Conservation of cofitness between CSW01_00205 and CSW01_01480 in Vibrio cholerae E7946 ATCC 55056

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00205 hemolysin III family protein 1.0 CSW01_01480 phosphogluconate dehydratase 0.51 13
Enterobacter asburiae PDN3 0.76 EX28DRAFT_2950 channel protein, hemolysin III family 0.54 EX28DRAFT_0705 6-phosphogluconate dehydratase (EC 4.2.1.12) low > 76
Klebsiella michiganensis M5al 0.76 BWI76_RS23840 hemolysin III family protein 0.53 BWI76_RS18100 phosphogluconate dehydratase low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03758 hypothetical protein 0.54 MPMX20_02756 Phosphogluconate dehydratase low > 85
Klebsiella pneumoniae MKP103 0.76 KDGMDA_04325 hemolysin III family protein 0.54 KDGMDA_25365 phosphogluconate dehydratase low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog 0.54 GFF1630 Phosphogluconate dehydratase (EC 4.2.1.12) low > 78
Escherichia coli ECRC98 0.73 JDDGAC_23185 yqfA hemolysin III family protein 0.54 JDDGAC_00915 edd phosphogluconate dehydratase low > 87
Escherichia coli ECRC102 0.73 NIAGMN_17310 yqfA hemolysin III family protein 0.54 NIAGMN_01720 edd phosphogluconate dehydratase low > 80
Escherichia coli BL21 0.73 ECD_02731 hemolysin III family HylIII inner membrane protein 0.54 ECD_01822 6-phosphogluconate dehydratase low > 61
Escherichia coli Nissle 1917 0.73 ECOLIN_RS16150 hemolysin III family protein 0.54 ECOLIN_RS10310 phosphogluconate dehydratase — —
Escherichia fergusonii Becca 0.73 EFB2_01002 hypothetical protein 0.54 EFB2_02092 Phosphogluconate dehydratase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00816 hypothetical protein 0.54 OHPLBJKB_01878 Phosphogluconate dehydratase low > 74
Escherichia coli ECRC62 0.73 BNILDI_10000 yqfA hemolysin III family protein 0.54 BNILDI_15645 edd phosphogluconate dehydratase low > 75
Escherichia coli ECRC99 0.73 KEDOAH_08595 yqfA hemolysin III family protein 0.54 KEDOAH_01765 edd phosphogluconate dehydratase — —
Escherichia coli ECOR27 0.73 NOLOHH_11465 yqfA hemolysin III family protein 0.54 NOLOHH_16850 edd phosphogluconate dehydratase low > 76
Escherichia coli ECRC100 0.73 OKFHMN_19545 yqfA hemolysin III family protein 0.54 OKFHMN_26340 edd phosphogluconate dehydratase low > 79
Escherichia coli ECOR38 0.73 HEPCGN_18835 yqfA hemolysin III family protein 0.54 HEPCGN_04745 edd phosphogluconate dehydratase low > 88
Escherichia coli BW25113 0.73 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) 0.54 b1851 edd phosphogluconate dehydratase (NCBI) low > 76
Escherichia coli ECRC101 0.73 MCAODC_10065 yqfA hemolysin III family protein 0.54 MCAODC_19065 edd phosphogluconate dehydratase low > 87
Serratia liquefaciens MT49 0.72 IAI46_20775 hemolysin III family protein 0.54 IAI46_23175 phosphogluconate dehydratase low > 87
Rahnella sp. WP5 0.69 EX31_RS21610 hemolysin III family protein 0.54 EX31_RS16630 phosphogluconate dehydratase low > 89
Alteromonas macleodii MIT1002 0.52 MIT1002_00886 hemolysin 0.52 MIT1002_02405 Phosphogluconate dehydratase low > 70
Shewanella loihica PV-4 0.48 Shew_2098 hemolysin III family channel protein (RefSeq) 0.54 Shew_2046 phosphogluconate dehydratase (RefSeq) — —
Shewanella oneidensis MR-1 0.48 SO2447 channel protein, hemolysin III family subfamily (NCBI ptt file) 0.54 SO2487 edd 6-phosphogluconate dehydratase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.46 Shewana3_1934 hemolysin III family channel protein (RefSeq) 0.54 Shewana3_2149 phosphogluconate dehydratase (RefSeq) low > 73
Rhodanobacter sp000427505 FW510-R12 0.45 LRK53_RS17430 hemolysin III family protein 0.51 LRK53_RS00665 phosphogluconate dehydratase — —
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_00475 yqfA putative membrane channel-forming protein YqfA, hemolysin III family 0.50 OKGIIK_14370 edd phosphogluconate dehydratase — —
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS18160 hemolysin III family protein 0.50 ABZR86_RS14690 phosphogluconate dehydratase low > 74
Shewanella amazonensis SB2B 0.44 Sama_1862 hemolysin III family channel protein (RefSeq) 0.53 Sama_1810 phosphogluconate dehydratase (RefSeq) — —
Marinobacter adhaerens HP15 0.44 HP15_2974 channel protein, hemolysin III family 0.50 HP15_2174 6-phosphogluconate dehydratase low > 73
Rhodanobacter denitrificans MT42 0.44 LRK55_RS05890 hemolysin III family protein 0.50 LRK55_RS07610 phosphogluconate dehydratase — —
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS06145 hemolysin III family protein 0.50 LRK54_RS07880 phosphogluconate dehydratase — —
Acinetobacter baumannii LAC-4 0.42 RR41_RS03190 hemolysin III family protein 0.50 RR41_RS16530 phosphogluconate dehydratase low > 55
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.1589.1 COG1272: Predicted membrane protein hemolysin III homolog 0.49 Xcc-8004.2447.1 Phosphogluconate dehydratase (EC 4.2.1.12) low > 74
Lysobacter sp. OAE881 0.39 ABIE51_RS16230 hemolysin III family protein 0.45 ABIE51_RS01610 phosphogluconate dehydratase low > 62
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS16440 hemolysin D 0.49 BPHYT_RS16735 phosphogluconate dehydratase low > 109
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4296 COG1272: Predicted membrane protein hemolysin III homolog 0.48 Ac3H11_2082 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS02270 hemolysin III family protein 0.48 QEN71_RS26920 phosphogluconate dehydratase low > 153
Paraburkholderia graminis OAS925 0.38 ABIE53_003461 hemolysin III 0.49 ABIE53_003517 phosphogluconate dehydratase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04221 hemolysin III 0.49 H281DRAFT_04278 6-phosphogluconate dehydratase low > 103
Pseudomonas putida KT2440 0.37 PP_4986 Channel protein, hemolysin III family 0.51 PP_1010 phosphogluconate dehydratase — —
Variovorax sp. OAS795 0.36 ABID97_RS07605 hemolysin III family protein 0.49 ABID97_RS21300 phosphogluconate dehydratase low > 91
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0452 HylII 0.51 Psyr_1109 6-phosphogluconate dehydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0452 HylII 0.51 Psyr_1109 6-phosphogluconate dehydratase low > 86
Pseudomonas sp. SVBP6 0.35 COO64_RS13640 hemolysin III family protein 0.51 COO64_RS04535 edd phosphogluconate dehydratase — —
Pseudomonas sp. BP01 0.35 JOY50_RS09760 hemolysin III family protein 0.51 JOY50_RS11390 edd phosphogluconate dehydratase 0.41 32
Pseudomonas lactucae CFBP13502 0.35 GEMAOFIL_05445 hypothetical protein 0.52 GEMAOFIL_04692 Phosphogluconate dehydratase low > 96
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4629 COG1272: Predicted membrane protein hemolysin III homolog 0.51 Pf6N2E2_2898 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_13560 hemolysin III 0.51 AO356_05220 phosphogluconate dehydratase — —
Pseudomonas sp. RS175 0.35 PFR28_04213 hypothetical protein 0.51 PFR28_00561 Phosphogluconate dehydratase low > 88
Pseudomonas sp. S08-1 0.34 OH686_06045 Predicted membrane protein, hemolysin III-related 0.51 OH686_02490 phosphogluconate dehydratase low > 80
Sinorhizobium meliloti 1021 0.34 SMc00455 hypothetical protein 0.49 SMc03068 phosphogluconate dehydratase 0.20 82
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS28225 hemolysin III family protein 0.52 PFLU_RS24330 phosphogluconate dehydratase low > 109
Pseudomonas sp. DMC3 0.34 GFF181 hypothetical protein 0.51 GFF5152 Phosphogluconate dehydratase low > 89
Pseudomonas orientalis W4I3 0.34 QF045_RS00960 hemolysin III family protein 0.52 QF045_RS24860 phosphogluconate dehydratase 0.36 40
Pseudomonas fluorescens SBW25 0.34 PFLU_RS28225 hemolysin III family protein 0.52 PFLU_RS24330 phosphogluconate dehydratase low > 109
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2371 COG1272: Predicted membrane protein hemolysin III homolog 0.51 Pf1N1B4_601 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Pseudomonas simiae WCS417 0.34 PS417_26570 hemolysin III 0.52 PS417_22690 phosphogluconate dehydratase low > 88
Agrobacterium fabrum C58 0.34 Atu0906 Hemolysin III 0.51 Atu0598 phosphogluconate dehydratase low > 89
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1038 COG1272: Predicted membrane protein hemolysin III homolog 0.51 PfGW456L13_1889 Phosphogluconate dehydratase (EC 4.2.1.12) low > 87
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_08075 hemolysin III 0.52 AO353_03420 phosphogluconate dehydratase low > 101
Pseudomonas aeruginosa PA14 0.33 IKLFDK_29400 hemolysin III 0.51 IKLFDK_16230 phosphogluconate dehydratase — —
Pseudomonas aeruginosa PUPa3 0.33 DQ20_RS52110 hemolysin III family protein 0.51 DQ20_RS40090 edd;go_function=phosphogluconate phosphogluconate dehydratase low > 101
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS09940 hemolysin III family protein 0.51 DY961_RS00950 edd;go_function=phosphogluconate phosphogluconate dehydratase low > 100
Rhizobium sp. OAE497 0.32 ABIE40_RS04960 hemolysin III family protein 0.51 ABIE40_RS03190 phosphogluconate dehydratase low > 107
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS02015 hemolysin III family protein 0.50 ABZR87_RS22920 phosphogluconate dehydratase low > 80
Pseudomonas stutzeri RCH2 0.32 Psest_3779 channel protein, hemolysin III family 0.52 Psest_0849 6-phosphogluconate dehydratase low > 67
Variovorax sp. SCN45 0.32 GFF5671 FIG01964566: Predicted membrane protein, hemolysin III homolog 0.47 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) low > 127
Azospirillum sp. SherDot2 0.29 MPMX19_02364 hypothetical protein 0.50 MPMX19_05118 Phosphogluconate dehydratase — —
Dinoroseobacter shibae DFL-12 0.24 Dshi_2910 Hly-III family protein (RefSeq) 0.47 Dshi_1769 6-phosphogluconate dehydratase (RefSeq) low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS14635 hemolysin III family protein 0.50 A4249_RS10735 phosphogluconate dehydratase low > 48

Not shown: 23 genomes with orthologs for CSW01_00205 only; 15 genomes with orthologs for CSW01_01480 only