Conservation of cofitness between CSW01_09385 and CSW01_01850 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09385 hypothetical protein 1.0 CSW01_01850 protease modulator HflC 0.43 16
Klebsiella pneumoniae MKP103 0.76 KDGMDA_19155 UPF0229 protein KPK_3252 0.50 KDGMDA_11050 protease modulator HflC low > 95
Serratia liquefaciens MT49 0.75 IAI46_14380 YeaH/YhbH family protein 0.51 IAI46_01640 protease modulator HflC low > 86
Klebsiella michiganensis M5al 0.75 BWI76_RS11480 hypothetical protein 0.50 BWI76_RS02550 protease modulator HflC low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_01948 hypothetical protein 0.50 OHPLBJKB_03867 Modulator of FtsH protease HflC low > 74
Escherichia coli ECRC101 0.75 MCAODC_18705 yeaH UPF0229 protein YeaH 0.50 MCAODC_02755 hflC protease modulator HflC low > 88
Escherichia coli BL21 0.75 ECD_01753 UPF0229 family protein 0.50 ECD_04042 HflB protease modulator specific for phage lambda cII repressor — —
Escherichia coli ECRC99 0.75 KEDOAH_01405 yeaH UPF0229 protein YeaH 0.50 KEDOAH_15915 hflC protease modulator HflC — —
Escherichia coli BW25113 0.75 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.50 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) low > 76
Escherichia coli ECRC62 0.75 BNILDI_16020 yeaH UPF0229 protein YeaH 0.50 BNILDI_06985 hflC protease modulator HflC low > 75
Escherichia coli ECOR27 0.75 NOLOHH_17235 yeaH UPF0229 protein YeaH 0.50 NOLOHH_04505 hflC protease modulator HflC — —
Escherichia coli ECRC102 0.75 NIAGMN_01360 yeaH UPF0229 protein YeaH 0.50 NIAGMN_10090 hflC protease modulator HflC low > 80
Escherichia coli ECRC100 0.75 OKFHMN_26705 yeaH UPF0229 protein YeaH 0.50 OKFHMN_12240 hflC protease modulator HflC low > 79
Escherichia coli ECRC98 0.75 JDDGAC_01280 yeaH UPF0229 protein YeaH 0.50 JDDGAC_15880 hflC protease modulator HflC low > 87
Escherichia coli Nissle 1917 0.75 ECOLIN_RS09945 YeaH/YhbH family protein 0.50 ECOLIN_RS24245 protease modulator HflC — —
Escherichia fergusonii Becca 0.75 EFB2_02210 hypothetical protein 0.50 EFB2_04360 Modulator of FtsH protease HflC low > 86
Escherichia coli ECOR38 0.75 HEPCGN_05095 yeaH UPF0229 protein YeaH 0.50 HEPCGN_10470 hflC protease modulator HflC low > 88
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1777 Uncharacterized conserved protein 0.48 EX28DRAFT_3372 HflC protein low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_01839 hypothetical protein 0.51 MPMX20_00456 Modulator of FtsH protease HflC low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF3472 UPF0229 protein YeaH 0.50 GFF828 HflC protein low > 78
Pectobacterium carotovorum WPP14 0.73 HER17_RS11155 YeaH/YhbH family protein 0.50 HER17_RS02600 protease modulator HflC low > 75
Pantoea sp. MT58 0.73 IAI47_08920 YeaH/YhbH family protein 0.50 IAI47_02605 protease modulator HflC low > 76
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS02755 YeaH/YhbH family protein 0.51 PagCFBP13505_RS11200 protease modulator HflC low > 74
Rahnella sp. WP5 0.73 EX31_RS06255 YeaH/YhbH family protein 0.49 EX31_RS08805 protease modulator HflC low > 89
Erwinia amylovora T8 0.72 OLJFJH_13195 UPF0229 protein ETA_15540 0.49 OLJFJH_02485 protease modulator HflC low > 58
Dickeya dianthicola 67-19 0.72 HGI48_RS10250 YeaH/YhbH family protein 0.49 HGI48_RS18530 protease modulator HflC low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS10240 YeaH/YhbH family protein 0.48 DDA3937_RS18595 protease modulator HflC — —
Dickeya dianthicola ME23 0.71 DZA65_RS10725 YeaH/YhbH family protein 0.49 DZA65_RS19665 protease modulator HflC low > 75
Erwinia tracheiphila SCR3 0.71 LU632_RS13015 YeaH/YhbH family protein 0.50 LU632_RS02070 hflC protease modulator HflC low > 74
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_22595 yeaH UPF0229 protein ETA_15540 0.51 IJEDHG_06850 hflC protease modulator HflC low > 61
Alteromonas macleodii MIT1002 0.69 MIT1002_01232 hypothetical protein 0.50 MIT1002_03785 Modulator of FtsH protease HflC low > 70
Shewanella oneidensis MR-1 0.68 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.50 SO0606 hflC hflC protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.66 Shew_1832 hypothetical protein (RefSeq) 0.49 Shew_0569 HflC protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.66 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.49 Sama_3022 hflC protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_1637 hypothetical protein (RefSeq) 0.50 Shewana3_0600 HflC protein (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.59 IKLFDK_22475 UPF0229 protein PA14_07660 0.32 IKLFDK_28835 protease modulator HflC — —
Pseudomonas sp. SVBP6 0.58 COO64_RS22535 YeaH/YhbH family protein 0.33 COO64_RS17915 hflC protease modulator HflC low > 93
Pseudomonas sp. BP01 0.58 JOY50_RS18115 YeaH/YhbH family protein 0.31 JOY50_RS17245 hflC protease modulator HflC low > 84
Pseudomonas putida KT2440 0.57 PP_0396 conserved protein of unknown function 0.31 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex low > 96
Pseudomonas sp. S08-1 0.57 OH686_15015 UPF0229 protein YeaH 0.31 OH686_09455 HflC protein low > 80
Pseudomonas segetis P6 0.57 MPMX49_00874 hypothetical protein 0.30 MPMX49_04150 Modulator of FtsH protease HflC 0.66 38
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.33 Pf6N2E2_3611 HflC protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.33 AO356_08640 membrane protease HflC low > 104
Pseudomonas fluorescens SBW25 0.57 PFLU_RS27490 YeaH/YhbH family protein 0.32 PFLU_RS02585 protease modulator HflC low > 109
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_05287 hypothetical protein 0.32 GEMAOFIL_00739 Modulator of FtsH protease HflC low > 93
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS27490 YeaH/YhbH family protein 0.32 PFLU_RS02585 protease modulator HflC low > 109
Pseudomonas sp. RS175 0.57 PFR28_04069 hypothetical protein 0.30 PFR28_05124 Modulator of FtsH protease HflC low > 88
Pseudomonas stutzeri RCH2 0.57 Psest_3673 Uncharacterized conserved protein 0.31 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs — —
Pseudomonas sp. DMC3 0.57 GFF42 hypothetical protein 0.32 GFF3223 Modulator of FtsH protease HflC low > 89
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4632 Protein of unknown function DUF444 0.33 Psyr_0575 protease FtsH subunit HflC low > 86
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2522 FIG002076: hypothetical protein 0.33 Pf1N1B4_1409 HflC protein — —
Pseudomonas simiae WCS417 0.56 PS417_25835 hypothetical protein 0.29 PS417_02505 membane protease HflC — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4632 Protein of unknown function DUF444 0.33 Psyr_0575 protease FtsH subunit HflC low > 86
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.33 AO353_13160 membrane protease HflC low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1195 FIG002076: hypothetical protein 0.33 PfGW456L13_151 HflC protein low > 87
Marinobacter adhaerens HP15 0.55 HP15_2934 protein YeaH 0.36 HP15_2496 HflC low > 73
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS21695 hypothetical protein 0.30 HSERO_RS14760 membrane protein 0.48 10
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1146 FIG002076: hypothetical protein 0.26 Ac3H11_1802 HflC protein low > 79
Variovorax sp. SCN45 0.52 GFF2934 FIG002076: hypothetical protein 0.25 GFF1003 HflC protein 0.70 82
Paraburkholderia graminis OAS925 0.52 ABIE53_002317 uncharacterized sporulation protein YeaH/YhbH (DUF444 family) 0.21 ABIE53_002734 membrane protease subunit HflC low > 113
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_05233 hypothetical protein 0.20 H281DRAFT_00524 protease FtsH subunit HflC — —
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS36480 hypothetical protein 0.29 RR42_RS13100 membrane protein — —
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS14215 YeaH/YhbH family protein 0.29 ABZR87_RS10955 protease modulator HflC low > 80
Variovorax sp. OAS795 0.51 ABID97_RS10265 YeaH/YhbH family protein 0.25 ABID97_RS14265 protease modulator HflC 0.33 88
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS11185 hypothetical protein 0.19 BPHYT_RS12540 membrane protein — —
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS07380 YeaH/YhbH family protein 0.19 QEN71_RS06015 protease modulator HflC low > 153
Magnetospirillum magneticum AMB-1 0.46 AMB_RS10890 hypothetical protein 0.28 AMB_RS17655 protease modulator HflC — —
Azospirillum sp. SherDot2 0.45 MPMX19_02156 hypothetical protein 0.26 MPMX19_01250 Modulator of FtsH protease HflC — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c02480 Uncharacterized conserved protein 0.28 PGA1_c23700 protein HflC low > 62
Azospirillum brasilense Sp245 0.43 AZOBR_RS12650 hypothetical protein 0.24 AZOBR_RS06525 membrane protein low > 97
Sinorhizobium meliloti 1021 0.41 SMc01266 hypothetical protein 0.21 SMc01440 hydrolase serine protease transmembrane protein low > 103
Rhizobium sp. OAE497 0.39 ABIE40_RS12545 YeaH/YhbH family protein 0.19 ABIE40_RS11530 protease modulator HflC low > 107

Not shown: 1 genomes with orthologs for CSW01_09385 only; 27 genomes with orthologs for CSW01_01850 only