Conservation of cofitness between CSW01_03705 and CSW01_00270 in Vibrio cholerae E7946 ATCC 55056

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03705 chaperone protein ClpB 1.0 CSW01_00270 threonylcarbamoyl-AMP synthase 0.55 5
Shewanella amazonensis SB2B 0.80 Sama_2603 clpB protein (RefSeq) 0.48 Sama_0049 SUA5/YciO/YrdC-like protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.80 SO3577 clpB clpB protein (NCBI ptt file) 0.48 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.80 Shewana3_3169 ATPase (RefSeq) 0.48 Shewana3_0040 translation factor SUA5 (RefSeq) — —
Shewanella loihica PV-4 0.80 Shew_2948 ATPase (RefSeq) 0.46 Shew_3730 Sua5/YciO/YrdC/YwlC family protein (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF4184 ClpB protein 0.58 GFF2396 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA — —
Alteromonas macleodii MIT1002 0.78 MIT1002_02677 Heat shock protein F84.1 0.50 MIT1002_00025 t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN — —
Enterobacter asburiae PDN3 0.78 EX28DRAFT_2693 ATP-dependent chaperone ClpB 0.60 EX28DRAFT_0045 Putative translation factor (SUA5) — —
Enterobacter sp. TBS_079 0.78 MPMX20_03461 Chaperone protein ClpB 0.61 MPMX20_04190 Threonylcarbamoyl-AMP synthase — —
Dickeya dianthicola ME23 0.78 DZA65_RS17320 ATP-dependent chaperone ClpB 0.57 DZA65_RS20320 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli ECOR38 0.78 HEPCGN_20390 clpB ATP-dependent chaperone ClpB 0.58 HEPCGN_16380 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli ECRC101 0.78 MCAODC_11795 clpB ATP-dependent chaperone ClpB 0.57 MCAODC_08080 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia fergusonii Becca 0.78 EFB2_01298 Chaperone protein ClpB 0.57 EFB2_00541 Threonylcarbamoyl-AMP synthase — —
Escherichia coli ECRC62 0.78 BNILDI_11745 clpB ATP-dependent chaperone ClpB 0.57 BNILDI_02170 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli ECRC102 0.78 NIAGMN_19035 clpB ATP-dependent chaperone ClpB 0.57 NIAGMN_15320 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli ECRC100 0.78 OKFHMN_21265 clpB ATP-dependent chaperone ClpB 0.57 OKFHMN_17560 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Klebsiella michiganensis M5al 0.78 BWI76_RS21440 ATP-dependent chaperone ClpB 0.58 BWI76_RS25650 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_01114 Chaperone protein ClpB 0.57 OHPLBJKB_00421 Threonylcarbamoyl-AMP synthase — —
Klebsiella pneumoniae MKP103 0.78 KDGMDA_02125 ATP-dependent chaperone ClpB 0.58 KDGMDA_06520 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli BW25113 0.78 b2592 clpB protein disaggregation chaperone (NCBI) 0.57 b3282 yrdC predicted ribosome maturation factor (NCBI) — —
Escherichia coli BL21 0.78 ECD_02482 protein disaggregation chaperone 0.57 ECD_03133 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase — —
Escherichia coli ECRC98 0.78 JDDGAC_24930 clpB ATP-dependent chaperone ClpB 0.57 JDDGAC_21180 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli ECOR27 0.78 NOLOHH_12940 clpB ATP-dependent chaperone ClpB 0.57 NOLOHH_09350 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli ECRC99 0.78 KEDOAH_06955 clpB ATP-dependent chaperone ClpB 0.57 KEDOAH_10590 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Escherichia coli Nissle 1917 0.78 ECOLIN_RS14665 ATP-dependent chaperone ClpB 0.57 ECOLIN_RS18845 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Dickeya dianthicola 67-19 0.78 HGI48_RS16225 ATP-dependent chaperone ClpB 0.58 HGI48_RS19195 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Pectobacterium carotovorum WPP14 0.77 HER17_RS05410 ATP-dependent chaperone ClpB 0.55 HER17_RS02245 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Dickeya dadantii 3937 0.77 DDA3937_RS16100 ATP-dependent chaperone ClpB 0.58 DDA3937_RS19105 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Serratia liquefaciens MT49 0.77 IAI46_03995 ATP-dependent chaperone ClpB 0.54 IAI46_23245 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS16530 ATP-dependent chaperone ClpB 0.53 PagCFBP13505_RS22555 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Pantoea sp. MT58 0.77 IAI47_04435 ATP-dependent chaperone ClpB 0.52 IAI47_02310 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Rahnella sp. WP5 0.76 EX31_RS07560 ATP-dependent chaperone ClpB 0.56 EX31_RS15955 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Erwinia amylovora T8 0.76 OLJFJH_09740 ATP-dependent chaperone ClpB 0.58 OLJFJH_03690 L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Erwinia tracheiphila HP pepo 2.2 0.76 IJEDHG_26855 clpB ATP-dependent chaperone ClpB 0.55 IJEDHG_12500 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Erwinia tracheiphila SCR3 0.76 LU632_RS16935 clpB ATP-dependent chaperone ClpB 0.55 LU632_RS22450 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC — —
Marinobacter adhaerens HP15 0.74 HP15_529 protein disaggregation chaperone 0.35 HP15_3747 Sua5/YciO/YrdC/YwlC family protein low > 73
Kangiella aquimarina DSM 16071 0.74 B158DRAFT_2535 ATP-dependent chaperone ClpB 0.36 B158DRAFT_0403 Putative translation factor (SUA5) low > 40
Pseudomonas sp. SVBP6 0.72 COO64_RS11065 clpB ATP-dependent chaperone ClpB 0.41 COO64_RS02235 L-threonylcarbamoyladenylate synthase — —
Lysobacter sp. OAE881 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB 0.47 ABIE51_RS02215 Sua5/YciO/YrdC/YwlC family protein — —
Pseudomonas sp. RS175 0.71 PFR28_03746 Chaperone protein ClpB 0.39 PFR28_04658 Threonylcarbamoyl-AMP synthase — —
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5129 ClpB protein 0.39 Pf6N2E2_4126 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA — —
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_15935 ATP-dependent chaperone ClpB 0.39 AO356_11300 tRNA threonylcarbamoyladenosine biosynthesis protein RimN — —
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2824 ClpB protein 0.37 Pf1N1B4_1909 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA — —
Pseudomonas sp. S08-1 0.71 OH686_16420 ATP-dependent chaperone protein ClpB 0.42 OH686_12500 Threonylcarbamoyl-AMP synthase — —
Pseudomonas lactucae CFBP13502 0.71 GEMAOFIL_00971 Chaperone protein ClpB 0.38 GEMAOFIL_00228 Threonylcarbamoyl-AMP synthase — —
Pseudomonas simiae WCS417 0.71 PS417_03830 protein disaggregation chaperone 0.38 PS417_00110 tRNA threonylcarbamoyladenosine biosynthesis protein RimN — —
Pseudomonas aeruginosa PA14 0.71 IKLFDK_00820 Chaperone protein ClpB 0.41 IKLFDK_25450 Threonylcarbamoyl-AMP synthase — —
Pseudomonas fluorescens SBW25 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB 0.39 PFLU_RS00105 tRNA threonylcarbamoyladenosine biosynthesis protein RimN — —
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB 0.39 PFLU_RS00105 tRNA threonylcarbamoyladenosine biosynthesis protein RimN — —
Pseudomonas stutzeri RCH2 0.71 Psest_0711 ATP-dependent chaperone ClpB 0.43 Psest_0026 Putative translation factor (SUA5) — —
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_1495 ClpB protein 0.38 PfGW456L13_647 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA — —
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.1382.1 ClpB protein 0.48 Xcc-8004.4753.1 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.41 Psyr_0022 translation factor SUA5 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.41 Psyr_0022 translation factor SUA5 — —
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_14230 ATP-dependent chaperone ClpB 0.39 AO353_10655 tRNA threonylcarbamoyladenosine biosynthesis protein RimN — —
Pseudomonas sp. BP01 0.70 JOY50_RS27140 clpB ATP-dependent chaperone ClpB 0.42 JOY50_RS08230 L-threonylcarbamoyladenylate synthase — —
Pseudomonas sp. DMC3 0.70 GFF4006 Chaperone protein ClpB 0.39 GFF595 Threonylcarbamoyl-AMP synthase — —
Pseudomonas putida KT2440 0.70 PP_0625 Chaperone protein ClpB 0.42 PP_0070 Threonylcarbamoyl-AMP synthase — —
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB 0.42 ABZR86_RS13860 Sua5/YciO/YrdC/YwlC family protein — —
Pseudomonas segetis P6 0.70 MPMX49_03920 Chaperone protein ClpB 0.38 MPMX49_00278 Threonylcarbamoyl-AMP synthase — —
Rhodanobacter denitrificans MT42 0.69 LRK55_RS04735 ATP-dependent chaperone ClpB 0.41 LRK55_RS09795 Sua5/YciO/YrdC/YwlC family protein — —
Rhodanobacter sp000427505 FW510-R12 0.69 LRK53_RS05055 ATP-dependent chaperone ClpB 0.41 LRK53_RS02935 Sua5/YciO/YrdC/YwlC family protein — —
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_01800 clpB ATP-dependent chaperone ClpB 0.41 OKGIIK_13760 Threonylcarbamoyl-AMP synthase — —
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB 0.41 LRK54_RS10155 Sua5/YciO/YrdC/YwlC family protein — —
Acinetobacter radioresistens SK82 0.64 MPMX26_01096 Chaperone protein ClpB 0.31 MPMX26_00113 Threonylcarbamoyl-AMP synthase — —
Acinetobacter baumannii LAC-4 0.63 RR41_RS10060 ATP-dependent chaperone ClpB 0.33 RR41_RS18090 threonylcarbamoyl-AMP synthase — —
Synechococcus elongatus PCC 7942 0.55 Synpcc7942_1089 clpB ATPase 0.18 Synpcc7942_1864 hypothetical protein — —
Bacteroides stercoris CC31F 0.53 HMPREF1181_RS11960 ATP-dependent chaperone ClpB 0.23 HMPREF1181_RS06520 threonylcarbamoyl-AMP synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.53 ABZR88_RS10630 ATP-dependent chaperone ClpB 0.24 ABZR88_RS17455 L-threonylcarbamoyladenylate synthase — —
Bacteroides ovatus ATCC 8483 0.53 BACOVA_05393 ATP-dependent chaperone protein ClpB 0.24 BACOVA_01200 Sua5/YciO/YrdC/YwlC family protein — —
Bacteroides thetaiotaomicron VPI-5482 0.52 BT4597 endopeptidase Clp ATP-binding chain B (NCBI ptt file) 0.23 BT3943 conserved hypothetical protein, putative translation factor (NCBI ptt file) — —
Parabacteroides merdae CL09T00C40 0.52 HMPREF1078_RS00500 ATP-dependent chaperone ClpB 0.26 HMPREF1078_RS07710 L-threonylcarbamoyladenylate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_14135 ATP-dependent chaperone ClpB 0.25 CA264_11045 threonylcarbamoyl-AMP synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.51 CA265_RS12775 ATP-dependent chaperone ClpB 0.25 CA265_RS02975 threonylcarbamoyl-AMP synthase — —
Phocaeicola dorei CL03T12C01 0.51 ABI39_RS18885 ATP-dependent chaperone ClpB 0.24 ABI39_RS00255 threonylcarbamoyl-AMP synthase — —
Phocaeicola vulgatus CL09T03C04 0.51 HMPREF1058_RS04980 ATP-dependent chaperone ClpB 0.24 HMPREF1058_RS07740 threonylcarbamoyl-AMP synthase — —

Not shown: 43 genomes with orthologs for CSW01_03705 only; 0 genomes with orthologs for CSW01_00270 only