Conservation of cofitness between CSW01_07570 and CSW01_01000 in Vibrio cholerae E7946 ATCC 55056

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07570 nucleotide-binding protein 1.0 CSW01_01000 glutathione-disulfide reductase 0.59 4
Shewanella sp. ANA-3 0.64 Shewana3_0782 putative nucleotide-binding protein (RefSeq) 0.75 Shewana3_4054 glutathione reductase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO3815 conserved hypothetical protein (NCBI ptt file) 0.75 SO4702 gor glutathione reductase (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.64 BWI76_RS06410 YajQ family cyclic di-GMP-binding protein 0.75 BWI76_RS26685 glutathione-disulfide reductase low > 92
Shewanella amazonensis SB2B 0.63 Sama_2557 putative nucleotide-binding protein (RefSeq) 0.75 Sama_3543 glutathione reductase (RefSeq) low > 62
Escherichia fergusonii Becca 0.62 EFB2_03631 hypothetical protein 0.73 EFB2_00315 Glutathione reductase low > 86
Escherichia coli BL21 0.62 ECD_00374 phage Phi6 host factor, ATP/GTP binding protein 0.72 ECD_03349 glutathione oxidoreductase low > 61
Dickeya dianthicola 67-19 0.62 HGI48_RS05620 YajQ family cyclic di-GMP-binding protein 0.71 HGI48_RS00065 glutathione-disulfide reductase — —
Escherichia coli ECRC102 0.62 NIAGMN_06445 yajQ nucleotide binding protein YajQ 0.73 NIAGMN_14170 gorA glutathione-disulfide reductase low > 80
Dickeya dadantii 3937 0.62 DDA3937_RS05560 YajQ family cyclic di-GMP-binding protein 0.72 DDA3937_RS21245 glutathione-disulfide reductase low > 74
Escherichia coli ECRC101 0.62 MCAODC_27615 yajQ nucleotide binding protein YajQ 0.73 MCAODC_06920 gorA glutathione-disulfide reductase low > 87
Escherichia coli ECRC98 0.62 JDDGAC_12045 yajQ nucleotide binding protein YajQ 0.73 JDDGAC_20035 gorA glutathione-disulfide reductase low > 87
Escherichia coli ECRC100 0.62 OKFHMN_08390 yajQ nucleotide binding protein YajQ 0.73 OKFHMN_16405 gorA glutathione-disulfide reductase — —
Escherichia coli ECRC62 0.62 BNILDI_22755 yajQ nucleotide binding protein YajQ 0.72 BNILDI_03220 gorA glutathione-disulfide reductase 0.57 31
Enterobacter asburiae PDN3 0.62 EX28DRAFT_2545 Uncharacterized protein conserved in bacteria 0.72 EX28DRAFT_4061 NADPH-glutathione reductase (EC 1.8.1.7) low > 76
Escherichia coli Nissle 1917 0.62 ECOLIN_RS02565 nucleotide binding protein YajQ 0.73 ECOLIN_RS19995 glutathione-disulfide reductase — —
Escherichia coli BW25113 0.62 b0426 yajQ orf, hypothetical protein (VIMSS) 0.72 b3500 gor glutathione reductase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03250 hypothetical protein 0.72 OHPLBJKB_00203 Glutathione reductase low > 74
Escherichia coli ECOR38 0.62 HEPCGN_07020 yajQ nucleotide binding protein YajQ 0.73 HEPCGN_15315 gorA glutathione-disulfide reductase low > 88
Escherichia coli ECOR27 0.62 NOLOHH_01340 yajQ nucleotide binding protein YajQ 0.72 NOLOHH_08340 gorA glutathione-disulfide reductase low > 76
Escherichia coli ECRC99 0.62 KEDOAH_19575 yajQ nucleotide binding protein YajQ 0.73 KEDOAH_11740 gorA glutathione-disulfide reductase — —
Serratia liquefaciens MT49 0.62 IAI46_04955 YajQ family cyclic di-GMP-binding protein 0.75 IAI46_24240 glutathione-disulfide reductase low > 87
Enterobacter sp. TBS_079 0.62 MPMX20_01017 hypothetical protein 0.73 MPMX20_04399 Glutathione reductase low > 85
Pectobacterium carotovorum WPP14 0.62 HER17_RS15905 YajQ family cyclic di-GMP-binding protein 0.73 HER17_RS21240 glutathione-disulfide reductase low > 75
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_0029 Uncharacterized protein conserved in bacteria 0.60 B158DRAFT_0460 NADPH-glutathione reductase (EC 1.8.1.7) low > 40
Dickeya dianthicola ME23 0.62 DZA65_RS05945 YajQ family cyclic di-GMP-binding protein 0.72 DZA65_RS00055 glutathione-disulfide reductase low > 75
Klebsiella pneumoniae MKP103 0.61 KDGMDA_14505 YajQ family cyclic di-GMP-binding protein 0.75 KDGMDA_07440 glutathione-disulfide reductase low > 95
Rahnella sp. WP5 0.61 EX31_RS22185 YajQ family cyclic di-GMP-binding protein 0.73 EX31_RS05175 glutathione-disulfide reductase low > 89
Shewanella loihica PV-4 0.61 Shew_2893 nucleotide-binding protein (RefSeq) 0.77 Shew_3660 glutathione reductase (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF4337 FIG001943: hypothetical protein YajQ 0.74 GFF513 Glutathione reductase (EC 1.8.1.7) low > 78
Erwinia tracheiphila HP pepo 2.2 0.60 IJEDHG_16340 YajQ family cyclic di-GMP-binding protein 0.74 IJEDHG_12565 gorA glutathione-disulfide reductase — —
Pantoea sp. MT58 0.60 IAI47_14710 YajQ family cyclic di-GMP-binding protein 0.74 IAI47_01325 glutathione-disulfide reductase low > 76
Alteromonas macleodii MIT1002 0.60 MIT1002_04129 putative nucleotide-binding protein 0.66 MIT1002_03638 Glutathione reductase low > 70
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS10485 YajQ family cyclic di-GMP-binding protein 0.74 PagCFBP13505_RS17825 glutathione-disulfide reductase — —
Erwinia tracheiphila SCR3 0.60 LU632_RS18450 YajQ family cyclic di-GMP-binding protein 0.74 LU632_RS19495 gorA glutathione-disulfide reductase low > 73
Erwinia amylovora T8 0.60 OLJFJH_18035 YajQ family cyclic di-GMP-binding protein 0.73 OLJFJH_04565 Glutathione oxidoreductase 0.23 36
Marinobacter adhaerens HP15 0.58 HP15_2364 nucleotide-binding protein 0.34 HP15_1612 protein containing FAD-dependent pyridine nucleotide-disulfide oxidoreductase / Pyridine nucleotide-disulfide oxidoreductase, dimerization low > 73
Pseudomonas aeruginosa PA14 0.55 IKLFDK_02120 YajQ family cyclic di-GMP-binding protein 0.38 IKLFDK_09905 glutathione-disulfide reductase low > 98
Pseudomonas aeruginosa MRSN321 0.55 DY961_RS24510 YajQ family cyclic di-GMP-binding protein 0.38 DY961_RS16315 gorA;go_function=glutathione-disulfide glutathione-disulfide reductase low > 100
Pseudomonas aeruginosa PUPa3 0.55 DQ20_RS56960 YajQ family cyclic di-GMP-binding protein 0.38 DQ20_RS38635 gorA;go_function=glutathione-disulfide glutathione-disulfide reductase low > 101
Ralstonia solanacearum PSI07 0.54 RPSI07_RS12140 YajQ family cyclic di-GMP-binding protein 0.21 RPSI07_RS23885 NAD(P)/FAD-dependent oxidoreductase — —
Pseudomonas sp. S08-1 0.53 OH686_08210 UPF0234 protein Yitk 0.37 OH686_01610 glutathione-disulfide reductase low > 80
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS00820 YajQ family cyclic di-GMP-binding protein 0.21 ABZR87_RS05295 NAD(P)/FAD-dependent oxidoreductase low > 80
Pseudomonas putida KT2440 0.52 PP_1352 UPF0234 protein PP_1352 0.39 PP_3819 glutathione reductase (NADPH) low > 96
Pseudomonas simiae WCS417 0.52 PS417_22510 nucleotide-binding protein 0.38 PS417_14060 glutathione reductase — —
Pseudomonas lactucae CFBP13502 0.52 GEMAOFIL_04654 hypothetical protein 0.38 GEMAOFIL_02927 Glutathione reductase low > 96
Pseudomonas sp. BP01 0.52 JOY50_RS15035 YajQ family cyclic di-GMP-binding protein 0.39 JOY50_RS04120 gorA glutathione-disulfide reductase low > 84
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein 0.38 PFLU_RS14555 glutathione-disulfide reductase low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein 0.38 PFLU_RS14555 glutathione-disulfide reductase low > 109
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS00410 YajQ family cyclic di-GMP-binding protein 0.41 ABZR86_RS08925 glutathione-disulfide reductase low > 74
Pseudomonas sp. RS175 0.52 PFR28_03425 hypothetical protein 0.37 PFR28_02483 Glutathione reductase low > 88
Pseudomonas orientalis W4I3 0.52 QF045_RS24675 YajQ family cyclic di-GMP-binding protein 0.38 QF045_RS15900 glutathione-disulfide reductase low > 93
Pseudomonas stutzeri RCH2 0.52 Psest_1142 Uncharacterized protein conserved in bacteria 0.37 Psest_2230 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes low > 67
Lysobacter sp. OAE881 0.52 ABIE51_RS18465 YajQ family cyclic di-GMP-binding protein 0.37 ABIE51_RS06410 glutathione-disulfide reductase low > 62
Pseudomonas sp. SVBP6 0.51 COO64_RS11975 YajQ family cyclic di-GMP-binding protein 0.38 COO64_RS22975 gorA glutathione-disulfide reductase low > 93
Pseudomonas segetis P6 0.51 MPMX49_03784 hypothetical protein 0.40 MPMX49_02509 Glutathione amide reductase low > 75
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_650 FIG001943: hypothetical protein YajQ 0.38 Pf1N1B4_5014 Glutathione reductase (EC 1.8.1.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_03640 nucleotide-binding protein 0.39 AO353_24480 glutathione reductase low > 101
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1840 FIG001943: hypothetical protein YajQ 0.38 PfGW456L13_2924 Glutathione reductase (EC 1.8.1.7) — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_5522 FIG001943: hypothetical protein YajQ 0.38 Pf6N2E2_446 Glutathione reductase (EC 1.8.1.7) low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_17960 nucleotide-binding protein 0.38 AO356_22800 glutathione reductase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_4087 Protein of unknown function DUF520 0.37 Psyr_2979 NADPH-glutathione reductase — —
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS17155 nucleotide-binding protein 0.25 RR42_RS20585 pyridine nucleotide-disulfide oxidoreductase — —
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_4087 Protein of unknown function DUF520 0.37 Psyr_2979 NADPH-glutathione reductase low > 86
Rhodanobacter sp000427505 FW510-R12 0.50 LRK53_RS13920 YajQ family cyclic di-GMP-binding protein 0.20 LRK53_RS14180 NAD(P)/FAD-dependent oxidoreductase low > 59
Pseudomonas sp. DMC3 0.50 GFF5198 hypothetical protein 0.37 GFF2944 Glutathione amide reductase low > 89
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS14675 YajQ family cyclic di-GMP-binding protein 0.19 LRK54_RS09620 NAD(P)/FAD-dependent oxidoreductase low > 59
Rhodanobacter denitrificans MT42 0.49 LRK55_RS14390 YajQ family cyclic di-GMP-binding protein 0.20 LRK55_RS17305 NAD(P)/FAD-dependent oxidoreductase low > 63
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_03500 yajQ YajQ family cyclic di-GMP-binding protein 0.19 OKGIIK_06155 lpd NAD(P)/FAD-dependent oxidoreductase low > 53
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.4605.1 FIG001943: hypothetical protein YajQ 0.39 Xcc-8004.1917.1 Glutathione reductase (EC 1.8.1.7) low > 74
Variovorax sp. OAS795 0.48 ABID97_RS21685 YajQ family cyclic di-GMP-binding protein 0.36 ABID97_RS00865 glutathione-disulfide reductase — —
Variovorax sp. SCN45 0.48 GFF3099 UPF0234 protein Yitk 0.37 GFF3591 Glutathione reductase (EC 1.8.1.7) — —
Magnetospirillum magneticum AMB-1 0.48 AMB_RS18375 nucleotide-binding protein 0.37 AMB_RS08430 glutathione-disulfide reductase low > 64
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS07165 nucleotide-binding protein 0.35 HSERO_RS16580 glutathione reductase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF292 FIG001943: hypothetical protein YajQ 0.34 GFF372 Glutathione reductase (EC 1.8.1.7) — —
Azospirillum sp. SherDot2 0.44 MPMX19_04413 hypothetical protein 0.36 MPMX19_04368 Glutathione amide reductase low > 112
Azospirillum brasilense Sp245 0.43 AZOBR_RS21810 nucleotide-binding protein 0.36 AZOBR_RS09745 glutathione reductase 0.33 18
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_0865 nucleotide-binding protein 0.35 Synpcc7942_0842 gor glutathione reductase low > 38

Not shown: 19 genomes with orthologs for CSW01_07570 only; 15 genomes with orthologs for CSW01_01000 only