Conservation of cofitness between CSW01_09245 and CSW01_02890 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09245 Holliday junction branch migration protein RuvA 1.0 CSW01_02890 aspartate kinase 0.75 12
Shewanella oneidensis MR-1 0.63 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) 0.36 SO3427 aspartokinase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.62 Shewana3_1956 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.34 Shewana3_1129 aspartate kinase (RefSeq) — —
Shewanella amazonensis SB2B 0.60 Sama_1840 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.33 Sama_1049 aspartate kinase (RefSeq) — —
Pseudomonas putida KT2440 0.57 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.37 PP_4473 aspartokinase — —
Pseudomonas stutzeri RCH2 0.56 Psest_1496 Holliday junction DNA helicase, RuvA subunit 0.36 Psest_2988 aspartate kinase, monofunctional class low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.36 Psyr_3555 aspartate kinase low > 86
Pseudomonas sp. S08-1 0.55 OH686_19130 Holliday junction DNA helicase RuvA 0.35 OH686_21330 aspartate kinase, monofunctional class — —
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.36 Psyr_3555 aspartate kinase — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_18020 ATP-dependent DNA helicase RuvA 0.36 AO356_18775 aspartate kinase low > 104
Pseudomonas sp. RS175 0.55 PFR28_03413 Holliday junction ATP-dependent DNA helicase RuvA 0.36 PFR28_03273 Aspartate kinase low > 88
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5536 Holliday junction DNA helicase RuvA 0.36 Pf6N2E2_5676 Aspartokinase (EC 2.7.2.4) low > 103
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_03585 ATP-dependent DNA helicase RuvA 0.35 AO353_02975 aspartate kinase low > 101
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_638 Holliday junction DNA helicase RuvA 0.35 Pf1N1B4_3451 Aspartokinase (EC 2.7.2.4) — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_1852 Holliday junction DNA helicase RuvA 0.35 PfGW456L13_1981 Aspartokinase (EC 2.7.2.4) low > 87
Marinobacter adhaerens HP15 0.52 HP15_2041 Holliday junction ATP-dependent DNA helicase RuvA 0.36 HP15_1320 aspartate kinase: aspartate kinase, monofunctional class — —
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.35 PFLU_RS23265 aspartate kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.35 PFLU_RS23265 aspartate kinase low > 109
Pseudomonas simiae WCS417 0.52 PS417_22450 ATP-dependent DNA helicase RuvA 0.35 PS417_21655 aspartate kinase low > 88
Dechlorosoma suillum PS 0.43 Dsui_0485 Holliday junction DNA helicase, RuvA subunit 0.35 Dsui_2134 aspartate kinase, monofunctional class — —
Acinetobacter radioresistens SK82 0.42 MPMX26_02185 Holliday junction ATP-dependent DNA helicase RuvA 0.34 MPMX26_01085 Aspartate kinase — —
Variovorax sp. SCN45 0.41 GFF2073 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) 0.31 GFF546 Aspartokinase (EC 2.7.2.4) — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS16615 holliday junction ATP-dependent DNA helicase RuvA 0.29 BPHYT_RS12410 aspartate kinase — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS07980 Holliday junction branch migration protein RuvA 0.34 ABCV34_RS00405 aspartate kinase — —
Variovorax sp. OAS795 0.39 ABID97_RS24920 Holliday junction branch migration protein RuvA 0.31 ABID97_RS17825 aspartate kinase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1666 Holliday junction DNA helicase RuvA 0.29 GFF5136 Aspartokinase (EC 2.7.2.4) — —
Paraburkholderia graminis OAS925 0.38 ABIE53_003494 Holliday junction DNA helicase RuvA 0.29 ABIE53_002703 aspartate kinase low > 113
Ralstonia solanacearum GMI1000 0.38 RS_RS02490 Holliday junction branch migration protein RuvA 0.30 RS_RS05835 aspartate kinase — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS11670 Holliday junction branch migration protein RuvA 0.30 RALBFv3_RS15020 aspartate kinase — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS07625 Holliday junction branch migration protein RuvA 0.30 ABZR87_RS10665 aspartate kinase — —
Ralstonia solanacearum UW163 0.38 UW163_RS01915 Holliday junction branch migration protein RuvA 0.30 UW163_RS12490 aspartate kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04254 Holliday junction DNA helicase subunit RuvA 0.30 H281DRAFT_00550 aspartate kinase — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS26795 Holliday junction branch migration protein RuvA 0.30 QEN71_RS06150 aspartate kinase — —
Ralstonia solanacearum PSI07 0.37 RPSI07_RS21550 Holliday junction branch migration protein RuvA 0.31 RPSI07_RS18355 aspartate kinase — —
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS02705 Holliday junction DNA helicase RuvA 0.30 RR42_RS06370 aspartate kinase — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS02090 Holliday junction DNA helicase RuvA 0.29 HSERO_RS10695 aspartate kinase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS15860 Holliday junction branch migration protein RuvA 0.26 A4249_RS14490 aspartate kinase — —
Rhodopseudomonas palustris CGA009 0.25 TX73_005655 Holliday junction branch migration protein RuvA 0.27 TX73_003125 aspartate kinase — —
Rhodospirillum rubrum S1H 0.24 Rru_A1088 DNA recombination protein RuvA (NCBI) 0.29 Rru_A0743 Aspartate kinase (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_0820 Holliday junction DNA helicase subunit RuvA 0.27 Ga0059261_2519 aspartate kinase (EC 2.7.2.4) — —
Magnetospirillum magneticum AMB-1 0.23 AMB_RS16255 Holliday junction branch migration protein RuvA 0.27 AMB_RS08140 aspartate kinase — —
Bosea sp. OAE506 0.23 ABIE41_RS09475 Holliday junction branch migration protein RuvA 0.27 ABIE41_RS20090 aspartate kinase — —
Mycobacterium tuberculosis H37Rv 0.23 Rv2593c Probable holliday junction DNA helicase RuvA 0.29 Rv3709c Aspartokinase Ask (aspartate kinase) [contains: aspartokinase alpha subunit (Ask-alpha); and aspartokinase beta subunit (Ask-beta)] — —
Rhizobium sp. OAE497 0.22 ABIE40_RS15745 Holliday junction branch migration protein RuvA 0.26 ABIE40_RS17305 aspartate kinase — —
Sinorhizobium meliloti 1021 0.22 SMc03966 Holliday junction DNA helicase RuvA 0.25 SMc02438 aspartate kinase — —
Phaeobacter inhibens DSM 17395 0.22 PGA1_c05860 holliday junction ATP-dependent DNA helicase RuvA 0.25 PGA1_c23510 aspartokinase LysC — —
Agrobacterium fabrum C58 0.22 Atu3723 Holliday junction DNA helicase RuvA 0.25 Atu4172 aspartate kinase — —
Dinoroseobacter shibae DFL-12 0.21 Dshi_1104 Holliday junction DNA helicase RuvA (RefSeq) 0.25 Dshi_2061 aspartate kinase (RefSeq) — —
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_3204 Holliday junction DNA helicase RuvA (RefSeq) 0.29 DvMF_0276 aspartate kinase (RefSeq) — —
Caulobacter crescentus NA1000 0.21 CCNA_03345 Holliday junction DNA helicase RuvA 0.28 CCNA_00886 aspartokinase — —
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_03345 Holliday junction DNA helicase RuvA 0.28 CCNA_00886 aspartokinase — —

Not shown: 50 genomes with orthologs for CSW01_09245 only; 1 genomes with orthologs for CSW01_02890 only