Conservation of cofitness between CSW01_00270 and CSW01_03705 in Vibrio cholerae E7946 ATCC 55056

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00270 threonylcarbamoyl-AMP synthase 1.0 CSW01_03705 chaperone protein ClpB 0.55 3
Enterobacter sp. TBS_079 0.61 MPMX20_04190 Threonylcarbamoyl-AMP synthase 0.78 MPMX20_03461 Chaperone protein ClpB — —
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0045 Putative translation factor (SUA5) 0.78 EX28DRAFT_2693 ATP-dependent chaperone ClpB — —
Klebsiella michiganensis M5al 0.58 BWI76_RS25650 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 BWI76_RS21440 ATP-dependent chaperone ClpB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF2396 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.78 GFF4184 ClpB protein — —
Klebsiella pneumoniae MKP103 0.58 KDGMDA_06520 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 KDGMDA_02125 ATP-dependent chaperone ClpB — —
Dickeya dianthicola 67-19 0.58 HGI48_RS19195 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 HGI48_RS16225 ATP-dependent chaperone ClpB — —
Dickeya dadantii 3937 0.58 DDA3937_RS19105 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.77 DDA3937_RS16100 ATP-dependent chaperone ClpB — —
Erwinia amylovora T8 0.58 OLJFJH_03690 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.76 OLJFJH_09740 ATP-dependent chaperone ClpB — —
Escherichia coli ECOR38 0.58 HEPCGN_16380 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 HEPCGN_20390 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC62 0.57 BNILDI_02170 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 BNILDI_11745 clpB ATP-dependent chaperone ClpB — —
Dickeya dianthicola ME23 0.57 DZA65_RS20320 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 DZA65_RS17320 ATP-dependent chaperone ClpB — —
Escherichia coli BW25113 0.57 b3282 yrdC predicted ribosome maturation factor (NCBI) 0.78 b2592 clpB protein disaggregation chaperone (NCBI) — —
Escherichia coli ECRC99 0.57 KEDOAH_10590 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 KEDOAH_06955 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC100 0.57 OKFHMN_17560 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 OKFHMN_21265 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECOR27 0.57 NOLOHH_09350 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 NOLOHH_12940 clpB ATP-dependent chaperone ClpB — —
Escherichia coli BL21 0.57 ECD_03133 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase 0.78 ECD_02482 protein disaggregation chaperone — —
Escherichia fergusonii Becca 0.57 EFB2_00541 Threonylcarbamoyl-AMP synthase 0.78 EFB2_01298 Chaperone protein ClpB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00421 Threonylcarbamoyl-AMP synthase 0.78 OHPLBJKB_01114 Chaperone protein ClpB — —
Escherichia coli ECRC102 0.57 NIAGMN_15320 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 NIAGMN_19035 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC98 0.57 JDDGAC_21180 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 JDDGAC_24930 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC101 0.57 MCAODC_08080 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 MCAODC_11795 clpB ATP-dependent chaperone ClpB — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS18845 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.78 ECOLIN_RS14665 ATP-dependent chaperone ClpB — —
Rahnella sp. WP5 0.56 EX31_RS15955 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.76 EX31_RS07560 ATP-dependent chaperone ClpB — —
Erwinia tracheiphila SCR3 0.55 LU632_RS22450 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.76 LU632_RS16935 clpB ATP-dependent chaperone ClpB — —
Erwinia tracheiphila HP pepo 2.2 0.55 IJEDHG_12500 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.76 IJEDHG_26855 clpB ATP-dependent chaperone ClpB — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS02245 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.77 HER17_RS05410 ATP-dependent chaperone ClpB — —
Serratia liquefaciens MT49 0.54 IAI46_23245 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.77 IAI46_03995 ATP-dependent chaperone ClpB — —
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS22555 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.77 PagCFBP13505_RS16530 ATP-dependent chaperone ClpB — —
Pantoea sp. MT58 0.52 IAI47_02310 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.77 IAI47_04435 ATP-dependent chaperone ClpB — —
Alteromonas macleodii MIT1002 0.50 MIT1002_00025 t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN 0.78 MIT1002_02677 Heat shock protein F84.1 — —
Shewanella sp. ANA-3 0.48 Shewana3_0040 translation factor SUA5 (RefSeq) 0.80 Shewana3_3169 ATPase (RefSeq) — —
Shewanella oneidensis MR-1 0.48 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) 0.80 SO3577 clpB clpB protein (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.48 Sama_0049 SUA5/YciO/YrdC-like protein (RefSeq) 0.80 Sama_2603 clpB protein (RefSeq) low > 62
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.4753.1 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.70 Xcc-8004.1382.1 ClpB protein — —
Lysobacter sp. OAE881 0.47 ABIE51_RS02215 Sua5/YciO/YrdC/YwlC family protein 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB — —
Shewanella loihica PV-4 0.46 Shew_3730 Sua5/YciO/YrdC/YwlC family protein (RefSeq) 0.80 Shew_2948 ATPase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.43 Psest_0026 Putative translation factor (SUA5) 0.71 Psest_0711 ATP-dependent chaperone ClpB — —
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS13860 Sua5/YciO/YrdC/YwlC family protein 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB — —
Pseudomonas putida KT2440 0.42 PP_0070 Threonylcarbamoyl-AMP synthase 0.70 PP_0625 Chaperone protein ClpB — —
Pseudomonas sp. S08-1 0.42 OH686_12500 Threonylcarbamoyl-AMP synthase 0.71 OH686_16420 ATP-dependent chaperone protein ClpB — —
Pseudomonas sp. BP01 0.42 JOY50_RS08230 L-threonylcarbamoyladenylate synthase 0.70 JOY50_RS27140 clpB ATP-dependent chaperone ClpB — —
Rhodanobacter sp000427505 FW510-R12 0.41 LRK53_RS02935 Sua5/YciO/YrdC/YwlC family protein 0.69 LRK53_RS05055 ATP-dependent chaperone ClpB — —
Pseudomonas aeruginosa PA14 0.41 IKLFDK_25450 Threonylcarbamoyl-AMP synthase 0.71 IKLFDK_00820 Chaperone protein ClpB — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_0022 translation factor SUA5 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal — —
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS10155 Sua5/YciO/YrdC/YwlC family protein 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB — —
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_0022 translation factor SUA5 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal — —
Pseudomonas aeruginosa MRSN321 0.41 DY961_RS26310 Sua5/YciO/YrdC/YwlC family protein 0.71 DY961_RS23740 clpB;go_function=ATP ATP-dependent chaperone ClpB — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_13760 Threonylcarbamoyl-AMP synthase 0.69 OKGIIK_01800 clpB ATP-dependent chaperone ClpB — —
Pseudomonas sp. SVBP6 0.41 COO64_RS02235 L-threonylcarbamoyladenylate synthase 0.72 COO64_RS11065 clpB ATP-dependent chaperone ClpB — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS09795 Sua5/YciO/YrdC/YwlC family protein 0.69 LRK55_RS04735 ATP-dependent chaperone ClpB — —
Pseudomonas aeruginosa PUPa3 0.41 DQ20_RS58715 Sua5/YciO/YrdC/YwlC family protein 0.71 DQ20_RS56205 clpB;go_function=ATP ATP-dependent chaperone ClpB — —
Pseudomonas fluorescens SBW25 0.39 PFLU_RS00105 tRNA threonylcarbamoyladenosine biosynthesis protein RimN 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB — —
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS00105 tRNA threonylcarbamoyladenosine biosynthesis protein RimN 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB — —
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_10655 tRNA threonylcarbamoyladenosine biosynthesis protein RimN 0.70 AO353_14230 ATP-dependent chaperone ClpB — —
Pseudomonas sp. DMC3 0.39 GFF595 Threonylcarbamoyl-AMP synthase 0.70 GFF4006 Chaperone protein ClpB — —
Pseudomonas sp. RS175 0.39 PFR28_04658 Threonylcarbamoyl-AMP synthase 0.71 PFR28_03746 Chaperone protein ClpB — —
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_11300 tRNA threonylcarbamoyladenosine biosynthesis protein RimN 0.71 AO356_15935 ATP-dependent chaperone ClpB — —
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_4126 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.71 Pf6N2E2_5129 ClpB protein — —
Pseudomonas orientalis W4I3 0.39 QF045_RS03045 L-threonylcarbamoyladenylate synthase 0.71 QF045_RS06815 ATP-dependent chaperone ClpB — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_647 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.71 PfGW456L13_1495 ClpB protein — —
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_00228 Threonylcarbamoyl-AMP synthase 0.71 GEMAOFIL_00971 Chaperone protein ClpB — —
Pseudomonas simiae WCS417 0.38 PS417_00110 tRNA threonylcarbamoyladenosine biosynthesis protein RimN 0.71 PS417_03830 protein disaggregation chaperone — —
Pseudomonas segetis P6 0.38 ACVTMO_RS01370 L-threonylcarbamoyladenylate synthase 0.70 ACVTMO_RS19430 clpB ATP-dependent chaperone ClpB — —
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_1909 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.71 Pf1N1B4_2824 ClpB protein — —
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0403 Putative translation factor (SUA5) 0.74 B158DRAFT_2535 ATP-dependent chaperone ClpB low > 40
Marinobacter adhaerens HP15 0.35 HP15_3747 Sua5/YciO/YrdC/YwlC family protein 0.74 HP15_529 protein disaggregation chaperone low > 73
Acinetobacter baumannii LAC-4 0.33 RR41_RS18090 threonylcarbamoyl-AMP synthase 0.63 RR41_RS10060 ATP-dependent chaperone ClpB — —
Acinetobacter radioresistens SK82 0.31 MPMX26_00113 Threonylcarbamoyl-AMP synthase 0.64 MPMX26_01096 Chaperone protein ClpB — —
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS07710 L-threonylcarbamoyladenylate synthase 0.52 HMPREF1078_RS00500 ATP-dependent chaperone ClpB — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_11045 threonylcarbamoyl-AMP synthase 0.52 CA264_14135 ATP-dependent chaperone ClpB — —
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS02975 threonylcarbamoyl-AMP synthase 0.51 CA265_RS12775 ATP-dependent chaperone ClpB — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS17455 L-threonylcarbamoyladenylate synthase 0.53 ABZR88_RS10630 ATP-dependent chaperone ClpB — —
Bacteroides ovatus ATCC 8483 0.24 BACOVA_01200 Sua5/YciO/YrdC/YwlC family protein 0.53 BACOVA_05393 ATP-dependent chaperone protein ClpB — —
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS00255 threonylcarbamoyl-AMP synthase 0.51 ABI39_RS18885 ATP-dependent chaperone ClpB — —
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS07740 threonylcarbamoyl-AMP synthase 0.51 HMPREF1058_RS04980 ATP-dependent chaperone ClpB — —
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS06520 threonylcarbamoyl-AMP synthase 0.53 HMPREF1181_RS11960 ATP-dependent chaperone ClpB — —
Bacteroides thetaiotaomicron VPI-5482 0.23 BT3943 conserved hypothetical protein, putative translation factor (NCBI ptt file) 0.52 BT4597 endopeptidase Clp ATP-binding chain B (NCBI ptt file) — —
Synechococcus elongatus PCC 7942 0.18 Synpcc7942_1864 hypothetical protein 0.55 Synpcc7942_1089 clpB ATPase — —

Not shown: 0 genomes with orthologs for CSW01_00270 only; 43 genomes with orthologs for CSW01_03705 only