Conservation of cofitness between CSW01_09385 and CSW01_03705 in Vibrio cholerae E7946 ATCC 55056

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09385 hypothetical protein 1.0 CSW01_03705 chaperone protein ClpB 0.54 7
Klebsiella pneumoniae MKP103 0.76 KDGMDA_19155 UPF0229 protein KPK_3252 0.78 KDGMDA_02125 ATP-dependent chaperone ClpB low > 95
Serratia liquefaciens MT49 0.75 IAI46_14380 YeaH/YhbH family protein 0.77 IAI46_03995 ATP-dependent chaperone ClpB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_01948 hypothetical protein 0.78 OHPLBJKB_01114 Chaperone protein ClpB low > 74
Klebsiella michiganensis M5al 0.75 BWI76_RS11480 hypothetical protein 0.78 BWI76_RS21440 ATP-dependent chaperone ClpB low > 92
Escherichia coli ECRC62 0.75 BNILDI_16020 yeaH UPF0229 protein YeaH 0.78 BNILDI_11745 clpB ATP-dependent chaperone ClpB low > 75
Escherichia coli ECOR27 0.75 NOLOHH_17235 yeaH UPF0229 protein YeaH 0.78 NOLOHH_12940 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC101 0.75 MCAODC_18705 yeaH UPF0229 protein YeaH 0.78 MCAODC_11795 clpB ATP-dependent chaperone ClpB low > 87
Escherichia coli BL21 0.75 ECD_01753 UPF0229 family protein 0.78 ECD_02482 protein disaggregation chaperone — —
Escherichia coli ECRC100 0.75 OKFHMN_26705 yeaH UPF0229 protein YeaH 0.78 OKFHMN_21265 clpB ATP-dependent chaperone ClpB low > 79
Escherichia coli ECRC98 0.75 JDDGAC_01280 yeaH UPF0229 protein YeaH 0.78 JDDGAC_24930 clpB ATP-dependent chaperone ClpB low > 87
Escherichia coli ECRC102 0.75 NIAGMN_01360 yeaH UPF0229 protein YeaH 0.78 NIAGMN_19035 clpB ATP-dependent chaperone ClpB low > 80
Escherichia coli BW25113 0.75 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.78 b2592 clpB protein disaggregation chaperone (NCBI) low > 76
Escherichia coli ECRC99 0.75 KEDOAH_01405 yeaH UPF0229 protein YeaH 0.78 KEDOAH_06955 clpB ATP-dependent chaperone ClpB — —
Escherichia fergusonii Becca 0.75 EFB2_02210 hypothetical protein 0.78 EFB2_01298 Chaperone protein ClpB low > 86
Escherichia coli ECOR38 0.75 HEPCGN_05095 yeaH UPF0229 protein YeaH 0.78 HEPCGN_20390 clpB ATP-dependent chaperone ClpB low > 88
Escherichia coli Nissle 1917 0.75 ECOLIN_RS09945 YeaH/YhbH family protein 0.78 ECOLIN_RS14665 ATP-dependent chaperone ClpB — —
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1777 Uncharacterized conserved protein 0.78 EX28DRAFT_2693 ATP-dependent chaperone ClpB low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_01839 hypothetical protein 0.78 MPMX20_03461 Chaperone protein ClpB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF3472 UPF0229 protein YeaH 0.78 GFF4184 ClpB protein low > 78
Pectobacterium carotovorum WPP14 0.73 HER17_RS11155 YeaH/YhbH family protein 0.77 HER17_RS05410 ATP-dependent chaperone ClpB low > 75
Pantoea sp. MT58 0.73 IAI47_08920 YeaH/YhbH family protein 0.77 IAI47_04435 ATP-dependent chaperone ClpB low > 76
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS02755 YeaH/YhbH family protein 0.77 PagCFBP13505_RS16530 ATP-dependent chaperone ClpB low > 74
Rahnella sp. WP5 0.73 EX31_RS06255 YeaH/YhbH family protein 0.76 EX31_RS07560 ATP-dependent chaperone ClpB low > 89
Erwinia amylovora T8 0.72 OLJFJH_13195 UPF0229 protein ETA_15540 0.76 OLJFJH_09740 ATP-dependent chaperone ClpB low > 58
Dickeya dianthicola 67-19 0.72 HGI48_RS10250 YeaH/YhbH family protein 0.78 HGI48_RS16225 ATP-dependent chaperone ClpB low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS10240 YeaH/YhbH family protein 0.77 DDA3937_RS16100 ATP-dependent chaperone ClpB low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS10725 YeaH/YhbH family protein 0.78 DZA65_RS17320 ATP-dependent chaperone ClpB low > 75
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_22595 yeaH UPF0229 protein ETA_15540 0.76 IJEDHG_26855 clpB ATP-dependent chaperone ClpB low > 61
Erwinia tracheiphila SCR3 0.71 LU632_RS13015 YeaH/YhbH family protein 0.76 LU632_RS16935 clpB ATP-dependent chaperone ClpB low > 73
Alteromonas macleodii MIT1002 0.69 MIT1002_01232 hypothetical protein 0.78 MIT1002_02677 Heat shock protein F84.1 low > 70
Shewanella oneidensis MR-1 0.68 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.80 SO3577 clpB clpB protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.66 Shew_1832 hypothetical protein (RefSeq) 0.80 Shew_2948 ATPase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.66 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.80 Sama_2603 clpB protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_1637 hypothetical protein (RefSeq) 0.80 Shewana3_3169 ATPase (RefSeq) low > 73
Pseudomonas aeruginosa MRSN321 0.59 DY961_RS22960 YeaH/YhbH family protein 0.71 DY961_RS23740 clpB;go_function=ATP ATP-dependent chaperone ClpB low > 100
Pseudomonas aeruginosa PA14 0.59 IKLFDK_22475 UPF0229 protein PA14_07660 0.71 IKLFDK_00820 Chaperone protein ClpB low > 98
Pseudomonas aeruginosa PUPa3 0.59 DQ20_RS36385 YeaH/YhbH family protein 0.71 DQ20_RS56205 clpB;go_function=ATP ATP-dependent chaperone ClpB low > 101
Pseudomonas sp. BP01 0.58 JOY50_RS18115 YeaH/YhbH family protein 0.70 JOY50_RS27140 clpB ATP-dependent chaperone ClpB low > 84
Pseudomonas sp. SVBP6 0.58 COO64_RS22535 YeaH/YhbH family protein 0.72 COO64_RS11065 clpB ATP-dependent chaperone ClpB low > 93
Pseudomonas putida KT2440 0.57 PP_0396 conserved protein of unknown function 0.70 PP_0625 Chaperone protein ClpB low > 96
Pseudomonas segetis P6 0.57 ACVTMO_RS04330 YeaH/YhbH family protein 0.70 ACVTMO_RS19430 clpB ATP-dependent chaperone ClpB low > 75
Pseudomonas sp. S08-1 0.57 OH686_15015 UPF0229 protein YeaH 0.71 OH686_16420 ATP-dependent chaperone protein ClpB low > 80
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.71 Pf6N2E2_5129 ClpB protein low > 103
Pseudomonas orientalis W4I3 0.57 QF045_RS00235 YeaH/YhbH family protein 0.71 QF045_RS06815 ATP-dependent chaperone ClpB low > 93
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.71 AO356_15935 ATP-dependent chaperone ClpB low > 104
Pseudomonas fluorescens SBW25 0.57 PFLU_RS27490 YeaH/YhbH family protein 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS27490 YeaH/YhbH family protein 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_05287 hypothetical protein 0.71 GEMAOFIL_00971 Chaperone protein ClpB low > 96
Pseudomonas sp. RS175 0.57 PFR28_04069 hypothetical protein 0.71 PFR28_03746 Chaperone protein ClpB low > 88
Pseudomonas stutzeri RCH2 0.57 Psest_3673 Uncharacterized conserved protein 0.71 Psest_0711 ATP-dependent chaperone ClpB low > 67
Pseudomonas sp. DMC3 0.57 GFF42 hypothetical protein 0.70 GFF4006 Chaperone protein ClpB low > 89
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2522 FIG002076: hypothetical protein 0.71 Pf1N1B4_2824 ClpB protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4632 Protein of unknown function DUF444 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal low > 86
Pseudomonas simiae WCS417 0.56 PS417_25835 hypothetical protein 0.71 PS417_03830 protein disaggregation chaperone low > 88
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4632 Protein of unknown function DUF444 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal low > 86
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.70 AO353_14230 ATP-dependent chaperone ClpB low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1195 FIG002076: hypothetical protein 0.71 PfGW456L13_1495 ClpB protein low > 87
Marinobacter adhaerens HP15 0.55 HP15_2934 protein YeaH 0.74 HP15_529 protein disaggregation chaperone low > 73
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS21695 hypothetical protein 0.65 HSERO_RS10545 protein disaggregation chaperone low > 78
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1146 FIG002076: hypothetical protein 0.65 Ac3H11_1474 ClpB protein low > 79
Variovorax sp. SCN45 0.52 GFF2934 FIG002076: hypothetical protein 0.63 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_05233 hypothetical protein 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB low > 103
Paraburkholderia graminis OAS925 0.52 ABIE53_002317 uncharacterized sporulation protein YeaH/YhbH (DUF444 family) 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB low > 113
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS36480 hypothetical protein 0.65 RR42_RS12455 protein disaggregation chaperone low > 128
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS14215 YeaH/YhbH family protein 0.65 ABZR87_RS11485 ATP-dependent chaperone ClpB low > 80
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS11185 hypothetical protein 0.67 BPHYT_RS08990 protein disaggregation chaperone low > 109
Variovorax sp. OAS795 0.51 ABID97_RS10265 YeaH/YhbH family protein 0.63 ABID97_RS10930 ATP-dependent chaperone ClpB low > 91
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS07380 YeaH/YhbH family protein 0.67 QEN71_RS22370 ATP-dependent chaperone ClpB low > 153
Magnetospirillum magneticum AMB-1 0.46 AMB_RS10890 hypothetical protein 0.55 AMB_RS07865 ATP-dependent chaperone ClpB low > 64
Azospirillum sp. SherDot2 0.45 MPMX19_02156 hypothetical protein 0.58 MPMX19_02442 Chaperone protein ClpB low > 112
Phaeobacter inhibens DSM 17395 0.44 PGA1_c02480 Uncharacterized conserved protein 0.55 PGA1_c32440 chaperone protein ClpB low > 62
Azospirillum brasilense Sp245 0.43 AZOBR_RS12650 hypothetical protein 0.58 AZOBR_RS18950 ATPase AAA low > 97
Sinorhizobium meliloti 1021 0.41 SMc01266 hypothetical protein 0.55 SMc02433 ATP-dependent protease low > 103
Rhizobium sp. OAE497 0.39 ABIE40_RS12545 YeaH/YhbH family protein 0.57 ABIE40_RS17260 ATP-dependent chaperone ClpB low > 107
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_07095 hypothetical protein 0.52 CA264_14135 ATP-dependent chaperone ClpB low > 74

Not shown: 0 genomes with orthologs for CSW01_09385 only; 46 genomes with orthologs for CSW01_03705 only