Conservation of cofitness between CSW01_01275 and CSW01_01285 in Vibrio cholerae E7946 ATCC 55056

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01275 phosphomannomutase/phosphoglucomutase 1.0 CSW01_01285 perosamine synthetase 1.00 3
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS01110 phosphomannomutase CpsG 0.25 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Serratia liquefaciens MT49 0.71 IAI46_08075 phosphomannomutase CpsG 0.25 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 86
Dickeya dadantii 3937 0.69 DDA3937_RS18660 phosphomannomutase/phosphoglucomutase 0.26 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_01667 Phosphomannomutase/phosphoglucomutase 0.22 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS19725 phosphomannomutase/phosphoglucomutase 0.25 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS18590 phosphomannomutase CpsG 0.26 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 71
Enterobacter asburiae PDN3 0.68 EX28DRAFT_0507 Phosphomannomutase 0.24 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 76
Escherichia coli ECOR27 0.68 NOLOHH_15700 cpsG colanic acid biosynthesis phosphomannomutase CpsG 0.23 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Escherichia coli BW25113 0.68 b2048 cpsG phosphomannomutase (NCBI) 0.22 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) low > 76
Pectobacterium carotovorum WPP14 0.68 HER17_RS14515 phosphomannomutase CpsG 0.24 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli BL21 0.68 ECD_01954 phosphomannomutase 0.24 ECD_01942 VioA, involved in dTDP-N-acetylviosamine synthesis
Enterobacter sp. TBS_079 0.68 MPMX20_03030 Phosphomannomutase/phosphoglucomutase 0.24 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 85
Escherichia coli Nissle 1917 0.68 ECOLIN_RS12070 colanic acid biosynthesis phosphomannomutase CpsG 0.22 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 55
Escherichia fergusonii Becca 0.68 EFB2_01806 Phosphomannomutase/phosphoglucomutase 0.23 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 86
Escherichia coli ECRC102 0.68 NIAGMN_22315 cpsG colanic acid biosynthesis phosphomannomutase CpsG 0.54 NIAGMN_22375 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC98 0.68 JDDGAC_28480 cpsG colanic acid biosynthesis phosphomannomutase CpsG 0.54 JDDGAC_28540 rfbE GDP-perosamine synthase RfbE/PerA low > 87
Escherichia coli ECRC101 0.68 MCAODC_20570 cpsG colanic acid biosynthesis phosphomannomutase CpsG 0.54 MCAODC_20510 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC99 0.68 KEDOAH_03780 cpsG colanic acid biosynthesis phosphomannomutase CpsG 0.54 KEDOAH_03720 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC100 0.68 OKFHMN_24370 cpsG colanic acid biosynthesis phosphomannomutase CpsG 0.54 OKFHMN_24430 rfbE GDP-perosamine synthase RfbE/PerA low > 79
Escherichia coli ECOR38 0.68 HEPCGN_03070 cpsG colanic acid biosynthesis phosphomannomutase CpsG 0.24 HEPCGN_03130 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA
Escherichia coli ECRC62 0.68 BNILDI_14615 cpsG colanic acid biosynthesis phosphomannomutase CpsG 0.22 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Rahnella sp. WP5 0.67 EX31_RS02875 phosphomannomutase CpsG 0.24 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF3880 Phosphomannomutase (EC 5.4.2.8) 0.25 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.41 66
Acinetobacter baumannii LAC-4 0.65 RR41_RS18520 phosphomannomutase/phosphoglucomutase 0.24 RR41_RS18630 LegC family aminotransferase
Alteromonas macleodii MIT1002 0.59 MIT1002_01940 Phosphomannomutase/phosphoglucomutase 0.22 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 70
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_01220 Phosphomannomutase 0.23 OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 52
Pseudomonas sp. BP01 0.54 JOY50_RS15915 phosphomannomutase 0.22 JOY50_RS13135 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 84
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.4480.1 Phosphomannomutase (EC 5.4.2.8) 0.22 Xcc-8004.2801.1 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 74
Marinobacter adhaerens HP15 0.54 HP15_209 phosphomannomutase 0.23 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family
Pseudomonas sp. SVBP6 0.52 COO64_RS06650 phosphomannomutase 0.22 COO64_RS21480 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA low > 93
Variovorax sp. OAS795 0.24 ABID97_RS21385 phosphomannomutase/phosphoglucomutase 0.24 ABID97_RS02145 DegT/DnrJ/EryC1/StrS family aminotransferase low > 91
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS02355 phosphoglucomutase 0.27 HSERO_RS21000 aminotransferase DegT low > 78
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS25415 phosphomannomutase/phosphoglucomutase 0.22 QEN71_RS29145 DegT/DnrJ/EryC1/StrS family aminotransferase
Variovorax sp. SCN45 0.24 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) 0.22 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 127
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_0219 phosphomannomutase 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_0219 phosphomannomutase 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF5772 Phosphomannomutase (EC 5.4.2.8) 0.20 GFF1844 Aminotransferase low > 90
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS04470 phosphoglucomutase 0.21 BPHYT_RS08930 aminotransferase DegT
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_00078 phosphomannomutase 0.22 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase
Paraburkholderia graminis OAS925 0.23 ABIE53_001189 phosphomannomutase/phosphoglucomutase 0.22 ABIE53_000145 dTDP-4-amino-4,6-dideoxygalactose transaminase
Pseudomonas simiae WCS417 0.23 PS417_27785 phosphoglucomutase 0.21 PS417_27245 aminotransferase DegT low > 88
Dechlorosoma suillum PS 0.23 Dsui_3344 phosphomannomutase 0.23 Dsui_1769 putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Methylophilus sp. DMC18 0.23 GFF69 Phosphomannomutase/phosphoglucomutase 0.22 GFF528 dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase low > 43
Pseudomonas sp. RS175 0.23 PFR28_04415 Phosphomannomutase/phosphoglucomutase 0.23 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_09235 phosphoglucomutase 0.25 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase low > 101
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_00025 Phosphomannomutase/phosphoglucomutase 0.21 GEMAOFIL_05587 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 93
Desulfovibrio vulgaris Hildenborough JW710 0.23 DVU0685 rfbB phosphomannomutase (TIGR) 0.24 DVU3010 lpsC aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR)
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_2122 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) 0.22 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase low > 87
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS08745 phosphomannomutase/phosphoglucomutase 0.36 ABZR87_RS22110 DegT/DnrJ/EryC1/StrS family aminotransferase
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_794 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) 0.37 PfGW456L13_4375 perosamine synthetase low > 87
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_12530 phosphoglucomutase 0.22 AO356_03965 aminotransferase low > 104
Methanococcus maripaludis S2 0.22 MMP_RS07075 phosphomannomutase/phosphoglucomutase 0.33 MMP_RS01880 DegT/DnrJ/EryC1/StrS family aminotransferase 0.88 6
Pseudomonas fluorescens FW300-N2E2 0.22 Pf6N2E2_4374 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) 0.23 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase low > 103
Pseudomonas sp. DMC3 0.22 GFF406 Phosphomannomutase/phosphoglucomutase 0.21 GFF2433 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 89
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS15690 phosphoglucomutase 0.25 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase
Rhodospirillum rubrum S1H 0.22 Rru_B0045 Phosphomannomutase (NCBI) 0.21 Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) low > 58
Ralstonia solanacearum PSI07 0.22 RPSI07_RS20565 phosphomannomutase/phosphoglucomutase 0.22 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_2456 Phosphomannomutase 0.20 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_2673 Phosphomannomutase (RefSeq) 0.21 DvMF_1891 Glutamine--scyllo-inositol transaminase (RefSeq) low > 51
Azospirillum brasilense Sp245 0.21 AZOBR_RS33725 phosphomannomutase 0.21 AZOBR_RS33605 erythromycin biosynthesis sensory transduction protein eryC1 low > 97
Magnetospirillum magneticum AMB-1 0.20 AMB_RS02965 phosphomannomutase/phosphoglucomutase 0.28 AMB_RS00275 DegT/DnrJ/EryC1/StrS family aminotransferase
Castellaniella sp019104865 MT123 0.19 ABCV34_RS09280 phosphomannomutase/phosphoglucomutase 0.22 ABCV34_RS12945 DegT/DnrJ/EryC1/StrS family aminotransferase
Caulobacter crescentus NA1000 0.15 CCNA_02347 phosphomannomutase/phosphoglucomutase 0.41 CCNA_01064 perosamine synthetase 0.60 37
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_02347 phosphomannomutase/phosphoglucomutase 0.41 CCNA_01064 perosamine synthetase 0.72 26
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1178 phosphoglucosamine mutase 0.24 Echvi_0062 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Cellulophaga baltica 18 0.13 M666_RS15505 phosphoglucosamine mutase 0.28 M666_RS12340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Pontibacter actiniarum KMM 6156, DSM 19842 0.13 CA264_15145 phosphoglucosamine mutase 0.30 CA264_12460 aminotransferase DegT
Mucilaginibacter yixingensis YX-36 DSM 26809 0.13 ABZR88_RS14070 phosphoglucosamine mutase 0.28 ABZR88_RS12735 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Pedobacter sp. GW460-11-11-14-LB5 0.13 CA265_RS13185 phosphoglucosamine mutase 0.35 CA265_RS01760 aminotransferase DegT
Bacteroides thetaiotaomicron VPI-5482 0.12 BT3950 phosphoglucomutase/phosphomannomutase (NCBI ptt file) 0.22 BT3376 nucleotide sugar transaminase (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.12 BACOVA_01208 phosphoglucosamine mutase 0.20 BACOVA_03734 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Parabacteroides merdae CL09T00C40 0.12 HMPREF1078_RS00820 phosphoglucosamine mutase 0.26 HMPREF1078_RS01585 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Bacteroides stercoris CC31F 0.12 HMPREF1181_RS06485 phosphoglucosamine mutase 0.18 HMPREF1181_RS14960 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Phocaeicola vulgatus CL09T03C04 0.11 HMPREF1058_RS07690 phosphoglucosamine mutase 0.20 HMPREF1058_RS03380 DegT/DnrJ/EryC1/StrS family aminotransferase
Phocaeicola dorei CL03T12C01 0.11 ABI39_RS00205 phosphoglucosamine mutase 0.27 ABI39_RS13755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 72

Not shown: 16 genomes with orthologs for CSW01_01275 only; 21 genomes with orthologs for CSW01_01285 only