| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03705 | | chaperone protein ClpB | 1.0 | CSW01_09380 | | PrkA family serine protein kinase | 0.54 | 9 |
| Shewanella amazonensis SB2B | 0.80 | Sama_2603 | | clpB protein (RefSeq) | 0.88 | Sama_1921 | | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.80 | SO3577 | clpB | clpB protein (NCBI ptt file) | 0.87 | SO2882 | | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 76 |
| Shewanella sp. ANA-3 | 0.80 | Shewana3_3169 | | ATPase (RefSeq) | 0.87 | Shewana3_1638 | | putative serine protein kinase, PrkA (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.80 | Shew_2948 | | ATPase (RefSeq) | 0.87 | Shew_1833 | | putative serine protein kinase, PrkA (RefSeq) | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.78 | GFF4184 | | ClpB protein | 0.88 | GFF3473 | | Serine protein kinase (prkA protein), P-loop containing | low | > 78 |
| Alteromonas macleodii MIT1002 | 0.78 | MIT1002_02677 | | Heat shock protein F84.1 | 0.85 | MIT1002_01233 | | PrkA family serine protein kinase | low | > 70 |
| Enterobacter asburiae PDN3 | 0.78 | EX28DRAFT_2693 | | ATP-dependent chaperone ClpB | 0.87 | EX28DRAFT_1776 | | putative serine protein kinase, PrkA | low | > 76 |
| Enterobacter sp. TBS_079 | 0.78 | MPMX20_03461 | | Chaperone protein ClpB | 0.87 | MPMX20_01840 | | hypothetical protein | low | > 85 |
| Dickeya dianthicola ME23 | 0.78 | DZA65_RS17320 | | ATP-dependent chaperone ClpB | 0.86 | DZA65_RS10730 | | PrkA family serine protein kinase | low | > 75 |
| Escherichia coli ECRC62 | 0.78 | BNILDI_11745 | clpB | ATP-dependent chaperone ClpB | 0.88 | BNILDI_16025 | yeaG | protein kinase YeaG | low | > 75 |
| Klebsiella michiganensis M5al | 0.78 | BWI76_RS21440 | | ATP-dependent chaperone ClpB | 0.87 | BWI76_RS11485 | | serine protein kinase PrkA | low | > 92 |
| Escherichia coli ECRC101 | 0.78 | MCAODC_11795 | clpB | ATP-dependent chaperone ClpB | 0.88 | MCAODC_18700 | yeaG | protein kinase YeaG | low | > 87 |
| Escherichia coli ECRC100 | 0.78 | OKFHMN_21265 | clpB | ATP-dependent chaperone ClpB | 0.88 | OKFHMN_26710 | yeaG | protein kinase YeaG | low | > 79 |
| Escherichia coli BL21 | 0.78 | ECD_02482 | | protein disaggregation chaperone | 0.83 | ECD_01752 | | protein kinase, endogenous substrate unidentified; autokinase | low | > 61 |
| Escherichia coli ECOR38 | 0.78 | HEPCGN_20390 | clpB | ATP-dependent chaperone ClpB | 0.88 | HEPCGN_05100 | yeaG | protein kinase YeaG | low | > 88 |
| Escherichia coli ECRC98 | 0.78 | JDDGAC_24930 | clpB | ATP-dependent chaperone ClpB | 0.88 | JDDGAC_01285 | yeaG | protein kinase YeaG | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_01114 | | Chaperone protein ClpB | 0.88 | OHPLBJKB_01949 | | hypothetical protein | low | > 74 |
| Escherichia fergusonii Becca | 0.78 | EFB2_01298 | | Chaperone protein ClpB | 0.88 | EFB2_02211 | | hypothetical protein | low | > 86 |
| Escherichia coli ECOR27 | 0.78 | NOLOHH_12940 | clpB | ATP-dependent chaperone ClpB | 0.88 | NOLOHH_17240 | yeaG | protein kinase YeaG | low | > 76 |
| Escherichia coli ECRC102 | 0.78 | NIAGMN_19035 | clpB | ATP-dependent chaperone ClpB | 0.88 | NIAGMN_01355 | yeaG | protein kinase YeaG | low | > 80 |
| Klebsiella pneumoniae MKP103 | 0.78 | KDGMDA_02125 | | ATP-dependent chaperone ClpB | 0.87 | KDGMDA_19160 | | protein kinase YeaG | low | > 95 |
| Escherichia coli ECRC99 | 0.78 | KEDOAH_06955 | clpB | ATP-dependent chaperone ClpB | 0.88 | KEDOAH_01400 | yeaG | protein kinase YeaG | — | — |
| Escherichia coli BW25113 | 0.78 | b2592 | clpB | protein disaggregation chaperone (NCBI) | 0.88 | b1783 | yeaG | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.78 | ECOLIN_RS14665 | | ATP-dependent chaperone ClpB | 0.88 | ECOLIN_RS09940 | | protein kinase YeaG | — | — |
| Dickeya dianthicola 67-19 | 0.78 | HGI48_RS16225 | | ATP-dependent chaperone ClpB | 0.85 | HGI48_RS10255 | | PrkA family serine protein kinase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.77 | HER17_RS05410 | | ATP-dependent chaperone ClpB | 0.87 | HER17_RS11150 | | protein kinase YeaG | low | > 75 |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS16100 | | ATP-dependent chaperone ClpB | 0.86 | DDA3937_RS10245 | | PrkA family serine protein kinase | low | > 74 |
| Serratia liquefaciens MT49 | 0.77 | IAI46_03995 | | ATP-dependent chaperone ClpB | 0.87 | IAI46_14375 | | protein kinase YeaG | 0.69 | 40 |
| Pantoea agglomerans CFBP13505 P0401 | 0.77 | PagCFBP13505_RS16530 | | ATP-dependent chaperone ClpB | 0.86 | PagCFBP13505_RS02760 | | PrkA family serine protein kinase | low | > 74 |
| Pantoea sp. MT58 | 0.77 | IAI47_04435 | | ATP-dependent chaperone ClpB | 0.86 | IAI47_08925 | | protein kinase YeaG | low | > 76 |
| Rahnella sp. WP5 | 0.76 | EX31_RS07560 | | ATP-dependent chaperone ClpB | 0.86 | EX31_RS06260 | | protein kinase YeaG | low | > 89 |
| Erwinia amylovora T8 | 0.76 | OLJFJH_09740 | | ATP-dependent chaperone ClpB | 0.86 | OLJFJH_13200 | | protein kinase YeaG | low | > 58 |
| Erwinia tracheiphila HP pepo 2.2 | 0.76 | IJEDHG_26855 | clpB | ATP-dependent chaperone ClpB | 0.86 | IJEDHG_22600 | yeaG | protein kinase YeaG | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.76 | LU632_RS16935 | clpB | ATP-dependent chaperone ClpB | 0.86 | LU632_RS13010 | yeaG | PrkA family serine protein kinase | low | > 73 |
| Marinobacter adhaerens HP15 | 0.74 | HP15_529 | | protein disaggregation chaperone | 0.77 | HP15_2933 | | serine protein kinase, PrkA | low | > 73 |
| Pseudomonas sp. SVBP6 | 0.72 | COO64_RS11065 | clpB | ATP-dependent chaperone ClpB | 0.79 | COO64_RS22530 | | PrkA family serine protein kinase | low | > 93 |
| Pseudomonas sp. RS175 | 0.71 | PFR28_03746 | | Chaperone protein ClpB | 0.78 | PFR28_04068 | | hypothetical protein | 0.47 | 18 |
| Pseudomonas fluorescens FW300-N2C3 | 0.71 | AO356_15935 | | ATP-dependent chaperone ClpB | 0.78 | AO356_14315 | | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_5129 | | ClpB protein | 0.78 | Pf6N2E2_4801 | | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.71 | Pf1N1B4_2824 | | ClpB protein | 0.78 | Pf1N1B4_2523 | | Serine protein kinase (prkA protein), P-loop containing | low | > 87 |
| Pseudomonas orientalis W4I3 | 0.71 | QF045_RS06815 | | ATP-dependent chaperone ClpB | 0.78 | QF045_RS00230 | | PrkA family serine protein kinase | low | > 93 |
| Pseudomonas sp. S08-1 | 0.71 | OH686_16420 | | ATP-dependent chaperone protein ClpB | 0.79 | OH686_15020 | | Uncharacterized protein YeaG | low | > 80 |
| Pseudomonas lactucae CFBP13502 | 0.71 | GEMAOFIL_00971 | | Chaperone protein ClpB | 0.77 | GEMAOFIL_05286 | | hypothetical protein | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.71 | PFLU_RS03880 | | ATP-dependent chaperone ClpB | 0.77 | PFLU_RS27485 | | PrkA family serine protein kinase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.71 | PFLU_RS03880 | | ATP-dependent chaperone ClpB | 0.77 | PFLU_RS27485 | | PrkA family serine protein kinase | low | > 109 |
| Pseudomonas aeruginosa PUPa3 | 0.71 | DQ20_RS56205 | clpB;go_function=ATP | ATP-dependent chaperone ClpB | 0.77 | DQ20_RS36380 | | PrkA family serine protein kinase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.71 | PS417_03830 | | protein disaggregation chaperone | 0.78 | PS417_25830 | | serine/threonine protein kinase | low | > 88 |
| Pseudomonas aeruginosa PA14 | 0.71 | IKLFDK_00820 | | Chaperone protein ClpB | 0.77 | IKLFDK_22470 | | PrkA family serine protein kinase | low | > 98 |
| Pseudomonas stutzeri RCH2 | 0.71 | Psest_0711 | | ATP-dependent chaperone ClpB | 0.79 | Psest_3672 | | Putative Ser protein kinase | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.71 | PfGW456L13_1495 | | ClpB protein | 0.78 | PfGW456L13_1196 | | Serine protein kinase (prkA protein), P-loop containing | low | > 87 |
| Pseudomonas aeruginosa MRSN321 | 0.71 | DY961_RS23740 | clpB;go_function=ATP | ATP-dependent chaperone ClpB | 0.77 | DY961_RS22965 | | PrkA family serine protein kinase | low | > 100 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.70 | Psyr_0728 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | 0.79 | Psyr_4631 | | PrkA serine kinase | 0.41 | 68 |
| Pseudomonas syringae pv. syringae B728a | 0.70 | Psyr_0728 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | 0.79 | Psyr_4631 | | PrkA serine kinase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.70 | AO353_14230 | | ATP-dependent chaperone ClpB | 0.78 | AO353_07335 | | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 101 |
| Pseudomonas sp. BP01 | 0.70 | JOY50_RS27140 | clpB | ATP-dependent chaperone ClpB | 0.80 | JOY50_RS18120 | | PrkA family serine protein kinase | low | > 84 |
| Pseudomonas sp. DMC3 | 0.70 | GFF4006 | | Chaperone protein ClpB | 0.78 | GFF41 | | hypothetical protein | low | > 89 |
| Pseudomonas putida KT2440 | 0.70 | PP_0625 | | Chaperone protein ClpB | 0.80 | PP_0397 | | protein kinase | 0.20 | 18 |
| Pseudomonas segetis P6 | 0.70 | MPMX49_03920 | | Chaperone protein ClpB | 0.79 | MPMX49_00875 | | hypothetical protein | low | > 75 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.67 | H281DRAFT_00817 | | ATP-dependent Clp protease ATP-binding subunit ClpB | 0.76 | H281DRAFT_05232 | | putative serine protein kinase, PrkA | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.67 | ABIE53_002033 | | ATP-dependent Clp protease ATP-binding subunit ClpB | 0.76 | ABIE53_002318 | | serine protein kinase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.67 | QEN71_RS22370 | | ATP-dependent chaperone ClpB | 0.75 | QEN71_RS07375 | | PrkA family serine protein kinase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.67 | BPHYT_RS08990 | | protein disaggregation chaperone | 0.76 | BPHYT_RS11190 | | PrkA family serine protein kinase | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.65 | RR42_RS12455 | | protein disaggregation chaperone | 0.76 | RR42_RS36485 | | serine/threonine protein kinase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.65 | ABZR87_RS11485 | | ATP-dependent chaperone ClpB | 0.77 | ABZR87_RS14220 | | PrkA family serine protein kinase | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.65 | Ac3H11_1474 | | ClpB protein | 0.76 | Ac3H11_1145 | | Serine protein kinase (prkA protein), P-loop containing | low | > 79 |
| Herbaspirillum seropedicae SmR1 | 0.65 | HSERO_RS10545 | | protein disaggregation chaperone | 0.75 | HSERO_RS21690 | | PrkA family serine protein kinase | low | > 78 |
| Variovorax sp. SCN45 | 0.63 | GFF2792 | | Chaperone protein ClpB (ATP-dependent unfoldase) | 0.77 | GFF2932 | | Uncharacterized protein YeaG | low | > 127 |
| Variovorax sp. OAS795 | 0.63 | ABID97_RS10930 | | ATP-dependent chaperone ClpB | 0.77 | ABID97_RS10270 | | PrkA family serine protein kinase | 0.30 | 73 |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS06205 | | ATP-dependent chaperone ClpB | 0.14 | ABCV34_RS05540 | | serine protein kinase | low | > 48 |
| Azospirillum sp. SherDot2 | 0.58 | MPMX19_02442 | | Chaperone protein ClpB | 0.69 | MPMX19_02157 | | hypothetical protein | low | > 112 |
| Rhizobium sp. OAE497 | 0.57 | ABIE40_RS17260 | | ATP-dependent chaperone ClpB | 0.70 | ABIE40_RS12550 | | PrkA family serine protein kinase | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.55 | SMc02433 | | ATP-dependent protease | 0.67 | SMc01267 | | hypothetical protein | low | > 103 |
| Phaeobacter inhibens DSM 17395 | 0.55 | PGA1_c32440 | | chaperone protein ClpB | 0.68 | PGA1_c02470 | | putative serine-protein kinase, PrkA type | low | > 62 |
| Magnetospirillum magneticum AMB-1 | 0.55 | AMB_RS07865 | | ATP-dependent chaperone ClpB | 0.69 | AMB_RS10885 | | PrkA family serine protein kinase | low | > 64 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.52 | CA264_14135 | | ATP-dependent chaperone ClpB | 0.67 | CA264_07100 | | PrkA family serine protein kinase | low | > 74 |
Not shown: 46 genomes with orthologs for CSW01_03705 only; 0 genomes with orthologs for CSW01_09380 only