Conservation of cofitness between CSW01_01850 and CSW01_09385 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01850 protease modulator HflC 1.0 CSW01_09385 hypothetical protein 0.43 17
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_06850 hflC protease modulator HflC 0.71 IJEDHG_22595 yeaH UPF0229 protein ETA_15540 low > 61
Serratia liquefaciens MT49 0.51 IAI46_01640 protease modulator HflC 0.75 IAI46_14380 YeaH/YhbH family protein low > 86
Pantoea agglomerans CFBP13505 P0401 0.51 PagCFBP13505_RS11200 protease modulator HflC 0.73 PagCFBP13505_RS02755 YeaH/YhbH family protein low > 74
Enterobacter sp. TBS_079 0.51 MPMX20_00456 Modulator of FtsH protease HflC 0.74 MPMX20_01839 hypothetical protein low > 85
Shewanella oneidensis MR-1 0.50 SO0606 hflC hflC protein (NCBI ptt file) 0.68 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03867 Modulator of FtsH protease HflC 0.75 OHPLBJKB_01948 hypothetical protein low > 74
Escherichia coli ECRC102 0.50 NIAGMN_10090 hflC protease modulator HflC 0.75 NIAGMN_01360 yeaH UPF0229 protein YeaH low > 80
Escherichia coli ECRC101 0.50 MCAODC_02755 hflC protease modulator HflC 0.75 MCAODC_18705 yeaH UPF0229 protein YeaH low > 88
Escherichia coli ECRC62 0.50 BNILDI_06985 hflC protease modulator HflC 0.75 BNILDI_16020 yeaH UPF0229 protein YeaH low > 75
Escherichia fergusonii Becca 0.50 EFB2_04360 Modulator of FtsH protease HflC 0.75 EFB2_02210 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS24245 protease modulator HflC 0.75 ECOLIN_RS09945 YeaH/YhbH family protein — —
Escherichia coli ECOR27 0.50 NOLOHH_04505 hflC protease modulator HflC 0.75 NOLOHH_17235 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC99 0.50 KEDOAH_15915 hflC protease modulator HflC 0.75 KEDOAH_01405 yeaH UPF0229 protein YeaH — —
Escherichia coli ECOR38 0.50 HEPCGN_10470 hflC protease modulator HflC 0.75 HEPCGN_05095 yeaH UPF0229 protein YeaH low > 88
Escherichia coli BL21 0.50 ECD_04042 HflB protease modulator specific for phage lambda cII repressor 0.75 ECD_01753 UPF0229 family protein — —
Escherichia coli ECRC98 0.50 JDDGAC_15880 hflC protease modulator HflC 0.75 JDDGAC_01280 yeaH UPF0229 protein YeaH low > 87
Escherichia coli ECRC100 0.50 OKFHMN_12240 hflC protease modulator HflC 0.75 OKFHMN_26705 yeaH UPF0229 protein YeaH low > 79
Escherichia coli BW25113 0.50 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.75 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Alteromonas macleodii MIT1002 0.50 MIT1002_03785 Modulator of FtsH protease HflC 0.69 MIT1002_01232 hypothetical protein low > 70
Pantoea sp. MT58 0.50 IAI47_02605 protease modulator HflC 0.73 IAI47_08920 YeaH/YhbH family protein low > 76
Klebsiella pneumoniae MKP103 0.50 KDGMDA_11050 protease modulator HflC 0.76 KDGMDA_19155 UPF0229 protein KPK_3252 low > 95
Erwinia tracheiphila SCR3 0.50 LU632_RS02070 hflC protease modulator HflC 0.71 LU632_RS13015 YeaH/YhbH family protein low > 74
Shewanella sp. ANA-3 0.50 Shewana3_0600 HflC protein (RefSeq) 0.65 Shewana3_1637 hypothetical protein (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF828 HflC protein 0.74 GFF3472 UPF0229 protein YeaH low > 78
Pectobacterium carotovorum WPP14 0.50 HER17_RS02600 protease modulator HflC 0.73 HER17_RS11155 YeaH/YhbH family protein low > 75
Klebsiella michiganensis M5al 0.50 BWI76_RS02550 protease modulator HflC 0.75 BWI76_RS11480 hypothetical protein low > 92
Shewanella loihica PV-4 0.49 Shew_0569 HflC protein (RefSeq) 0.66 Shew_1832 hypothetical protein (RefSeq) low > 60
Erwinia amylovora T8 0.49 OLJFJH_02485 protease modulator HflC 0.72 OLJFJH_13195 UPF0229 protein ETA_15540 low > 58
Rahnella sp. WP5 0.49 EX31_RS08805 protease modulator HflC 0.73 EX31_RS06255 YeaH/YhbH family protein low > 89
Dickeya dianthicola ME23 0.49 DZA65_RS19665 protease modulator HflC 0.71 DZA65_RS10725 YeaH/YhbH family protein low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS18530 protease modulator HflC 0.72 HGI48_RS10250 YeaH/YhbH family protein low > 71
Shewanella amazonensis SB2B 0.49 Sama_3022 hflC protein (RefSeq) 0.66 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 62
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3372 HflC protein 0.74 EX28DRAFT_1777 Uncharacterized conserved protein low > 76
Dickeya dadantii 3937 0.48 DDA3937_RS18595 protease modulator HflC 0.71 DDA3937_RS10240 YeaH/YhbH family protein — —
Marinobacter adhaerens HP15 0.36 HP15_2496 HflC 0.55 HP15_2934 protein YeaH low > 73
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_0575 protease FtsH subunit HflC 0.56 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_0575 protease FtsH subunit HflC 0.56 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1409 HflC protein 0.56 Pf1N1B4_2522 FIG002076: hypothetical protein — —
Pseudomonas sp. SVBP6 0.33 COO64_RS17915 hflC protease modulator HflC 0.58 COO64_RS22535 YeaH/YhbH family protein low > 93
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_151 HflC protein 0.56 PfGW456L13_1195 FIG002076: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_13160 membrane protease HflC 0.56 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_3611 HflC protein 0.57 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_08640 membrane protease HflC 0.57 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 104
Pseudomonas aeruginosa PA14 0.32 IKLFDK_28835 protease modulator HflC 0.59 IKLFDK_22475 UPF0229 protein PA14_07660 — —
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_00739 Modulator of FtsH protease HflC 0.57 GEMAOFIL_05287 hypothetical protein low > 93
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS02585 protease modulator HflC 0.57 PFLU_RS27490 YeaH/YhbH family protein low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS02585 protease modulator HflC 0.57 PFLU_RS27490 YeaH/YhbH family protein low > 109
Pseudomonas sp. DMC3 0.32 GFF3223 Modulator of FtsH protease HflC 0.57 GFF42 hypothetical protein low > 89
Pseudomonas sp. BP01 0.31 JOY50_RS17245 hflC protease modulator HflC 0.58 JOY50_RS18115 YeaH/YhbH family protein low > 84
Pseudomonas stutzeri RCH2 0.31 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs 0.57 Psest_3673 Uncharacterized conserved protein — —
Pseudomonas putida KT2440 0.31 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.57 PP_0396 conserved protein of unknown function 0.31 35
Pseudomonas sp. S08-1 0.31 OH686_09455 HflC protein 0.57 OH686_15015 UPF0229 protein YeaH low > 80
Pseudomonas sp. RS175 0.30 PFR28_05124 Modulator of FtsH protease HflC 0.57 PFR28_04069 hypothetical protein low > 88
Pseudomonas segetis P6 0.30 MPMX49_04150 Modulator of FtsH protease HflC 0.57 MPMX49_00874 hypothetical protein low > 75
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS14760 membrane protein 0.54 HSERO_RS21695 hypothetical protein 0.48 9
Pseudomonas simiae WCS417 0.29 PS417_02505 membane protease HflC 0.56 PS417_25835 hypothetical protein — —
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS13100 membrane protein 0.52 RR42_RS36480 hypothetical protein — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS10955 protease modulator HflC 0.52 ABZR87_RS14215 YeaH/YhbH family protein low > 80
Magnetospirillum magneticum AMB-1 0.28 AMB_RS17655 protease modulator HflC 0.46 AMB_RS10890 hypothetical protein — —
Phaeobacter inhibens DSM 17395 0.28 PGA1_c23700 protein HflC 0.44 PGA1_c02480 Uncharacterized conserved protein low > 62
Acidovorax sp. GW101-3H11 0.26 Ac3H11_1802 HflC protein 0.53 Ac3H11_1146 FIG002076: hypothetical protein low > 79
Azospirillum sp. SherDot2 0.26 MPMX19_01250 Modulator of FtsH protease HflC 0.45 MPMX19_02156 hypothetical protein — —
Variovorax sp. OAS795 0.25 ABID97_RS14265 protease modulator HflC 0.51 ABID97_RS10265 YeaH/YhbH family protein low > 91
Variovorax sp. SCN45 0.25 GFF1003 HflC protein 0.52 GFF2934 FIG002076: hypothetical protein low > 127
Azospirillum brasilense Sp245 0.24 AZOBR_RS06525 membrane protein 0.43 AZOBR_RS12650 hypothetical protein low > 97
Paraburkholderia graminis OAS925 0.21 ABIE53_002734 membrane protease subunit HflC 0.52 ABIE53_002317 uncharacterized sporulation protein YeaH/YhbH (DUF444 family) 0.31 54
Sinorhizobium meliloti 1021 0.21 SMc01440 hydrolase serine protease transmembrane protein 0.41 SMc01266 hypothetical protein low > 103
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_00524 protease FtsH subunit HflC 0.52 H281DRAFT_05233 hypothetical protein — —
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS06015 protease modulator HflC 0.51 QEN71_RS07380 YeaH/YhbH family protein low > 153
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS12540 membrane protein 0.51 BPHYT_RS11185 hypothetical protein — —
Rhizobium sp. OAE497 0.19 ABIE40_RS11530 protease modulator HflC 0.39 ABIE40_RS12545 YeaH/YhbH family protein low > 107

Not shown: 27 genomes with orthologs for CSW01_01850 only; 1 genomes with orthologs for CSW01_09385 only