis heme chaperone 0.38 CCNA_02848 heme chaperone-apocytochrome heme-lyase low > 67
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_0173 Cytochrome c-type biogenesis protein CcmE 0.30 Ga0059261_0172 Cytochrome c biogenesis factor — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS00735 cytochrome C biogenesis protein CcmE 0.45 AZOBR_RS00740 heme lyase subunit CcmF — —
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS16070 cytochrome c maturation protein CcmE 0.48 LRK54_RS16065 heme lyase CcmF/NrfE family subunit — —
Rhodanobacter sp000427505 FW510-R12 0.32 LRK53_RS12725 cytochrome c maturation protein CcmE 0.45 LRK53_RS12730 heme lyase CcmF/NrfE family subunit — —
Rhodanobacter denitrificans MT42 0.32 LRK55_RS15820 cytochrome c maturation protein CcmE 0.48 LRK55_RS15815 heme lyase CcmF/NrfE family subunit — —
Phaeobacter inhibens DSM 17395 0.31 PGA1_c17040 cytochrome c-type biogenesis protein CcmE 0.41 PGA1_c17010 cytochrome c-type biogenesis protein CcmF — —
Rhizobium sp. OAE497 0.30 ABIE40_RS05680 cytochrome c maturation protein CcmE 0.43 ABIE40_RS05685 heme lyase CcmF/NrfE family subunit 0.92 2
Sphingobium sp. HT1-2 0.29 GFF82 Cytochrome c-type biogenesis protein CcmE, heme chaperone 0.36 GFF83 Cytochrome c heme lyase subunit CcmF — —
Dinoroseobacter shibae DFL-12 0.25 Dshi_1758 CcmE/CycJ protein (RefSeq) 0.44 Dshi_4051 cytochrome c-type biogenesis protein CcmF (RefSeq) — —

Not shown: 0 genomes with orthologs for CSW01_10270 only; 4 genomes with orthologs for CSW01_10265 only