| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 1.0 | CSW01_05930 | | tryptophan synthase subunit beta | 0.52 | 11 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_08505 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | low | > 88 |
| Escherichia fergusonii Becca | 0.62 | EFB2_03939 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | EFB2_02665 | | Tryptophan synthase beta chain | low | > 86 |
| Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS00590 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | low | > 55 |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_00801 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.83 | MPMX20_02513 | | Tryptophan synthase beta chain | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF129 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.83 | GFF2725 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 78 |
| Escherichia coli ECRC100 | 0.61 | OKFHMN_10525 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | low | > 79 |
| Escherichia coli ECRC101 | 0.61 | MCAODC_01040 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | low | > 87 |
| Erwinia amylovora T8 | 0.61 | OLJFJH_01045 | | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.84 | OLJFJH_13475 | | tryptophan synthase subunit beta | low | > 58 |
| Escherichia coli ECRC98 | 0.61 | JDDGAC_14120 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | low | > 87 |
| Escherichia coli ECRC99 | 0.61 | KEDOAH_17630 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | — | — |
| Enterobacter asburiae PDN3 | 0.61 | EX28DRAFT_3703 | | N-acetylmuramoyl-L-alanine amidase | 0.82 | EX28DRAFT_0933 | | tryptophan synthase, beta subunit | — | — |
| Escherichia coli ECRC102 | 0.61 | NIAGMN_08375 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECOR27 | 0.61 | NOLOHH_02870 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | low | > 75 |
| Escherichia coli BL21 | 0.61 | ECD_00109 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase | 0.82 | ECD_01235 | | tryptophan synthase, beta subunit | 0.55 | 36 |
| Escherichia coli BW25113 | 0.61 | b0110 | ampD | N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) | 0.82 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.61 | OHPLBJKB_03551 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.61 | MIT1002_03006 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.74 | MIT1002_01426 | | Tryptophan synthase beta chain | — | — |
| Escherichia coli ECRC62 | 0.61 | BNILDI_08740 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | low | > 75 |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS04850 | | N-acetylmuramoyl-L-alanine amidase | 0.83 | BWI76_RS11845 | | tryptophan synthase subunit beta | low | > 92 |
| Klebsiella pneumoniae MRSN742743 | 0.60 | GJGHJB_04171 | ampD | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.83 | GJGHJB_02945 | trpB | tryptophan synthase subunit beta | low | > 83 |
| Klebsiella pneumoniae MKP103 | 0.60 | KDGMDA_13085 | | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.83 | KDGMDA_19550 | | tryptophan synthase subunit beta | low | > 94 |
| Kangiella aquimarina DSM 16071 | 0.60 | B158DRAFT_2134 | | Negative regulator of beta-lactamase expression | 0.63 | B158DRAFT_2429 | | tryptophan synthase, beta subunit | low | > 40 |
| Rahnella sp. WP5 | 0.59 | EX31_RS03510 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.82 | EX31_RS09975 | | tryptophan synthase subunit beta | low | > 89 |
| Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS01880 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.50 | HSERO_RS16475 | | tryptophan synthase subunit alpha | low | > 78 |
| Pantoea sp. MT58 | 0.58 | IAI47_15840 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.84 | IAI47_09170 | | tryptophan synthase subunit beta | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.58 | PagCFBP13516_RS16150 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.84 | PagCFBP13516_RS09305 | trpB | tryptophan synthase subunit beta | low | > 80 |
| Serratia liquefaciens MT49 | 0.57 | IAI46_03535 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.84 | IAI46_14040 | | tryptophan synthase subunit beta | low | > 87 |
| Pseudomonas segetis P6 | 0.56 | ACVTMO_RS19325 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | ACVTMO_RS01835 | trpB | tryptophan synthase subunit beta | — | — |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS19020 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.85 | DZA65_RS10945 | | tryptophan synthase subunit beta | low | > 75 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS17875 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.85 | HGI48_RS10465 | | tryptophan synthase subunit beta | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS03260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.85 | HER17_RS10935 | | tryptophan synthase subunit beta | low | > 75 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS17945 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.85 | DDA3937_RS10465 | | tryptophan synthase subunit beta | low | > 74 |
| Pseudomonas sp. SVBP6 | 0.56 | COO64_RS03530 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.52 | COO64_RS02275 | trpB | tryptophan synthase subunit beta | — | — |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_0423 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.82 | Shewana3_1516 | | tryptophan synthase subunit beta (RefSeq) | low | > 73 |
| Pseudomonas aeruginosa PA14 | 0.55 | IKLFDK_01470 | | beta-lactamase expression regulator AmpD | 0.53 | IKLFDK_25375 | | tryptophan synthase subunit beta | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.55 | NPBIFN_04785 | ampD | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | NPBIFN_00037 | trpB | tryptophan synthase subunit beta | low | > 101 |
| Shewanella oneidensis MR-1 | 0.53 | SO0421 | ampD | AmpD protein (NCBI ptt file) | 0.82 | SO3023 | trpB | tryptophan synthase, beta subunit (NCBI ptt file) | low | > 76 |
| Pseudomonas lactucae CFBP13502 | 0.53 | GEMAOFIL_00991 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | GEMAOFIL_00242 | | Tryptophan synthase beta chain | low | > 96 |
| Pseudomonas simiae WCS417 | 0.53 | PS417_03935 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.54 | PS417_00185 | | tryptophan synthase subunit beta | low | > 88 |
| Marinobacter adhaerens HP15 | 0.53 | HP15_1307 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.55 | HP15_1827 | | tryptophan synthase, beta subunit | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_1151 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.54 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Pseudomonas sp. RS175 | 0.53 | PFR28_00100 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.54 | PFR28_04715 | | Tryptophan synthase beta chain | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.54 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_16530 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | 0.53 | OH686_12425 | | tryptophan synthase, beta subunit | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.54 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
| Pseudomonas sp. DMC3 | 0.53 | GFF4998 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | GFF676 | | Tryptophan synthase beta chain | low | > 89 |
| Shewanella loihica PV-4 | 0.53 | Shew_3434 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.82 | Shew_2255 | | tryptophan synthase subunit beta (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.53 | Sama_0372 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.81 | Sama_2133 | | tryptophan synthase subunit beta (RefSeq) | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_0725 | | Negative regulator of beta-lactamase expression | 0.53 | Psest_0063 | | tryptophan synthase, beta subunit | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.52 | PfGW456L13_5081 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.53 | PfGW456L13_566 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.52 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | 0.52 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.52 | AO356_07360 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.53 | AO356_10915 | | tryptophan synthase subunit beta | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_3344 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.53 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.52 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | 0.52 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
| Pseudomonas putida KT2440 | 0.51 | PP_0789 | | N-acetyl-anhydromuramyl-L-alanine-amidase | 0.54 | PP_0083 | | tryptophan synthase beta chain | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_05510 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.53 | AO353_10710 | | tryptophan synthase subunit beta | low | > 101 |
| Pseudomonas sp. BP01 | 0.51 | JOY50_RS19335 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.54 | JOY50_RS21310 | trpB | tryptophan synthase subunit beta | low | > 84 |
| Pseudomonas protegens RBAN4 | 0.51 | FABNJH_04435 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | FABNJH_00195 | trpB | tryptophan synthase subunit beta | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.51 | PFGADD_04726 | ampD | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | PFGADD_00037 | trpB | tryptophan synthase subunit beta | 0.31 | 49 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS09025 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.51 | ABCV34_RS08435 | | tryptophan synthase subunit beta | — | — |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_00043 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.52 | MPMX26_02617 | | Tryptophan synthase beta chain | low | > 36 |
| Acinetobacter baumannii LAC-4 | 0.49 | RR41_RS18675 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | RR41_RS03115 | | tryptophan synthase subunit beta | low | > 55 |
| Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS17065 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.54 | BPHYT_RS33875 | | tryptophan synthase subunit alpha | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS17865 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.55 | RR42_RS14360 | | tryptophan synthase subunit alpha | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_06273 | | AmpD protein | 0.53 | H281DRAFT_06067 | | tryptophan synthase, beta chain | low | > 103 |
| Dechlorosoma suillum PS | 0.47 | Dsui_0134 | | negative regulator of beta-lactamase expression | 0.53 | Dsui_3192 | | tryptophan synthase, beta subunit | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS27225 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.54 | QEN71_RS17645 | | tryptophan synthase subunit beta | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.47 | ABIE53_003579 | | AmpD protein | 0.53 | ABIE53_004809 | | tryptophan synthase beta chain | — | — |
| Methylophilus sp. DMC18 | 0.47 | GFF2302 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.54 | GFF656 | | Tryptophan synthase beta chain | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF594 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.53 | GFF3355 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS14030 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | RS_RS09965 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS11160 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | RPSI07_RS14730 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS06080 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS07545 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | UW163_RS11140 | | tryptophan synthase subunit beta | — | — |
| Variovorax sp. SCN45 | 0.45 | GFF4433 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | 0.53 | GFF3883 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS01745 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | ABZR87_RS14500 | | tryptophan synthase subunit beta | low | > 80 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS06410 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.53 | ABID97_RS08430 | | tryptophan synthase subunit beta | — | — |
| Acidovorax sp. GW101-3H11 | 0.37 | Ac3H11_4020 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.53 | Ac3H11_1534 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
Not shown: 0 genomes with orthologs for CSW01_12260 only; 45 genomes with orthologs for CSW01_05930 only